CuGenDBv2

Gene ID	Lag0021844
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Transmembrane protein
Genome location	chr7:12949946..12951853
RNA-Seq Expression	Lag0021844
Synteny	Lag0021844
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004152133.2 uncharacterized protein LOC101218967 isoform X3 [Cucumis sativus]

2.5e-49

87.22

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Query:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVA-ASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
        MM + QRD G+SSVF ELSSLVMNILRSPP SIPF DHSPVV+ ASSSRR+IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGL+MFFYVA
Subjt:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVA-ASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA

Query:  AVVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM
        AVVS LSMIGRSI CYATAP  PRKDIPAWKLM
Subjt:  AVVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM

XP_008454051.1 PREDICTED: uncharacterized protein LOC103494590 isoform X2 [Cucumis melo]

7.7e-51

89.47

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Query:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVA-ASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
        MM +QQRD G+SSVF ELSSLVMNILR+PPSSIPFSDHSPVV+ ASSSRR+IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
Subjt:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVA-ASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA

Query:  AVVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM
        AVVS LSMIGRSI CYATAP  PRKDIPAWKLM
Subjt:  AVVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM

XP_022158962.1 uncharacterized protein LOC111025409 [Momordica charantia]

2.1e-48

82.58

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Query:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSP-VVAASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAA
        M+ +QQRD +SSVF ELS+LVMNI+R PPSS+ FSDHSP VV+ S SRR IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAA
Subjt:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSP-VVAASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAA

Query:  VVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM
        VVSS++MIGRSIFCYATAP  PRKDI AWK+M
Subjt:  VVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM

XP_022979452.1 uncharacterized protein LOC111479165 [Cucurbita maxima]

3.6e-48

86.26

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Query:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVAASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MM +QQ+D QSSVF ELSSLVMNILRSPPS+IP SD S +V+A SSRR IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVAASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSSLSMIGRSIFCYATAPSAPRKDIPAWKLM
        VS LSMIGRSIFCYATAPS  R+DIPAWKLM
Subjt:  VSSLSMIGRSIFCYATAPSAPRKDIPAWKLM

XP_038904470.1 uncharacterized protein LOC120090836 isoform X1 [Benincasa hispida]

2.0e-51

89.39

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Query:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVAASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAA
        MM +QQRD GQSSVF E SSLVMNILRSPPSSIPFSDHSPVV  +SSRRS P QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAA
Subjt:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVAASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAA

Query:  VVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM
        VVS LSMIGRSI CYATAP  PRKDIPAWKLM
Subjt:  VVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KW01 Uncharacterized protein

1.2e-49

87.22

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Query:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVA-ASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
        MM + QRD G+SSVF ELSSLVMNILRSPP SIPF DHSPVV+ ASSSRR+IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGL+MFFYVA
Subjt:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVA-ASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA

Query:  AVVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM
        AVVS LSMIGRSI CYATAP  PRKDIPAWKLM
Subjt:  AVVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM

A0A1S3BX78 uncharacterized protein LOC103494590 isoform X2

3.7e-51

89.47

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Query:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVA-ASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
        MM +QQRD G+SSVF ELSSLVMNILR+PPSSIPFSDHSPVV+ ASSSRR+IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
Subjt:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVA-ASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA

Query:  AVVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM
        AVVS LSMIGRSI CYATAP  PRKDIPAWKLM
Subjt:  AVVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM

A0A5A7TRR9 Uncharacterized protein

8.6e-48

89.06

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Query:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVA-ASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
        MM +QQRD G+SSVF ELSSLVMNILR+PPSSIPFSDHSPVV+ ASSSRR+IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
Subjt:  MMPQQQRD-GQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVA-ASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA

Query:  AVVSSLSMIGRSIFCYATAPSAPRKDIP
        AVVS LSMIGRSI CYATAP  PRKDIP
Subjt:  AVVSSLSMIGRSIFCYATAPSAPRKDIP

A0A6J1DYI7 uncharacterized protein LOC111025409

1.0e-48

82.58

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Query:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSP-VVAASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAA
        M+ +QQRD +SSVF ELS+LVMNI+R PPSS+ FSDHSP VV+ S SRR IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAA
Subjt:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSP-VVAASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAA

Query:  VVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM
        VVSS++MIGRSIFCYATAP  PRKDI AWK+M
Subjt:  VVSSLSMIGRSIFCYATAPSAPRKDIPAWKLM

A0A6J1INR6 uncharacterized protein LOC111479165

1.7e-48

86.26

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Query:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVAASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MM +QQ+D QSSVF ELSSLVMNILRSPPS+IP SD S +V+A SSRR IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVAASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSSLSMIGRSIFCYATAPSAPRKDIPAWKLM
        VS LSMIGRSIFCYATAPS  R+DIPAWKLM
Subjt:  VSSLSMIGRSIFCYATAPSAPRKDIPAWKLM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G27290.1 unknown protein

2.9e-32

55.24

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Query:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVAA-----------SSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVI
        MM +Q+ + QS VF +LSSLV+N+LRSPP  I   DH P   A           SSS  S+   I+P+GFASLLLGIS+ALMLCGSVTFFIGF++MPWV+
Subjt:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVAA-----------SSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVI

Query:  GLVMFFYVAAVVSSLSMIGRSIFCYATAPSAPR-KDIPAWKLM
         L++ FYVA +VS++SM+GRSI CY   P +P  K+I  WKL+
Subjt:  GLVMFFYVAAVVSSLSMIGRSIFCYATAPSAPR-KDIPAWKLM

AT1G27290.2 unknown protein

2.9e-32

55.24

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Query:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVAA-----------SSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVI
        MM +Q+ + QS VF +LSSLV+N+LRSPP  I   DH P   A           SSS  S+   I+P+GFASLLLGIS+ALMLCGSVTFFIGF++MPWV+
Subjt:  MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVAA-----------SSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVI

Query:  GLVMFFYVAAVVSSLSMIGRSIFCYATAPSAPR-KDIPAWKLM
         L++ FYVA +VS++SM+GRSI CY   P +P  K+I  WKL+
Subjt:  GLVMFFYVAAVVSSLSMIGRSIFCYATAPSAPR-KDIPAWKLM

Sequences

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CDS sequence

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ATGATGCCACAGCAGCAGCGAGATGGGCAATCGAGTGTTTTCTGTGAGCTTTCTTCCCTTGTTATGAATATTCTCCGATCGCCTCCGTCGTCGATTCCGTTTTCCGATCA
CTCGCCGGTGGTGGCCGCCTCATCGTCGCGGCGGTCGATTCCGACGCAGATAACTCCGGCGGGGTTTGCGTCGCTTCTTCTAGGGATTTCTCTGGCTCTGATGCTCTGTG
GTTCGGTTACGTTCTTCATCGGATTCATGATGATGCCTTGGGTTATTGGACTGGTTATGTTTTTCTATGTCGCGGCTGTTGTTTCGAGCCTCTCCATGATCGGACGCTCG
ATTTTCTGCTACGCTACGGCTCCGTCTGCGCCCAGAAAGGACATTCCAGCTTGGAAACTAATGTGA

mRNA sequence

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Protein sequence

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MMPQQQRDGQSSVFCELSSLVMNILRSPPSSIPFSDHSPVVAASSSRRSIPTQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSSLSMIGRS
IFCYATAPSAPRKDIPAWKLM

Lag0021844 (gene) of Sponge gourd (AG-4) v1 genome