; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021818 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021818
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:12581057..12581961
RNA-Seq ExpressionLag0021818
SyntenyLag0021818
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48912.1 hypothetical protein EZV62_024787 [Acer yangbiense]3.2e-1530.27Show/hide
Query:  DLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSAL---------NVPINCMTVEMVRVLRESVGVLEEVDWDREN
        ++ +  +K  L  +   V E+ D        E++LCLV KV+  KKVN +AFK+++             +VPI CM     + + E +  + ++ ++ + 
Subjt:  DLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSAL---------NVPINCMTVEMVRVLRESVGVLEEVDWDREN

Query:  GWTGPVMRMRVVVGISKPLQRVVKVKA-KDGRMVWCPIQYKKLPEFCFNCGIIDRSHREC--QQASNGGLGSDEFHYGDWLKASL
         W G  ++++V + ISKPL+R +++K  K   +V   ++Y++LPEFC+ CG I  + ++C   +A +  L SD   YG W++AS+
Subjt:  GWTGPVMRMRVVVGISKPLQRVVKVKA-KDGRMVWCPIQYKKLPEFCFNCGIIDRSHREC--QQASNGGLGSDEFHYGDWLKASL

TXG54199.1 hypothetical protein EZV62_019455 [Acer yangbiense]1.1e-1528.02Show/hide
Query:  DLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSALN-------------------------------------VP
        +L +  +   L E+   + E  +   +   +++D CLV KV+  KKVN EAFK ++    N                                     +P
Subjt:  DLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSALN-------------------------------------VP

Query:  INCMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVK-AKDGRMVWCPIQYKKLPEFCFNCGIIDRSHREC--QQASNGGLGS
        I CM   + + L E +G + E+  +    W G  +R++V + ISKPL+R +++K  KD  +    ++Y+++PEFCF CG +    +EC  ++A    L  
Subjt:  INCMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVK-AKDGRMVWCPIQYKKLPEFCFNCGIIDRSHREC--QQASNGGLGS

Query:  DEFHYGDWLKASLWKKPVGLGGGNGGAGNEVR
            YG WLKA +  KP   GG  G A +  R
Subjt:  DEFHYGDWLKASLWKKPVGLGGGNGGAGNEVR

TXG60399.1 hypothetical protein EZV62_014972 [Acer yangbiense]1.4e-1527.92Show/hide
Query:  KQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRS------------------------------ALNVPINCMTVEMVRVLRESVGVLE
        K +++  V++     + +++DLCLV K++  K VN E F++V+                                 +N P+ CMT EM       VG L 
Subjt:  KQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRS------------------------------ALNVPINCMTVEMVRVLRESVGVLE

Query:  EVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQYKKLPEFCFNCGIIDRSHRECQQASNGGLGSDEFHYGDWLKAS----LWKKPVG
        ++D    +   G  MR++V + ISKPL+R ++++ K G      I+Y+KLPE+CF+ G+I  S++ CQ   +G +   +F YG WL+A+      + P  
Subjt:  EVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQYKKLPEFCFNCGIIDRSHRECQQASNGGLGSDEFHYGDWLKAS----LWKKPVG

Query:  LGGGNGGAGNEV--RVVNSKEVGGGRRAVGGEREREQDKE
             GG+   V  R +N+++     + +GG + R   K+
Subjt:  LGGGNGGAGNEV--RVVNSKEVGGGRRAVGGEREREQDKE

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]6.8e-2626.71Show/hide
Query:  MEDLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSAL--------------------------------------
        M+++ +  + +  T  ++  + ++  + + + + + LC+V K+  +K++++EA +SVM+S                                        
Subjt:  MEDLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSAL--------------------------------------

Query:  ------------------------------NVPINCMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQY
                                      N+P  C++ EM  +L   +G +EE++ D  +GW GP +R+RV + +SKPL+R +K+K  DG+ +WCP++Y
Subjt:  ------------------------------NVPINCMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQY

Query:  KKLPEFCFNCGIIDRSHRECQQASNGGLGSDEFHYGDWLKASLWKKPVG-------LGGGNGGAGNEVRVVNSKEVGGGRRAVGGEREREQD
        +KLP+FC+ CG I  S REC+Q S     +    YGDWL+A+L KK V          GG  G G+        +V GGR   G  R R+++
Subjt:  KKLPEFCFNCGIIDRSHRECQQASNGGLGSDEFHYGDWLKASLWKKPVG-------LGGGNGGAGNEVRVVNSKEVGGGRRAVGGEREREQD

