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Lag0021744 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021744
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:11374614..11376485
RNA-Seq ExpressionLag0021744
SyntenyLag0021744
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019175595.1 PREDICTED: uncharacterized protein LOC109170919 [Ipomoea nil]9.6e-1031.89Show/hide
Query:  LVIMEALWLSVNLKAYLRQAEEPSESRSVEE--PPPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQ
        L++  AL L  N K    + + P+   + EE   PP     KLN+D + + ++G  G+GWVVRD +G+L+         ++D+   +A++I E ++ VK 
Subjt:  LVIMEALWLSVNLKAYLRQAEEPSESRSVEE--PPPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQ

Query:  TCIDLQCDLDVESDSKVVIEAINDISEDLSEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRASSSSASVDNFFDSDQD
          +D    +DVE+DS++V  A++  S + S  S IID +    S ++ V+F   +R +N  AH +AR   S S +      SD D
Subjt:  TCIDLQCDLDVESDSKVVIEAINDISEDLSEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRASSSSASVDNFFDSDQD

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]2.1e-1234.56Show/hide
Query:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQC-DLDVESDSKVVIEAINDISEDLSEVS
        PP SN+WKLN++A+W  ++  GG+GW++RD  G +I    +  +   +I+ LE MAI EG+  ++Q      C  + +ESDS   I  ++   +D +E+ 
Subjt:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQC-DLDVESDSKVVIEAINDISEDLSEVS

Query:  NIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA
         +++ I      +  V   H  RE+N +AH +ARRA
Subjt:  NIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.7e-1133.82Show/hide
Query:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAINDISEDLSEVSN
        PPP + W LN+DASW +++ +GG+GW++R   G ++  G +  +   ++  LEA AILEG+     T + +   L +E+DS  V   +N   EDL++   
Subjt:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAINDISEDLSEVSN

Query:  IIDLINSTTSGLRSVIFWHCKRESNALAHCVARRAS
        +++ I +       + F    RE+N  AH +A+RAS
Subjt:  IIDLINSTTSGLRSVIFWHCKRESNALAHCVARRAS

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]3.2e-1335Show/hide
Query:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQT-CIDLQCD----LDVESDSKVVIEAINDISEDL
        PP SN+WKLN+DA+W  ++  GG+GW++RD  G +I    +  +   +I+ LE MAI EG+  ++Q  C  +Q +    + +ESDS   I  ++   +D 
Subjt:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQT-CIDLQCD----LDVESDSKVVIEAINDISEDL

Query:  SEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA
        +E+  +++ I      ++ V   H  RE+N +AH +ARRA
Subjt:  SEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA

XP_030969974.1 uncharacterized protein LOC115990267 [Quercus lobata]1.3e-0932.89Show/hide
Query:  QAEEPSESRSVEEPPPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIE
        +A+ P E  +++  PPP   +K N D +  + S + G+G VVRDS G ++    ++     D   +EA+AI   I    +T  +    + +ESDS  V++
Subjt:  QAEEPSESRSVEEPPPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIE

Query:  AINDISEDLSEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA
        AI D +E    + NII+ +   +  ++S  F H KRE+N +AH +AR A
Subjt:  AINDISEDLSEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA

TrEMBL top hitse value%identityAlignment
A0A5B7BU49 RNase H domain-containing protein (Fragment)1.9e-1140.15Show/hide
Query:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAINDISEDLSEVSN
        PP    +KLN  ASW+     GG+G V+RD  G +I G  KQ +    I   EA+AIL G+   K   + LQ DL VE D   V+ AI    EDLSE+ +
Subjt:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAINDISEDLSEVSN

Query:  IIDLINSTTSGLRSVIFWHCKRESNALAHCVA
        + D I     G  S  F H +R +N++AH +A
Subjt:  IIDLINSTTSGLRSVIFWHCKRESNALAHCVA

A0A6J1CP26 uncharacterized protein LOC1110134121.0e-1234.56Show/hide
Query:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQC-DLDVESDSKVVIEAINDISEDLSEVS
        PP SN+WKLN++A+W  ++  GG+GW++RD  G +I    +  +   +I+ LE MAI EG+  ++Q      C  + +ESDS   I  ++   +D +E+ 
Subjt:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQC-DLDVESDSKVVIEAINDISEDLSEVS

Query:  NIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA
         +++ I      +  V   H  RE+N +AH +ARRA
Subjt:  NIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA

A0A6J1D5W1 uncharacterized protein LOC1110173297.9e-1034.33Show/hide
Query:  PSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAINDISEDLSEVSNII
        P N WKLN+DA+W  N G GGLGW++R+    +   G +      DI+ LE MAI  GI  V  +       L +ES+S   I  I  I ++++E+  ++
Subjt:  PSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAINDISEDLSEVSNII

Query:  DLINSTTSGLRSVIFWHCKRESNALAHCVARRAS
          I +     R   F H +R+ N++A  +A RA+
Subjt:  DLINSTTSGLRSVIFWHCKRESNALAHCVARRAS

A0A6J1DNV9 uncharacterized protein LOC1110224038.5e-1233.82Show/hide
Query:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAINDISEDLSEVSN
        PPP + W LN+DASW +++ +GG+GW++R   G ++  G +  +   ++  LEA AILEG+     T + +   L +E+DS  V   +N   EDL++   
Subjt:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAINDISEDLSEVSN

