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Lag0021766 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021766
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReplication enhancer
Genome locationchr7:11669916..11670941
RNA-Seq ExpressionLag0021766
SyntenyLag0021766
Gene Ontology termsGO:0016032 - viral process (biological process)
InterPro domainsIPR000657 - Geminivirus AL3 coat protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFJ39285.1 replication enhancer protein [Tomato leaf curl Bangladesh virus-[India:Udaipur:Gaillardia:2009]]4.0e-1647.06Show/hide
Query:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV
        S+ EWR YLG+ KS +FQD       +PD  RH+    S+QSQP E  G++QMF +L            FLRVF+ Q  KYL+  GV+S  NVLRAV+HV
Subjt:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV

Query:  MW
        +W
Subjt:  MW

AXE43633.1 REn protein [Croton yellow vein mosaic virus]4.0e-1648.94Show/hide
Query:  GNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLE-IFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMW
        G  K P+FQD  T    +P+  RHN   D++QSQP E  G++QMF  ++  +   +PPTG FLRVFK Q +KYL+ LGV+S   VL++VDHV+W
Subjt:  GNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLE-IFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMW

CAP78911.1 AC3 protein [Ageratum yellow vein virus - [G129]]3.2e-1849.02Show/hide
Query:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV
        S  EWR YL + KSP+FQD      T+    RH+   ++IQ+Q  +  G  Q F + +I+TRL+P T  FLRVF+ QCMKYLD LGV+S  NV+RA +HV
Subjt:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV

Query:  MW
        +W
Subjt:  MW

QUQ60663.1 transcription activator protein [Bitter gourd yellow mosaic virus]2.4e-1341.53Show/hide
Query:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV
        S+ EWR YL   KSP+FQD      +V   T H+   + IQ QP E   +SQ+F NL+           F    +   +KYLDMLGVVS  NV+RAVDHV
Subjt:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV

Query:  MWTCKVGHTQQGPREYYI
        +W   +  T+   R Y I
Subjt:  MWTCKVGHTQQGPREYYI

YP_010087327.1 transcription activator protein [Bitter gourd yellow mosaic virus]2.4e-1341.53Show/hide
Query:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV
        S+ EWR YL   KSP+FQD      +V   T H+   + IQ QP E   +SQ+F NL+           F    +   +KYLDMLGVVS  NV+RAVDHV
Subjt:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV

Query:  MWTCKVGHTQQGPREYYI
        +W   +  T+   R Y I
Subjt:  MWTCKVGHTQQGPREYYI

TrEMBL top hitse value%identityAlignment
A0A2D1P856 Replication enhancer protein3.4e-1341.53Show/hide
Query:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV
        S+ EWR YL   KSP+FQD      +V   T H+   + IQ QP E   +SQ+F NL+           F    +   +KYLDMLGVVS  NV+RAVDHV
Subjt:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV

Query:  MWTCKVGHTQQGPREYYI
        +W   +  T+   R Y I
Subjt:  MWTCKVGHTQQGPREYYI

A0A344V6P6 Replication enhancer1.9e-1648.94Show/hide
Query:  GNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLE-IFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMW
        G  K P+FQD  T    +P+  RHN   D++QSQP E  G++QMF  ++  +   +PPTG FLRVFK Q +KYL+ LGV+S   VL++VDHV+W
Subjt:  GNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLE-IFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMW

A0A3G3ISX9 Replication enhancer protein1.2e-1341.53Show/hide
Query:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV
        S+ EWR YL   KSP+FQD      +V   T H+   + IQ QP E   +SQ+F NL+           F    +   +KYLDMLGVVS  NV+RAVDHV
Subjt:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV

Query:  MWTCKVGHTQQGPREYYI
        +W   +  T+   R Y I
Subjt:  MWTCKVGHTQQGPREYYI

B0JFE0 Replication enhancer1.6e-1849.02Show/hide
Query:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV
        S  EWR YL + KSP+FQD      T+    RH+   ++IQ+Q  +  G  Q F + +I+TRL+P T  FLRVF+ QCMKYLD LGV+S  NV+RA +HV
Subjt:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV

Query:  MW
        +W
Subjt:  MW

I2APP8 Replication enhancer protein1.9e-1647.06Show/hide
Query:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV
        S+ EWR YLG+ KS +FQD       +PD  RH+    S+QSQP E  G++QMF +L            FLRVF+ Q  KYL+  GV+S  NVLRAV+HV
Subjt:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHV

Query:  MW
        +W
Subjt:  MW

SwissProt top hitse value%identityAlignment
P14968 Transcriptional activator protein3.7e-0944.44Show/hide
Query:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLR
        S+ EWR YLGN +SPVF +      T+P    H+ +  SIQSQP EG G+SQMF  L+    L      FL+
Subjt:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLR

P14976 Transcriptional activator protein4.9e-0944.44Show/hide
Query:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLR
        S+ EWR YLGN +SPVF +      T+P    H+ +  SIQSQP EG G+SQMF  L     L      FL+
Subjt:  SAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLR

P14977 Replication enhancer protein1.5e-1049.25Show/hide
Query:  GNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMWT-------CKVGH
        G  + F N +I+T L+P TGLFLRVF++Q +KYLD +GV+S  NV+RA DHV++        CK+ H
Subjt:  GNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMWT-------CKVGH

P27265 Replication enhancer protein2.9e-0953.7Show/hide
Query:  GNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMW
        G  + F +  I+T L+P TG FLRVF+++ +KYLD LGV+S  NV+RAVDHV++
Subjt:  GNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMW

P36281 Replication enhancer protein2.2e-0961.22Show/hide
Query:  FHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMW
        F +  +FTRL+P T  FLRVFK Q MKYLD LGV+S  NV+R+VDHV++
Subjt:  FHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMW

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCTGGAGAATGGCGTTTTTATCTGGGAAACCCCAAATCCCCTGTATTTCAAGATGGTGTCACACACGACGCGACCGTTCCAGACACAACACGACATAATCGAAC
TGGAGATTCGATTCAATCACAACCTTCGGAGGGCTTTGGCAATTCACAAATGTTTCATAACCTTGAGATCTTCACTCGCTTACGACCTCCGACAGGGCTTTTCTTGCGAG
TCTTTAAATTTCAATGTATGAAATATTTAGACATGTTAGGGGTTGTTTCTTTTTTTAATGTATTACGTGCTGTAGATCATGTTATGTGGACGTGTAAAGTCGGACATACA
CAGCAAGGTCCCCGTGAGTACTACATCATGTCGGGCTTCATAAGACTGGACCGTGAACGGTCCCTTGCATCATCTGGGAACTTCCGCGGTTCGACATTCCCGGTATACAA
TAGGTTTACAGTAGGACTGGGTTCGCTTCCACAGCTATCCGCCCGTGTCTTGGGCAGTGGGGACAGACACAGACAGGAACAGTTGGACGTTGAAGATCTACATCCGTCGC
ACCATCCCGGCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCTGGAGAATGGCGTTTTTATCTGGGAAACCCCAAATCCCCTGTATTTCAAGATGGTGTCACACACGACGCGACCGTTCCAGACACAACACGACATAATCGAAC
TGGAGATTCGATTCAATCACAACCTTCGGAGGGCTTTGGCAATTCACAAATGTTTCATAACCTTGAGATCTTCACTCGCTTACGACCTCCGACAGGGCTTTTCTTGCGAG
TCTTTAAATTTCAATGTATGAAATATTTAGACATGTTAGGGGTTGTTTCTTTTTTTAATGTATTACGTGCTGTAGATCATGTTATGTGGACGTGTAAAGTCGGACATACA
CAGCAAGGTCCCCGTGAGTACTACATCATGTCGGGCTTCATAAGACTGGACCGTGAACGGTCCCTTGCATCATCTGGGAACTTCCGCGGTTCGACATTCCCGGTATACAA
TAGGTTTACAGTAGGACTGGGTTCGCTTCCACAGCTATCCGCCCGTGTCTTGGGCAGTGGGGACAGACACAGACAGGAACAGTTGGACGTTGAAGATCTACATCCGTCGC
ACCATCCCGGCGAATGA
Protein sequenceShow/hide protein sequence
MSAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMWTCKVGHT
QQGPREYYIMSGFIRLDRERSLASSGNFRGSTFPVYNRFTVGLGSLPQLSARVLGSGDRHRQEQLDVEDLHPSHHPGE