XP_042969013.1 uncharacterized protein LOC122301685 [Carya illinoinensis]8.3e-1641.48Show/hide
Query:  NVPINCMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQYKKLPEFCFNCGIIDRSHRECQQAS--NGGL
        N+P+  MT  + R + E VG + EVD D+E    GP +R+ + V I+KPL R V V + +G  VW P +Y++LP FCF+CGII      C++ +      
Subjt:  NVPINCMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQYKKLPEFCFNCGIIDRSHRECQQAS--NGGL

Query:  GSDEFHYGDWLKASLWKKPVG--LGGGNGGAGNEV
        G++EF YG WL+AS  K P     GG  G  GN V
Subjt:  GSDEFHYGDWLKASLWKKPVG--LGGGNGGAGNEV

TrEMBL top hitse value%identityAlignment
A0A5C7GX56 CCHC-type domain-containing protein1.5e-1530.27Show/hide
Query:  DLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSAL---------NVPINCMTVEMVRVLRESVGVLEEVDWDREN
        ++ +  +K  L  +   V E+ D        E++LCLV KV+  KKVN +AFK+++             +VPI CM     + + E +  + ++ ++ + 
Subjt:  DLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSAL---------NVPINCMTVEMVRVLRESVGVLEEVDWDREN

Query:  GWTGPVMRMRVVVGISKPLQRVVKVKA-KDGRMVWCPIQYKKLPEFCFNCGIIDRSHREC--QQASNGGLGSDEFHYGDWLKASL
         W G  ++++V + ISKPL+R +++K  K   +V   ++Y++LPEFC+ CG I  + ++C   +A +  L SD   YG W++AS+
Subjt:  GWTGPVMRMRVVVGISKPLQRVVKVKA-KDGRMVWCPIQYKKLPEFCFNCGIIDRSHREC--QQASNGGLGSDEFHYGDWLKASL

A0A5C7HBH6 CCHC-type domain-containing protein5.3e-1628.02Show/hide
Query:  DLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSALN-------------------------------------VP
        +L +  +   L E+   + E  +   +   +++D CLV KV+  KKVN EAFK ++    N                                     +P
Subjt:  DLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSALN-------------------------------------VP

Query:  INCMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVK-AKDGRMVWCPIQYKKLPEFCFNCGIIDRSHREC--QQASNGGLGS
        I CM   + + L E +G + E+  +    W G  +R++V + ISKPL+R +++K  KD  +    ++Y+++PEFCF CG +    +EC  ++A    L  
Subjt:  INCMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVK-AKDGRMVWCPIQYKKLPEFCFNCGIIDRSHREC--QQASNGGLGS

Query:  DEFHYGDWLKASLWKKPVGLGGGNGGAGNEVR
            YG WLKA +  KP   GG  G A +  R
Subjt:  DEFHYGDWLKASLWKKPVGLGGGNGGAGNEVR

A0A5C7HUE0 Uncharacterized protein6.9e-1627.92Show/hide
Query:  KQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRS------------------------------ALNVPINCMTVEMVRVLRESVGVLE
        K +++  V++     + +++DLCLV K++  K VN E F++V+                                 +N P+ CMT EM       VG L 
Subjt:  KQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRS------------------------------ALNVPINCMTVEMVRVLRESVGVLE

Query:  EVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQYKKLPEFCFNCGIIDRSHRECQQASNGGLGSDEFHYGDWLKAS----LWKKPVG
        ++D    +   G  MR++V + ISKPL+R ++++ K G      I+Y+KLPE+CF+ G+I  S++ CQ   +G +   +F YG WL+A+      + P  
Subjt:  EVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQYKKLPEFCFNCGIIDRSHRECQQASNGGLGSDEFHYGDWLKAS----LWKKPVG

Query:  LGGGNGGAGNEV--RVVNSKEVGGGRRAVGGEREREQDKE
             GG+   V  R +N+++     + +GG + R   K+
Subjt:  LGGGNGGAGNEV--RVVNSKEVGGGRRAVGGEREREQDKE

A0A6J1D765 uncharacterized protein LOC1110179023.3e-2626.71Show/hide
Query:  MEDLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSAL--------------------------------------
        M+++ +  + +  T  ++  + ++  + + + + + LC+V K+  +K++++EA +SVM+S                                        
Subjt:  MEDLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSAL--------------------------------------

Query:  ------------------------------NVPINCMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQY
                                      N+P  C++ EM  +L   +G +EE++ D  +GW GP +R+RV + +SKPL+R +K+K  DG+ +WCP++Y
Subjt:  ------------------------------NVPINCMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQY

Query:  KKLPEFCFNCGIIDRSHRECQQASNGGLGSDEFHYGDWLKASLWKKPVG-------LGGGNGGAGNEVRVVNSKEVGGGRRAVGGEREREQD
        +KLP+FC+ CG I  S REC+Q S     +    YGDWL+A+L KK V          GG  G G+        +V GGR   G  R R+++
Subjt:  KKLPEFCFNCGIIDRSHRECQQASNGGLGSDEFHYGDWLKASLWKKPVG-------LGGGNGGAGNEVRVVNSKEVGGGRRAVGGEREREQD

