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Lag0021751 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021751
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr7:11471917..11473233
RNA-Seq ExpressionLag0021751
SyntenyLag0021751
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW56403.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]9.1e-0546.99Show/hide
Query:  TSGLPFFFVNPS----TPFYPAPQPSTSPYPTLTPPLNIKLTDNNYLLSKNQLLNHIIAFDMECLFNG-TPVPLKFLDVAQIQ
        TS L    +NP     TP + +P  + + YP+L+ PL IKL + N  L KNQLLN IIA  +E    G TP+P KFLD AQ+Q
Subjt:  TSGLPFFFVNPS----TPFYPAPQPSTSPYPTLTPPLNIKLTDNNYLLSKNQLLNHIIAFDMECLFNG-TPVPLKFLDVAQIQ
XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]1.8e-0547.56Show/hide
Query:  PAPTSGLPFFFVNPSTPFYPAPQPSTSPYPTLTPPLNIKLTDNNYLLSKNQLLNHIIAFDMECLFNGTPV-PLKFLDVAQIQ
        P PT   P F   P  PF      S +P+PTL  PLN+KL DNN+LL KNQLLN +IA  +    +GT + P +FLD  Q+Q
Subjt:  PAPTSGLPFFFVNPSTPFYPAPQPSTSPYPTLTPPLNIKLTDNNYLLSKNQLLNHIIAFDMECLFNGTPV-PLKFLDVAQIQ
TrEMBL top hitse value%identityAlignment
A0A438F8X3 Retrovirus-related Pol polyprotein from transposon RE14.4e-0546.99Show/hide
Query:  TSGLPFFFVNPS----TPFYPAPQPSTSPYPTLTPPLNIKLTDNNYLLSKNQLLNHIIAFDMECLFNG-TPVPLKFLDVAQIQ
        TS L    +NP     TP + +P  + + YP+L+ PL IKL + N  L KNQLLN IIA  +E    G TP+P KFLD AQ+Q
Subjt:  TSGLPFFFVNPS----TPFYPAPQPSTSPYPTLTPPLNIKLTDNNYLLSKNQLLNHIIAFDMECLFNG-TPVPLKFLDVAQIQ
A0A6J1DQX7 uncharacterized protein LOC1110223158.9e-0647.56Show/hide
Query:  PAPTSGLPFFFVNPSTPFYPAPQPSTSPYPTLTPPLNIKLTDNNYLLSKNQLLNHIIAFDMECLFNGTPV-PLKFLDVAQIQ
        P PT   P F   P  PF      S +P+PTL  PLN+KL DNN+LL KNQLLN +IA  +    +GT + P +FLD  Q+Q
Subjt:  PAPTSGLPFFFVNPSTPFYPAPQPSTSPYPTLTPPLNIKLTDNNYLLSKNQLLNHIIAFDMECLFNGTPV-PLKFLDVAQIQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAATATCAAGCTCTTCATCAGCAAACGATGGCATCTTGCCATCCATCCCAAATCCAAGCACTGTGTTAACTCCGACCGTTACCTCCACCGTATCTTCCCCAAG
CATGACACCCTACCCTCCAGCCCCAACGTCTGGCTTGCCGTTTTTTTTTGTAAATCCTTCAACTCCGTTTTACCCTGCACCACAACCCTCCACCTCCCCCTATCCAACCC
TAACCCCACCATTGAACATCAAGCTCACCGACAACAACTATCTCCTCTCGAAGAATCAACTGCTCAACCATATTATCGCCTTCGACATGGAATGCTTATTCAATGGAACG
CCTGTTCCACTCAAATTTCTCGATGTGGCTCAAATTCAGGAAAAGGGAAAAGACAAGGAGACTGTTGTTTGGAGGATTTCCAGCTTGGGAAAGCTGAAATCTCTCTTGGA
AGCTTCTTCTCTTCTCTTCCTTTCTTTTATTCTTCCTTTCAAAGCTGGAATCTTTCTTGGAAGCTTCTTCTCTTCTCTTCCTTTCTTTTATTCTTCCTTCTCTCAGTGTT
TAGTTGGTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAATATCAAGCTCTTCATCAGCAAACGATGGCATCTTGCCATCCATCCCAAATCCAAGCACTGTGTTAACTCCGACCGTTACCTCCACCGTATCTTCCCCAAG
CATGACACCCTACCCTCCAGCCCCAACGTCTGGCTTGCCGTTTTTTTTTGTAAATCCTTCAACTCCGTTTTACCCTGCACCACAACCCTCCACCTCCCCCTATCCAACCC
TAACCCCACCATTGAACATCAAGCTCACCGACAACAACTATCTCCTCTCGAAGAATCAACTGCTCAACCATATTATCGCCTTCGACATGGAATGCTTATTCAATGGAACG
CCTGTTCCACTCAAATTTCTCGATGTGGCTCAAATTCAGGAAAAGGGAAAAGACAAGGAGACTGTTGTTTGGAGGATTTCCAGCTTGGGAAAGCTGAAATCTCTCTTGGA
AGCTTCTTCTCTTCTCTTCCTTTCTTTTATTCTTCCTTTCAAAGCTGGAATCTTTCTTGGAAGCTTCTTCTCTTCTCTTCCTTTCTTTTATTCTTCCTTCTCTCAGTGTT
TAGTTGGTATTTAA
Protein sequenceShow/hide protein sequence
MASISSSSSANDGILPSIPNPSTVLTPTVTSTVSSPSMTPYPPAPTSGLPFFFVNPSTPFYPAPQPSTSPYPTLTPPLNIKLTDNNYLLSKNQLLNHIIAFDMECLFNGT
PVPLKFLDVAQIQEKGKDKETVVWRISSLGKLKSLLEASSLLFLSFILPFKAGIFLGSFFSSLPFFYSSFSQCLVGI