; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021784 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021784
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr7:12025476..12026142
RNA-Seq ExpressionLag0021784
SyntenyLag0021784
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]1.6e-1955.56Show/hide
Query:  WMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG
        W D + +++AIR   FSFTLTGS + WFQ+LKR+SI+SFKELARAF++ F G   + +    LLT+KQ++ ESL+DY+ RFN+E L VEG
Subjt:  WMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.6e-1954.35Show/hide
Query:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG
        R WMD + VS+A++   FS TL+GSA+ WF++LKR SI+SFK LA+AF++ F+G R + +    LLT+KQ++ ESL DY+ RFNEE L VEG
Subjt:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.7e-2157.61Show/hide
Query:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG
        R W D +D+ +AIR   FSFTLTGSA+ WF++LKR SI+SFKELA AF++ F+G R + K    LLT+KQ++ ESL++Y+ RFNEE L VEG
Subjt:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.3e-2057.61Show/hide
Query:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG
        R WMD + VS+A+R   FS TL GSA+ WF++LKR SI+SFK LARAF++ F+G R + +    LLT+KQ++ ESLRDY+ RFNEE L VEG
Subjt:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]4.3e-2057.61Show/hide
Query:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG
        R WMD + VSDAIR   FS TL GSA+ WF++LKR SI+SFK LARAF++ F+G R + +    LLT+KQ++ ESL DY+ RFNEE L +EG
Subjt:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166197.9e-2055.56Show/hide
Query:  WMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG
        W D + +++AIR   FSFTLTGS + WFQ+LKR+SI+SFKELARAF++ F G   + +    LLT+KQ++ ESL+DY+ RFN+E L VEG
Subjt:  WMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG

A0A6J1D7D2 uncharacterized protein LOC1110183077.9e-2054.35Show/hide
Query:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG
        R WMD + VS+A++   FS TL+GSA+ WF++LKR SI+SFK LA+AF++ F+G R + +    LLT+KQ++ ESL DY+ RFNEE L VEG
Subjt:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG

A0A6J1DWY0 uncharacterized protein LOC1110252932.1e-2057.61Show/hide
Query:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG
        R WMD + VS+A+R   FS TL GSA+ WF++LKR SI+SFK LARAF++ F+G R + +    LLT+KQ++ ESLRDY+ RFNEE L VEG
Subjt:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG

A0A6J1DZ49 uncharacterized protein LOC1110248518.4e-2257.61Show/hide
Query:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG
        R W D +D+ +AIR   FSFTLTGSA+ WF++LKR SI+SFKELA AF++ F+G R + K    LLT+KQ++ ESL++Y+ RFNEE L VEG
Subjt:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG

A0A6J1E1E7 uncharacterized protein LOC1110255482.1e-2057.61Show/hide
Query:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG
        R WMD + VSDAIR   FS TL GSA+ WF++LKR SI+SFK LARAF++ F+G R + +    LLT+KQ++ ESL DY+ RFNEE L +EG
Subjt:  RNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFNEETLHVEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAAAGCTGTCGAGGTCGAGGCCAAGGCTGCCGAGACTGAGGCTAGGGCAGCCGAGGCGAGGCTAAAGTGGTCGAGGAACTGGATGGACTTCCACGACGTTTCAGA
TGCAATCAGGTATCACACTTTCTCTTTCACTCTGACAGGATCAGCCAAGCAATGGTTTCAGAGGTTGAAAAGGAGATCCATCAACTCTTTCAAAGAATTAGCCCGAGCAT
TCCTTTCACACTTCATGGGAGCTAGAGAGCAACGCAAGTCTTACATCAACCTCCTAACTGTCAAACAACAGTCAGGTGAGAGTTTGCGTGATTATATAACGCGTTTTAAT
GAAGAAACACTACATGTTGAGGGTACAGTGAGGGAGCAGCCTGGTAGCCATAACCACCGGACTAGAAGACGAGAGACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCAAAGCTGTCGAGGTCGAGGCCAAGGCTGCCGAGACTGAGGCTAGGGCAGCCGAGGCGAGGCTAAAGTGGTCGAGGAACTGGATGGACTTCCACGACGTTTCAGA
TGCAATCAGGTATCACACTTTCTCTTTCACTCTGACAGGATCAGCCAAGCAATGGTTTCAGAGGTTGAAAAGGAGATCCATCAACTCTTTCAAAGAATTAGCCCGAGCAT
TCCTTTCACACTTCATGGGAGCTAGAGAGCAACGCAAGTCTTACATCAACCTCCTAACTGTCAAACAACAGTCAGGTGAGAGTTTGCGTGATTATATAACGCGTTTTAAT
GAAGAAACACTACATGTTGAGGGTACAGTGAGGGAGCAGCCTGGTAGCCATAACCACCGGACTAGAAGACGAGAGACTTCTTAA
Protein sequenceShow/hide protein sequence
MTKAVEVEAKAAETEARAAEARLKWSRNWMDFHDVSDAIRYHTFSFTLTGSAKQWFQRLKRRSINSFKELARAFLSHFMGAREQRKSYINLLTVKQQSGESLRDYITRFN
EETLHVEGTVREQPGSHNHRTRRRETS