; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021724 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021724
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon protein, putative, unclassified
Genome locationchr7:11191699..11193633
RNA-Seq ExpressionLag0021724
SyntenyLag0021724
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAX92970.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]8.7e-2627.73Show/hide
Query:  IEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLINDNLKGRKVSSP
        ++      + + +V+F   YLG  +   +     F  +++++WK +    +      GKE ++KAV+Q + VY M  F    K P  + D+L        
Subjt:  IEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLINDNLKGRKVSSP

Query:  IDERNRWIEA-KVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILN
           RN W  A K R                      D + W  D+ G F+V+SAYHLALSL   A +S+S    ++K+W  LW  K   +VK   WK  +
Subjt:  IDERNRWIEA-KVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILN

Query:  DVIPTCSNLIKKGLDINYLCDSRP-----IPPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKP
        + +PT  N  K+ L+ + +C  +P      P      LN+D S+++S  +G +G I+R++ GS+I S    I  E     LEA  +     I+  L    
Subjt:  DVIPTCSNLIKKGLDINYLCDSRP-----IPPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKP

Query:  PKIVVYSNCLEIINLLNCMDENLIEIKNVADAILELAGSLGEVSFFHCPREQNCVAH
          I + ++ LE +NL    +    E+ ++   I EL     E++     R QN V+H
Subjt:  PKIVVYSNCLEIINLLNCMDENLIEIKNVADAILELAGSLGEVSFFHCPREQNCVAH

EEC68026.1 hypothetical protein OsI_35837 [Oryza sativa Indica Group]2.8e-3228.93Show/hide
Query:  IEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLINDNLKGRKVSSP
        ++      + + +V+F   YLG  +   +     F  +++++WK +    +   S  GKE ++KAV+Q + VY M  F+         + + +   VS  
Subjt:  IEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLINDNLKGRKVSSP

Query:  IDERNRWIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILND
        I     W   ++   F P DA  ILNI L      D + W  D+ G F+V+SAYHLALSL   A +S+S    ++K+W  LW  K   +VK   WK  ++
Subjt:  IDERNRWIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILND

Query:  VIPTCSNLIKKGLDINYLCDSRP-----IPPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKPP
         +PT  N  K+ L+ + +C  +P      P      LN+D S+++S  +G +G I+R++ GS+I S    I  E     LEA  +     I+  L     
Subjt:  VIPTCSNLIKKGLDINYLCDSRP-----IPPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKPP

Query:  KIVVYSNCLEIINLLNCMDENLIEIKNVADAILELAGSLGEVSFFHCPREQNCVAH
         I + ++CLE +NL    +    E+ ++   I EL     E++     R Q+ V+H
Subjt:  KIVVYSNCLEIINLLNCMDENLIEIKNVADAILELAGSLGEVSFFHCPREQNCVAH

XP_018852850.1 uncharacterized protein LOC109014810 [Juglans regia]5.1e-2630.03Show/hide
Query:  KDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLI------------NDNLK----GR------KVSSPIDERNRWIE-AKVRDHFPPHDAIDILN
        K  +FS  GKE L+KAV   I  Y MS F+  SK    I            ND  K    GR      +V S ID   +W    KVR  F P     IL 
Subjt:  KDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLI------------NDNLK----GR------KVSSPIDERNRWIE-AKVRDHFPPHDAIDILN

Query:  IPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILNDVIPTCSNLIKKGLDINYLCDSRPI--
        +     +  D  +W  ++ G F+VKSAY L  S + E+   TS     KK W  LW +K   +VK   W++  +++P  +N + K +DI   C S+ +  
Subjt:  IPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILNDVIPTCSNLIKKGLDINYLCDSRPI--

Query:  ----PPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKPPKIVVYSNCLEIINLLNCMDENLIEI
            PPA+ + LN D +    + +  +G I+RDS G L  + S+  +E   ++I+EA  +  GL+   N+  +   + + S+C  ++  +N    + I +
Subjt:  ----PPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKPPKIVVYSNCLEIINLLNCMDENLIEI

Query:  KNVADAILELAGSLGEVSFFHCPREQNCVAHSI
        + +   I  L  S G+  F HC R  N   H +
Subjt:  KNVADAILELAGSLGEVSFFHCPREQNCVAHSI

