CuGenDBv2

Gene ID	Lag0021839
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	CCHC-type domain-containing protein
Genome location	chr7:12865364..12866115
RNA-Seq Expression	Lag0021839
Synteny	Lag0021839
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]

5.8e-28

40.43

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Query:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE
        +W+ L K  SS S++NVVNLKS+LQ + KK                            EDL+IY ++ L  EYNTF+TS+RTRS  VTFEELHV   +EE
Subjt:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE

Query:  SALEKQIK-----------------------------RRGRGFGRPPFCNPGRGRIP------GHPVGNTLKPQTNKYSSRMQCQIFQRAGHSAIDCYNR
        SAL KQ K                              RG G G+    N G GR        GH +    KP  + +++   CQI  R GH+A+DC+NR
Subjt:  SALEKQIK-----------------------------RRGRGFGRPPFCNPGRGRIP------GHPVGNTLKPQTNKYSSRMQCQIFQRAGHSAIDCYNR

Query:  MNYNFQGRHPPAQLAAMVATQNYNVMANTSVSQLS
        MNYNFQGRHPP QLAAMVA+QN   ++  + S L+
Subjt:  MNYNFQGRHPPAQLAAMVATQNYNVMANTSVSQLS

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]

4.9e-27

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Query:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE
        +W+ L K  SS S++NVVNLKS+LQ + KK                            EDL+IY ++ L  EYNTF+TS+RTRS  VTFEELHV   +EE
Subjt:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE

Query:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF
        SAL KQ K                              RG G G+      GR        G+   P Q + + +   CQI  R GH+A+DC+NRMNYNF
Subjt:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF

Query:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS
        QGRHPP QLAAMVA+QN   ++  + S L+
Subjt:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]

4.9e-27

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Query:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE
        +W+ L K  SS S++NVVNLKS+LQ + KK                            EDL+IY ++ L  EYNTF+TS+RTRS  VTFEELHV   +EE
Subjt:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE

Query:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF
        SAL KQ K                              RG G G+      GR        G+   P Q + + +   CQI  R GH+A+DC+NRMNYNF
Subjt:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF

Query:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS
        QGRHPP QLAAMVA+QN   ++  + S L+
Subjt:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS

XP_011658579.1 uncharacterized protein LOC105436058 [Cucumis sativus]

5.8e-28

40.43

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Query:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE
        +W+ L K  SS S++NVVNLKS+LQ + KK                            EDL+IY ++ L  EYNTF+TS+RTRS  VTFEELHV   +EE
Subjt:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE

Query:  SALEKQIK-----------------------------RRGRGFGRPPFCNPGRGRIP------GHPVGNTLKPQTNKYSSRMQCQIFQRAGHSAIDCYNR
        SAL KQ K                              RG G G+    N G GR        GH +    KP  + +++   CQI  R GH+A+DC+NR
Subjt:  SALEKQIK-----------------------------RRGRGFGRPPFCNPGRGRIP------GHPVGNTLKPQTNKYSSRMQCQIFQRAGHSAIDCYNR

Query:  MNYNFQGRHPPAQLAAMVATQNYNVMANTSVSQLS
        MNYNFQGRHPP QLAAMVA+QN   ++  + S L+
Subjt:  MNYNFQGRHPPAQLAAMVATQNYNVMANTSVSQLS

XP_022150845.1 uncharacterized protein LOC111018892 [Momordica charantia]

2.3e-32

41.39

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Query:  MWETLEKHCSSTSQTNVVNLKSELQAVVKKSED---------------------------LVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE
        +WE LEKH SS S+TNVVNLKS+LQ++VKK+E+                           L+IY ++ L  EYNT  TS+RTR+ SV+FEELHV   SEE
Subjt:  MWETLEKHCSSTSQTNVVNLKSELQAVVKKSED---------------------------LVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE

Query:  SALEKQIKR---------------------------------RGRGFGR------PPFCNPGRGRIPGHPVGNTLKPQTNKYSSRMQCQIFQRAGHSAID
        SA+EKQ+KR                                 RG+  GR      P F N GRGR  G+         + +  +R  CQI  + GH+A+D
Subjt:  SALEKQIKR---------------------------------RGRGFGR------PPFCNPGRGRIPGHPVGNTLKPQTNKYSSRMQCQIFQRAGHSAID

Query:  CYNRMNYNFQGRHPPAQLAAMVATQNYNVMANTSVSQLSPWFAD
        CYNRMN++FQGRHPP QLAAMVA QN + +A    S  + W AD
Subjt:  CYNRMNYNFQGRHPPAQLAAMVATQNYNVMANTSVSQLSPWFAD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BI58 uncharacterized protein LOC103490319 isoform X2

2.4e-27

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Query:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE
        +W+ L K  SS S++NVVNLKS+LQ + KK                            EDL+IY ++ L  EYNTF+TS+RTRS  VTFEELHV   +EE
Subjt:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE

Query:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF
        SAL KQ K                              RG G G+      GR        G+   P Q + + +   CQI  R GH+A+DC+NRMNYNF
Subjt:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF

