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Lag0021758 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021758
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon protein
Genome locationchr7:11588068..11588618
RNA-Seq ExpressionLag0021758
SyntenyLag0021758
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035078.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-2749.21Show/hide
Query:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA
        MM +K  GC + +T+ IDC+++ LKR + AI EM G  CSGFGWN+E  C+ AEKE+FD WV+SH VAKGLLNK FP+Y ELT++FG+DR +       A
Subjt:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA

Query:  DMTSSHHVDEEGDFNMGGSPDYYVPV
        DM S+        F+MG   + + P+
Subjt:  DMTSSHHVDEEGDFNMGGSPDYYVPV
KAA0038314.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-2747.24Show/hide
Query:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA
        M+ +K LGC + +T  IDC+++ LKR + AI EM G  CSGFGWN+E  C+ AEKE+FD WV+SH   KGLLNK FP+Y +LT++FG+DR ++      A
Subjt:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA

Query:  DMTSSHHVDEEGDFNMGGSPDYYVPVS
        D+ S+    E   F+MG   + + PV+
Subjt:  DMTSSHHVDEEGDFNMGGSPDYYVPVS
KAA0041588.1 retrotransposon protein [Cucumis melo var. makuwa]4.5e-2849.21Show/hide
Query:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA
        MM +K  GC + +T+ IDC+++ LKR + AIVEM G  CSGFGWN+E  C+ AEKE+FD WV+SH  AKGLLNK FP+Y ELT++FG+DR ++      A
Subjt:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA

Query:  DMTSSHHVDEEGDFNMGGSPDYYVPV
        D+ S+        F+MG   + + PV
Subjt:  DMTSSHHVDEEGDFNMGGSPDYYVPV
KAA0058882.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-2749.21Show/hide
Query:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA
        MM KK  GC + +T+ IDC+++ LKR + AI EM G  CSGFGWN+E  C+ AEKE+FD WV+SH  AKGLLNK FP+Y ELT++FG+DR +       A
Subjt:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA

Query:  DMTSSHHVDEEGDFNMGGSPDYYVPV
        D+ S+        F+MG   + + PV
Subjt:  DMTSSHHVDEEGDFNMGGSPDYYVPV
KAA0064022.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-2850Show/hide
Query:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA
        MM KK  GC + +T+ IDC+++ LKR + AI EM G  CSGFGWN+E  C+ AEKE+FD WV+SH  AKGLLNKSFP+Y ELT++FG+DR +       A
Subjt:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA

Query:  DMTSSHHVDEEGDFNMGGSPDYYVPV
        D+ S+        F+MG   + + PV
Subjt:  DMTSSHHVDEEGDFNMGGSPDYYVPV
TrEMBL top hitse value%identityAlignment
A0A5A7SWU2 Retrotransposon protein4.9e-2849.21Show/hide
Query:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA
        MM +K  GC + +T+ IDC+++ LKR + AI EM G  CSGFGWN+E  C+ AEKE+FD WV+SH VAKGLLNK FP+Y ELT++FG+DR +       A
Subjt:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA

Query:  DMTSSHHVDEEGDFNMGGSPDYYVPV
        DM S+        F+MG   + + P+
Subjt:  DMTSSHHVDEEGDFNMGGSPDYYVPV
A0A5A7T4C3 Retrotransposon protein4.9e-2847.24Show/hide
Query:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA
        M+ +K LGC + +T  IDC+++ LKR + AI EM G  CSGFGWN+E  C+ AEKE+FD WV+SH   KGLLNK FP+Y +LT++FG+DR ++      A
Subjt:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA

Query:  DMTSSHHVDEEGDFNMGGSPDYYVPVS
        D+ S+    E   F+MG   + + PV+
Subjt:  DMTSSHHVDEEGDFNMGGSPDYYVPVS
A0A5A7TFA4 Retrotransposon protein2.2e-2849.21Show/hide
Query:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA
        MM +K  GC + +T+ IDC+++ LKR + AIVEM G  CSGFGWN+E  C+ AEKE+FD WV+SH  AKGLLNK FP+Y ELT++FG+DR ++      A
Subjt:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA

Query:  DMTSSHHVDEEGDFNMGGSPDYYVPV
        D+ S+        F+MG   + + PV
Subjt:  DMTSSHHVDEEGDFNMGGSPDYYVPV
A0A5A7USM3 Retrotransposon protein4.9e-2849.21Show/hide
Query:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA
        MM KK  GC + +T+ IDC+++ LKR + AI EM G  CSGFGWN+E  C+ AEKE+FD WV+SH  AKGLLNK FP+Y ELT++FG+DR +       A
Subjt:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA

Query:  DMTSSHHVDEEGDFNMGGSPDYYVPV
        D+ S+        F+MG   + + PV
Subjt:  DMTSSHHVDEEGDFNMGGSPDYYVPV
A0A5A7V6Q9 Retrotransposon protein1.7e-2850Show/hide
Query:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA
        MM KK  GC + +T+ IDC+++ LKR + AI EM G  CSGFGWN+E  C+ AEKE+FD WV+SH  AKGLLNKSFP+Y ELT++FG+DR +       A
Subjt:  MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPA

Query:  DMTSSHHVDEEGDFNMGGSPDYYVPV
        D+ S+        F+MG   + + PV
Subjt:  DMTSSHHVDEEGDFNMGGSPDYYVPV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.2 unknown protein9.8e-0530Show/hide
Query:  KVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKD
        + + L+R Y  I  +L Q  +GF W+     V A+ ++++ ++++H  A+    K+ P Y  L F+FGK+
Subjt:  KVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKD
AT4G02210.1 unknown protein4.7e-0728.43Show/hide
Query:  KVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPADMTSSHHVDEEGDFNMGGS
        + ++L+RQ+ AI  +L     GF W+ E   V A+  V+  ++K+H  A+  + +  P+YK+L  + G     E  C V  D        E  +F   G+
Subjt:  KVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPADMTSSHHVDEEGDFNMGGS

Query:  PD
         D
Subjt:  PD
AT4G02210.2 unknown protein4.7e-0728.43Show/hide
Query:  KVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPADMTSSHHVDEEGDFNMGGS
        + ++L+RQ+ AI  +L     GF W+ E   V A+  V+  ++K+H  A+  + +  P+YK+L  + G     E  C V  D        E  +F   G+
Subjt:  KVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPADMTSSHHVDEEGDFNMGGS

Query:  PD
         D
Subjt:  PD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGGAAAAAACATCTAGGGTGCACTATTGAGTCCACGTCAACGATAGACTGCAAAGTAAGAGCCTTGAAACGACAGTATGGAGCAATCGTCGAGATGTTGGGTCA
GGGGTGTAGTGGTTTTGGGTGGAATGAGGAGTATATATGTGTCGAAGCTGAGAAAGAAGTGTTCGATGCGTGGGTCAAGTCTCACTTAGTTGCGAAAGGACTCCTAAACA
AGTCATTCCCTCACTACAAGGAATTGACCTTCATGTTCGGTAAAGATCGAACTAGCGAGGTGGGTTGTTCCGTACCAGCTGATATGACCTCAAGCCACCATGTGGATGAA
GAGGGCGACTTCAACATGGGAGGATCGCCAGACTATTATGTCCCAGTGTCACTTGCGTTAATAACGTCGTCAAGGTTGAGTTGGAGGAAGTTCCCGTCACCCCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAGGAAAAAACATCTAGGGTGCACTATTGAGTCCACGTCAACGATAGACTGCAAAGTAAGAGCCTTGAAACGACAGTATGGAGCAATCGTCGAGATGTTGGGTCA
GGGGTGTAGTGGTTTTGGGTGGAATGAGGAGTATATATGTGTCGAAGCTGAGAAAGAAGTGTTCGATGCGTGGGTCAAGTCTCACTTAGTTGCGAAAGGACTCCTAAACA
AGTCATTCCCTCACTACAAGGAATTGACCTTCATGTTCGGTAAAGATCGAACTAGCGAGGTGGGTTGTTCCGTACCAGCTGATATGACCTCAAGCCACCATGTGGATGAA
GAGGGCGACTTCAACATGGGAGGATCGCCAGACTATTATGTCCCAGTGTCACTTGCGTTAATAACGTCGTCAAGGTTGAGTTGGAGGAAGTTCCCGTCACCCCACTAG
Protein sequenceShow/hide protein sequence
MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPADMTSSHHVDE
EGDFNMGGSPDYYVPVSLALITSSRLSWRKFPSPH