XP_023876230.1 uncharacterized protein LOC111988681 [Quercus suber]6.2e-2429.37Show/hide
Query:  SKNVGRVIEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASS----KTPTLIN
        S N    I      + G   +    +YLG+ S   ++K   FA++K +V   L   K+KL S  GKE LIKAV Q +  YTMS F+  +    +   ++ 
Subjt:  SKNVGRVIEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASS----KTPTLIN

Query:  D--------------------------NLKGRKVSSPID-ERNRWIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSL-A
        D                          +L+G KV   ID  + +W E  +R  F P DA  IL+I L     RD++IW+ +K GKFTV+S Y LA  + +
Subjt:  D--------------------------NLKGRKVSSPID-ERNRWIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSL-A

Query:  GEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILNDVIPTCSNLIKKGLDINYLCDSRPIPPADCWNL-----NVDASWNSSE
              +S+   +K+ W+ LWN+    ++K   WK   +++ T  NL K+ +  + +C++    P    +L      V   W+SS+
Subjt:  GEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILNDVIPTCSNLIKKGLDINYLCDSRPIPPADCWNL-----NVDASWNSSE

XP_023923926.1 uncharacterized protein LOC112035327 [Quercus suber]2.0e-2225.94Show/hide
Query:  SKNVGRVIEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFR--------------
        S N    ++ +  +I+GVP++     YLG+ +   + K + F  +K++VWK LQ  K+KL S  GKE LIKAV+Q I  YTMS F+              
Subjt:  SKNVGRVIEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFR--------------

Query:  ----------------------------------------------------------ASSKTPTLINDN-LKGR----------------KVSSPIDER
                                                                   + +   +  D  L GR                KVSS ID  
Subjt:  ----------------------------------------------------------ASSKTPTLINDN-LKGR----------------KVSSPIDER

Query:  N-RWIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILNDVIP
        +  W    V+  F PH+   IL IPL      D+IIW+    GK+T  SAY L +S    + A  SD    KK WK +W ++   +++  VW+I N+ +P
Subjt:  N-RWIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILNDVIP

Query:  TCSNLIKKGLDINYLCDSRPIPPADC------------W-----------NLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEA
        T  NL ++ +  +  C    I P D             W            +N DA+   S     +G I R+  G  + + S  I    S+  LEA
Subjt:  TCSNLIKKGLDINYLCDSRPIPPADC------------W-----------NLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEA

TrEMBL top hitse value%identityAlignment
A0A2I4H9M5 uncharacterized protein LOC1090148102.5e-2630.03Show/hide
Query:  KDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLI------------NDNLK----GR------KVSSPIDERNRWIE-AKVRDHFPPHDAIDILN
        K  +FS  GKE L+KAV   I  Y MS F+  SK    I            ND  K    GR      +V S ID   +W    KVR  F P     IL 
Subjt:  KDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLI------------NDNLK----GR------KVSSPIDERNRWIE-AKVRDHFPPHDAIDILN

Query:  IPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILNDVIPTCSNLIKKGLDINYLCDSRPI--
        +     +  D  +W  ++ G F+VKSAY L  S + E+   TS     KK W  LW +K   +VK   W++  +++P  +N + K +DI   C S+ +  
Subjt:  IPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILNDVIPTCSNLIKKGLDINYLCDSRPI--

Query:  ----PPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKPPKIVVYSNCLEIINLLNCMDENLIEI
            PPA+ + LN D +    + +  +G I+RDS G L  + S+  +E   ++I+EA  +  GL+   N+  +   + + S+C  ++  +N    + I +
Subjt:  ----PPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKPPKIVVYSNCLEIINLLNCMDENLIEI

Query:  KNVADAILELAGSLGEVSFFHCPREQNCVAHSI
        + +   I  L  S G+  F HC R  N   H +
Subjt:  KNVADAILELAGSLGEVSFFHCPREQNCVAHSI

A0A803Q3X2 Uncharacterized protein8.5e-2733.72Show/hide
Query:  KNVGRVIEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPT--------
        +NV R    +    +GV  V   G YLG+ S   +NK +   ++K+KVW  ++  K  +FS+ GKE LIKAVVQ I  YTMS FR S KT +        
Subjt:  KNVGRVIEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPT--------