Query:  IIDLINSTTSGLRSVIFWHCKRESNALAHCVARRAS
        +++ I +       + F    RE+N  AH +A+RAS
Subjt:  IIDLINSTTSGLRSVIFWHCKRESNALAHCVARRAS

A0A6J1DSV1 uncharacterized protein LOC1110236081.5e-1335Show/hide
Query:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQT-CIDLQCD----LDVESDSKVVIEAINDISEDL
        PP SN+WKLN+DA+W  ++  GG+GW++RD  G +I    +  +   +I+ LE MAI EG+  ++Q  C  +Q +    + +ESDS   I  ++   +D 
Subjt:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQT-CIDLQCD----LDVESDSKVVIEAINDISEDL

Query:  SEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA
        +E+  +++ I      ++ V   H  RE+N +AH +ARRA
Subjt:  SEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein4.4e-0532.61Show/hide
Query:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDV-ESDSKVVIEAINDISEDLSEVS
        PPP    K N+DA+W  ++ + G+GWV+R+  G +   G +   K    S LEA   LE +     +    Q +  + ESDS+V+IE +N+  E    + 
Subjt:  PPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDV-ESDSKVVIEAINDISEDLSEVS

Query:  NIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRASS
          I  +    S    V F    RE N LA  VAR + S
Subjt:  NIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRASS

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-0429.25Show/hide
Query:  SRSVEEPPPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGM-----KQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAI
        SR+ +  PP  +  K N DAS  E +   GLGW++R+S G++I  GM     + T +  + STL   AI        +  I        E D++ +   I
Subjt:  SRSVEEPPPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGM-----KQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAI

Query:  NDISEDLSEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA
        N  S +   + + +D I S      S+ F    RE N  A  +A++A
Subjt:  NDISEDLSEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACACGGGTTAGAGTGGTTCGGCAACAGAGGCCTACATCCACTATGGAGGGAGTGTCGATCTTATTAAGGCGACGGAGAGCTCTTGTGATCATGGAAGCTCTGTG
GCTTTCTGTGAATCTGAAAGCTTACCTGCGTCAAGCTGAGGAGCCTAGCGAGTCACGATCCGTGGAAGAACCCCCCCCCCCCTCGAACGCGTGGAAATTGAACTCGGATG
CTTCTTGGCTCGAAAATTCTGGGCAAGGAGGCTTGGGATGGGTGGTTCGTGACTCTTTAGGATCCTTGATCTGCGGTGGCATGAAACAAACGAAGAAAAATTGGGACATC
AGTACTCTCGAAGCCATGGCAATACTGGAAGGGATCAATTGTGTAAAGCAAACCTGCATTGATTTGCAATGCGATTTAGATGTGGAATCAGACTCCAAAGTCGTTATCGA
GGCAATTAATGACATCTCTGAAGACCTTTCAGAGGTCAGCAACATCATCGACCTGATCAATTCTACTACTTCAGGTCTCCGATCGGTGATTTTTTGGCACTGCAAGAGGG
AATCCAACGCACTAGCCCATTGCGTTGCCCGACGTGCTTCTTCTTCTTCTGCTAGTGTGGATAATTTTTTTGATTCTGATCAGGACGCTACCCCTTCGAGGGAGTTGGGC
AGTATATTTTGGGCGCCTGTTTTACCGCGTTGGATTTTGCCCCTCATTGATGAGGGTAGTTATGGTTCTGGTGTTAATTTGCTTTCCGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACACACGGGTTAGAGTGGTTCGGCAACAGAGGCCTACATCCACTATGGAGGGAGTGTCGATCTTATTAAGGCGACGGAGAGCTCTTGTGATCATGGAAGCTCTGTG
GCTTTCTGTGAATCTGAAAGCTTACCTGCGTCAAGCTGAGGAGCCTAGCGAGTCACGATCCGTGGAAGAACCCCCCCCCCCCTCGAACGCGTGGAAATTGAACTCGGATG
CTTCTTGGCTCGAAAATTCTGGGCAAGGAGGCTTGGGATGGGTGGTTCGTGACTCTTTAGGATCCTTGATCTGCGGTGGCATGAAACAAACGAAGAAAAATTGGGACATC
AGTACTCTCGAAGCCATGGCAATACTGGAAGGGATCAATTGTGTAAAGCAAACCTGCATTGATTTGCAATGCGATTTAGATGTGGAATCAGACTCCAAAGTCGTTATCGA
GGCAATTAATGACATCTCTGAAGACCTTTCAGAGGTCAGCAACATCATCGACCTGATCAATTCTACTACTTCAGGTCTCCGATCGGTGATTTTTTGGCACTGCAAGAGGG
AATCCAACGCACTAGCCCATTGCGTTGCCCGACGTGCTTCTTCTTCTTCTGCTAGTGTGGATAATTTTTTTGATTCTGATCAGGACGCTACCCCTTCGAGGGAGTTGGGC
AGTATATTTTGGGCGCCTGTTTTACCGCGTTGGATTTTGCCCCTCATTGATGAGGGTAGTTATGGTTCTGGTGTTAATTTGCTTTCCGTTTAG
Protein sequenceShow/hide protein sequence
MNTRVRVVRQQRPTSTMEGVSILLRRRRALVIMEALWLSVNLKAYLRQAEEPSESRSVEEPPPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDI
STLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAINDISEDLSEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRASSSSASVDNFFDSDQDATPSRELG
SIFWAPVLPRWILPLIDEGSYGSGVNLLSV