Query:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS
        QGRHPP QLAAMVA+QN   ++  + S L+
Subjt:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X3

2.4e-27

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Query:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE
        +W+ L K  SS S++NVVNLKS+LQ + KK                            EDL+IY ++ L  EYNTF+TS+RTRS  VTFEELHV   +EE
Subjt:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE

Query:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF
        SAL KQ K                              RG G G+      GR        G+   P Q + + +   CQI  R GH+A+DC+NRMNYNF
Subjt:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF

Query:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS
        QGRHPP QLAAMVA+QN   ++  + S L+
Subjt:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X1

2.4e-27

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Query:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE
        +W+ L K  SS S++NVVNLKS+LQ + KK                            EDL+IY ++ L  EYNTF+TS+RTRS  VTFEELHV   +EE
Subjt:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE

Query:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF
        SAL KQ K                              RG G G+      GR        G+   P Q + + +   CQI  R GH+A+DC+NRMNYNF
Subjt:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF

Query:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS
        QGRHPP QLAAMVA+QN   ++  + S L+
Subjt:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS

A0A5D3CLI6 T4.5

2.4e-27

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Query:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE
        +W+ L K  SS S++NVVNLKS+LQ + KK                            EDL+IY ++ L  EYNTF+TS+RTRS  VTFEELHV   +EE
Subjt:  MWETLEKHCSSTSQTNVVNLKSELQAVVKK---------------------------SEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE

Query:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF
        SAL KQ K                              RG G G+      GR        G+   P Q + + +   CQI  R GH+A+DC+NRMNYNF
Subjt:  SALEKQIKR-----------------------------RGRGFGRPPFCNPGRGRIPGHPVGNTLKP-QTNKYSSRMQCQIFQRAGHSAIDCYNRMNYNF

Query:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS
        QGRHPP QLAAMVA+QN   ++  + S L+
Subjt:  QGRHPPAQLAAMVATQNYNVMANTSVSQLS

A0A6J1D9L6 uncharacterized protein LOC111018892

1.1e-32

41.39

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Query:  MWETLEKHCSSTSQTNVVNLKSELQAVVKKSED---------------------------LVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE
        +WE LEKH SS S+TNVVNLKS+LQ++VKK+E+                           L+IY ++ L  EYNT  TS+RTR+ SV+FEELHV   SEE
Subjt:  MWETLEKHCSSTSQTNVVNLKSELQAVVKKSED---------------------------LVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHV---SEE

Query:  SALEKQIKR---------------------------------RGRGFGR------PPFCNPGRGRIPGHPVGNTLKPQTNKYSSRMQCQIFQRAGHSAID
        SA+EKQ+KR                                 RG+  GR      P F N GRGR  G+         + +  +R  CQI  + GH+A+D
Subjt:  SALEKQIKR---------------------------------RGRGFGR------PPFCNPGRGRIPGHPVGNTLKPQTNKYSSRMQCQIFQRAGHSAID

Query:  CYNRMNYNFQGRHPPAQLAAMVATQNYNVMANTSVSQLSPWFAD
        CYNRMN++FQGRHPP QLAAMVA QN + +A    S  + W AD
Subjt:  CYNRMNYNFQGRHPPAQLAAMVATQNYNVMANTSVSQLSPWFAD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTGGGAGACTCTAGAGAAACACTGCTCTTCTACTTCGCAAACGAATGTCGTTAACCTAAAATCAGAGTTGCAAGCTGTTGTGAAGAAATCTGAGGATCTGGTGATCTA
CACGATGAGTGACTTACTTGCTGAATACAACACTTTCAAGACGTCTCTGCGTACTCGATCTCATTCGGTCACCTTCGAAGAACTTCATGTTTCTGAAGAATCTGCCCTTG
AGAAGCAGATTAAACGTCGTGGAAGAGGTTTTGGACGTCCTCCTTTTTGTAACCCTGGTCGTGGACGTATACCTGGACATCCTGTTGGTAATACTTTGAAACCTCAAACT
AATAAGTATTCTTCTCGTATGCAATGCCAGATTTTTCAGCGAGCAGGTCACAGTGCGATTGATTGTTATAATCGCATGAATTACAATTTTCAAGGTCGTCATCCACCTGC
TCAGTTAGCCGCTATGGTTGCTACTCAAAATTATAATGTTATGGCCAACACTTCTGTTTCTCAGCTATCTCCTTGGTTTGCTGATCTGGTTGCAACTCTCATGTTACCTC
TGATATGA

mRNA sequence

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Protein sequence

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MWETLEKHCSSTSQTNVVNLKSELQAVVKKSEDLVIYTMSDLLAEYNTFKTSLRTRSHSVTFEELHVSEESALEKQIKRRGRGFGRPPFCNPGRGRIPGHPVGNTLKPQT
NKYSSRMQCQIFQRAGHSAIDCYNRMNYNFQGRHPPAQLAAMVATQNYNVMANTSVSQLSPWFADLVATLMLPLI

Lag0021839 (gene) of Sponge gourd (AG-4) v1 genome