Query:  ----------LINDNLKGRKVSSPIDER----------------NRWIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSL
                  ++ D    R V+  I ++                 RW E+ +   F   DA  IL++P       DKI+W   K G++TVKS Y +A SL
Subjt:  ----------LINDNLKGRKVSSPIDER----------------NRWIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSL

Query:  AGEADASTSDKCMIKKSW-KSLWNIKTIPRVKTCVWKILNDVIPTCSNLIKKGLDINYLCD
          E    ++DK ++   W K+LW  K  P++K  VWK+  + IPT   L K+G+ +N  C+
Subjt:  AGEADASTSDKCMIKKSW-KSLWNIKTIPRVKTCVWKILNDVIPTCSNLIKKGLDINYLCD

B8BK40 Uncharacterized protein1.3e-3228.93Show/hide
Query:  IEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLINDNLKGRKVSSP
        ++      + + +V+F   YLG  +   +     F  +++++WK +    +   S  GKE ++KAV+Q + VY M  F+         + + +   VS  
Subjt:  IEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLINDNLKGRKVSSP

Query:  IDERNRWIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILND
        I     W   ++   F P DA  ILNI L      D + W  D+ G F+V+SAYHLALSL   A +S+S    ++K+W  LW  K   +VK   WK  ++
Subjt:  IDERNRWIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILND

Query:  VIPTCSNLIKKGLDINYLCDSRP-----IPPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKPP
         +PT  N  K+ L+ + +C  +P      P      LN+D S+++S  +G +G I+R++ GS+I S    I  E     LEA  +     I+  L     
Subjt:  VIPTCSNLIKKGLDINYLCDSRP-----IPPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKPP

Query:  KIVVYSNCLEIINLLNCMDENLIEIKNVADAILELAGSLGEVSFFHCPREQNCVAH
         I + ++CLE +NL    +    E+ ++   I EL     E++     R Q+ V+H
Subjt:  KIVVYSNCLEIINLLNCMDENLIEIKNVADAILELAGSLGEVSFFHCPREQNCVAH

Q2R6V8 Retrotransposon protein, putative, unclassified4.2e-2627.73Show/hide
Query:  IEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLINDNLKGRKVSSP
        ++      + + +V+F   YLG  +   +     F  +++++WK +    +      GKE ++KAV+Q + VY M  F    K P  + D+L        
Subjt:  IEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLINDNLKGRKVSSP

Query:  IDERNRWIEA-KVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILN
           RN W  A K R                      D + W  D+ G F+V+SAYHLALSL   A +S+S    ++K+W  LW  K   +VK   WK  +
Subjt:  IDERNRWIEA-KVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILN

Query:  DVIPTCSNLIKKGLDINYLCDSRP-----IPPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKP
        + +PT  N  K+ L+ + +C  +P      P      LN+D S+++S  +G +G I+R++ GS+I S    I  E     LEA  +     I+  L    
Subjt:  DVIPTCSNLIKKGLDINYLCDSRP-----IPPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKP

Query:  PKIVVYSNCLEIINLLNCMDENLIEIKNVADAILELAGSLGEVSFFHCPREQNCVAH
          I + ++ LE +NL    +    E+ ++   I EL     E++     R QN V+H
Subjt:  PKIVVYSNCLEIINLLNCMDENLIEIKNVADAILELAGSLGEVSFFHCPREQNCVAH

Q53MP1 Retrotransposon protein, putative, unclassified4.2e-2627.73Show/hide
Query:  IEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLINDNLKGRKVSSP
        ++      + + +V+F   YLG  +   +     F  +++++WK +    +      GKE ++KAV+Q + VY M  F    K P  + D+L        
Subjt:  IEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLINDNLKGRKVSSP

Query:  IDERNRWIEA-KVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILN
           RN W  A K R                      D + W  D+ G F+V+SAYHLALSL   A +S+S    ++K+W  LW  K   +VK   WK  +
Subjt:  IDERNRWIEA-KVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILN

Query:  DVIPTCSNLIKKGLDINYLCDSRP-----IPPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKP
        + +PT  N  K+ L+ + +C  +P      P      LN+D S+++S  +G +G I+R++ GS+I S    I  E     LEA  +     I+  L    
Subjt:  DVIPTCSNLIKKGLDINYLCDSRP-----IPPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKP

Query:  PKIVVYSNCLEIINLLNCMDENLIEIKNVADAILELAGSLGEVSFFHCPREQNCVAH
          I + ++ LE +NL    +    E+ ++   I EL     E++     R QN V+H
Subjt:  PKIVVYSNCLEIINLLNCMDENLIEIKNVADAILELAGSLGEVSFFHCPREQNCVAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.4e-0526.52Show/hide
Query:  PPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKPPKIVVYSNCLEIINLLNCMDENLIEIKNVA
        PP      N DA+W     R  +GWI+R+  G ++   ++ +    +  +LEA        +L        +I+  S+   ++NLLN  D+    ++   
Subjt:  PPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKPPKIVVYSNCLEIINLLNCMDENLIEIKNVA

Query:  DAILELAGSLGEVSFFHCPREQNCVAHSIELE
        + I +L     EV F   PR  N VA  I  E
Subjt:  DAILELAGSLGEVSFFHCPREQNCVAHSIELE

AT3G09510.1 Ribonuclease H-like superfamily protein3.7e-0626.27Show/hide
Query:  WIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWK-----SLWNIKTIPRVKTCVWKILNDV
        W ++K+       D   I  I L      DKIIW+ +  G++TV+S Y L        D ST+   +            +WN+  +P++K  +W+ L+  
Subjt:  WIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWK-----SLWNIKTIPRVKTCVWKILNDV

Query:  IPTCSNLIKKGLDINYLC
        + T   L  +G+ I+  C
Subjt:  IPTCSNLIKKGLDINYLC

AT4G29090.1 Ribonuclease H-like superfamily protein1.1e-0527.46Show/hide
Query:  PPADCW-NLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTI-WAGLKILDNLSGKPPKIVVY-SNCLEIINLLNCMDENLIEIK
        PP   W   N DA+WN    R  +GW++R+  G +    ++ + +  S+   E   + WA L    +LS      V++ S+   +I +LN  DE    +K
Subjt:  PPADCW-NLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTI-WAGLKILDNLSGKPPKIVVY-SNCLEIINLLNCMDENLIEIK