A0A6J1DVS4 uncharacterized protein LOC1110235552.6e-1524.77Show/hide
Query:  MEDLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMR-----------------------------------------
        M+D+ +  + + L ++++  I +++ + + + + I LC V K+  +K++  EAF SVM+                                         
Subjt:  MEDLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMR-----------------------------------------

Query:  ---------SALNVPIN------------------CMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQY
                 +A N P++                  CMT +M + L   +G +EEVD      W  P + +RV + + KPL+R +KVK  DG+ +WCP++Y
Subjt:  ---------SALNVPIN------------------CMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISKPLQRVVKVKAKDGRMVWCPIQY

Query:  KKLPEFCFNCGIIDRSHRECQQ
        ++LP+FC+ CG +  S RE ++
Subjt:  KKLPEFCFNCGIIDRSHRECQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACTTGGTAGAATGCTTAAAAAAATGGGTGTTGACTGAGAAGCAAGACAGGGTGATTGAAGTTGAGGACAATAGGCTATTATTTTCGACAGAAGAGATCGATCT
ATGCTTGGTTACAAAGGTGATCATAAACAAGAAGGTCAATAGTGAGGCCTTTAAATCAGTCATGAGATCGGCGCTTAATGTTCCGATTAATTGTATGACGGTAGAAATGG
TCAGGGTCCTAAGGGAGTCGGTAGGGGTGCTGGAGGAGGTTGACTGGGACAGGGAGAATGGTTGGACGGGACCGGTGATGAGAATGAGGGTAGTAGTAGGCATCTCTAAA
CCATTGCAGAGGGTGGTGAAAGTAAAAGCAAAAGATGGGAGAATGGTATGGTGCCCAATCCAATACAAGAAGCTTCCTGAATTTTGTTTCAATTGTGGAATAATAGACCG
CTCGCATAGAGAGTGCCAGCAGGCATCAAATGGGGGGCTGGGCTCGGACGAATTCCATTATGGGGATTGGTTGAAGGCCTCATTGTGGAAAAAGCCTGTAGGACTAGGAG
GGGGTAATGGTGGAGCGGGGAATGAAGTGCGGGTTGTAAACTCAAAGGAGGTGGGAGGGGGAAGGAGGGCTGTCGGAGGAGAAAGAGAGAGGGAGCAAGACAAAGAATGG
GTGAATACTCGAGAAGGGTTAAGTGGCCAGGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACTTGGTAGAATGCTTAAAAAAATGGGTGTTGACTGAGAAGCAAGACAGGGTGATTGAAGTTGAGGACAATAGGCTATTATTTTCGACAGAAGAGATCGATCT
ATGCTTGGTTACAAAGGTGATCATAAACAAGAAGGTCAATAGTGAGGCCTTTAAATCAGTCATGAGATCGGCGCTTAATGTTCCGATTAATTGTATGACGGTAGAAATGG
TCAGGGTCCTAAGGGAGTCGGTAGGGGTGCTGGAGGAGGTTGACTGGGACAGGGAGAATGGTTGGACGGGACCGGTGATGAGAATGAGGGTAGTAGTAGGCATCTCTAAA
CCATTGCAGAGGGTGGTGAAAGTAAAAGCAAAAGATGGGAGAATGGTATGGTGCCCAATCCAATACAAGAAGCTTCCTGAATTTTGTTTCAATTGTGGAATAATAGACCG
CTCGCATAGAGAGTGCCAGCAGGCATCAAATGGGGGGCTGGGCTCGGACGAATTCCATTATGGGGATTGGTTGAAGGCCTCATTGTGGAAAAAGCCTGTAGGACTAGGAG
GGGGTAATGGTGGAGCGGGGAATGAAGTGCGGGTTGTAAACTCAAAGGAGGTGGGAGGGGGAAGGAGGGCTGTCGGAGGAGAAAGAGAGAGGGAGCAAGACAAAGAATGG
GTGAATACTCGAGAAGGGTTAAGTGGCCAGGAAAATTGA
Protein sequenceShow/hide protein sequence
MEDLVECLKKWVLTEKQDRVIEVEDNRLLFSTEEIDLCLVTKVIINKKVNSEAFKSVMRSALNVPINCMTVEMVRVLRESVGVLEEVDWDRENGWTGPVMRMRVVVGISK
PLQRVVKVKAKDGRMVWCPIQYKKLPEFCFNCGIIDRSHRECQQASNGGLGSDEFHYGDWLKASLWKKPVGLGGGNGGAGNEVRVVNSKEVGGGRRAVGGEREREQDKEW
VNTREGLSGQEN