Query:  NVADAILELAGSLGEVSFFHCPREQNCVAHSIELECGDYLPF
             +  L     EV F   PRE N +A  +  E   +L +
Subjt:  NVADAILELAGSLGEVSFFHCPREQNCVAHSIELECGDYLPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGCAAAAACGTGGGAAGGGTGATCGAAGCAAAGTGCGGGAAGATCATTGGAGTTCCTAGTGTCAATTTCCTTGGGAATTATTTAGGGATGTCATCAGCCAACAG
TAAAAACAAAAACAAATTATTCGCTAGGGTCAAAGATAAGGTCTGGAAAGTGCTTCAATCGAGGAAAGATAAATTATTCTCTATAGTCGGCAAAGAAACTTTGATCAAAG
CAGTGGTGCAAACAATCCTCGTGTACACTATGAGTTATTTCAGAGCGAGCTCGAAAACTCCTACTCTAATCAACGACAATCTAAAGGGGAGAAAAGTGAGCAGCCCGATC
GATGAAAGAAACAGATGGATTGAAGCCAAAGTGAGAGACCATTTCCCCCCTCATGATGCCATAGATATTCTTAACATCCCGCTTGGAGATGGGAATTCGAGGGACAAGAT
AATCTGGAGTTCAGACAAGCAAGGAAAATTCACAGTGAAGAGTGCCTATCATTTGGCTTTATCTTTAGCAGGGGAAGCAGATGCATCGACCTCGGACAAGTGCATGATAA
AGAAGAGCTGGAAGAGTCTTTGGAACATCAAGACCATCCCAAGGGTCAAAACTTGCGTTTGGAAAATTCTTAATGACGTTATTCCTACTTGCTCTAATCTCATAAAAAAA
GGCCTCGACATTAACTATTTGTGTGATTCAAGGCCAATTCCGCCGGCAGACTGTTGGAATCTGAACGTTGATGCATCATGGAATTCATCAGAAGGTAGGGGCGTCCTGGG
CTGGATTGTTCGAGACTCCGGAGGTTCTCTCATATGTTCATGTTCAAAACTAATCAAAGAGGAATGGTCGATGAAGATCTTGGAGGCCAATACGATTTGGGCGGGGCTTA
AAATTCTAGATAATTTATCTGGGAAGCCACCAAAGATAGTTGTGTACTCTAATTGTCTGGAGATCATCAATCTTCTGAATTGCATGGATGAGAACCTTATAGAGATCAAG
AATGTTGCAGACGCCATCCTCGAGTTGGCTGGTTCTCTGGGAGAGGTCTCTTTCTTCCATTGCCCTAGAGAGCAAAATTGTGTTGCTCATTCGATTGAGCTAGAGTGCGG
GGATTACCTGCCTTTTTTTGGGTTTTTCGGGGCAGGAGCTCCCTTCCACGCTAAAGGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAGCAAAAACGTGGGAAGGGTGATCGAAGCAAAGTGCGGGAAGATCATTGGAGTTCCTAGTGTCAATTTCCTTGGGAATTATTTAGGGATGTCATCAGCCAACAG
TAAAAACAAAAACAAATTATTCGCTAGGGTCAAAGATAAGGTCTGGAAAGTGCTTCAATCGAGGAAAGATAAATTATTCTCTATAGTCGGCAAAGAAACTTTGATCAAAG
CAGTGGTGCAAACAATCCTCGTGTACACTATGAGTTATTTCAGAGCGAGCTCGAAAACTCCTACTCTAATCAACGACAATCTAAAGGGGAGAAAAGTGAGCAGCCCGATC
GATGAAAGAAACAGATGGATTGAAGCCAAAGTGAGAGACCATTTCCCCCCTCATGATGCCATAGATATTCTTAACATCCCGCTTGGAGATGGGAATTCGAGGGACAAGAT
AATCTGGAGTTCAGACAAGCAAGGAAAATTCACAGTGAAGAGTGCCTATCATTTGGCTTTATCTTTAGCAGGGGAAGCAGATGCATCGACCTCGGACAAGTGCATGATAA
AGAAGAGCTGGAAGAGTCTTTGGAACATCAAGACCATCCCAAGGGTCAAAACTTGCGTTTGGAAAATTCTTAATGACGTTATTCCTACTTGCTCTAATCTCATAAAAAAA
GGCCTCGACATTAACTATTTGTGTGATTCAAGGCCAATTCCGCCGGCAGACTGTTGGAATCTGAACGTTGATGCATCATGGAATTCATCAGAAGGTAGGGGCGTCCTGGG
CTGGATTGTTCGAGACTCCGGAGGTTCTCTCATATGTTCATGTTCAAAACTAATCAAAGAGGAATGGTCGATGAAGATCTTGGAGGCCAATACGATTTGGGCGGGGCTTA
AAATTCTAGATAATTTATCTGGGAAGCCACCAAAGATAGTTGTGTACTCTAATTGTCTGGAGATCATCAATCTTCTGAATTGCATGGATGAGAACCTTATAGAGATCAAG
AATGTTGCAGACGCCATCCTCGAGTTGGCTGGTTCTCTGGGAGAGGTCTCTTTCTTCCATTGCCCTAGAGAGCAAAATTGTGTTGCTCATTCGATTGAGCTAGAGTGCGG
GGATTACCTGCCTTTTTTTGGGTTTTTCGGGGCAGGAGCTCCCTTCCACGCTAAAGGGAGATGA
Protein sequenceShow/hide protein sequence
MTSKNVGRVIEAKCGKIIGVPSVNFLGNYLGMSSANSKNKNKLFARVKDKVWKVLQSRKDKLFSIVGKETLIKAVVQTILVYTMSYFRASSKTPTLINDNLKGRKVSSPI
DERNRWIEAKVRDHFPPHDAIDILNIPLGDGNSRDKIIWSSDKQGKFTVKSAYHLALSLAGEADASTSDKCMIKKSWKSLWNIKTIPRVKTCVWKILNDVIPTCSNLIKK
GLDINYLCDSRPIPPADCWNLNVDASWNSSEGRGVLGWIVRDSGGSLICSCSKLIKEEWSMKILEANTIWAGLKILDNLSGKPPKIVVYSNCLEIINLLNCMDENLIEIK
NVADAILELAGSLGEVSFFHCPREQNCVAHSIELECGDYLPFFGFFGAGAPFHAKGR