CuGenDBv2

Gene ID	Lag0021847
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	stress-associated endoplasmic reticulum protein 2-like
Genome location	chr7:12991674..12992520
RNA-Seq Expression	Lag0021847
Synteny	Lag0021847
Gene Ontology terms	GO:0006486 - protein glycosylation (biological process) GO:0006886 - intracellular protein transport (biological process) GO:0030968 - endoplasmic reticulum unfolded protein response (biological process) GO:0005783 - endoplasmic reticulum (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR010580 - Stress-associated endoplasmic reticulum protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAF2292900.1 hypothetical protein GH714_029713 [Hevea brasiliensis]

4.0e-23

83.08

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Query:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLS
        TTSRRLADRKVE+FEKNI KRGAVPET TKKGKDYPVGP+LLGFF+FVVIGSYN D NKW +G++
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLS

KAF2292931.1 hypothetical protein GH714_029922 [Hevea brasiliensis]

4.0e-23

83.08

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Query:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLS
        TTSRRLADRKVE+FEKNI KRGAVPET TKKGKDYPVGP+LLGFF+FVVIGSYN D NKW +G++
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLS

RZB96231.1 hypothetical protein D0Y65_020164, partial [Glycine soja]

1.3e-24

68.48

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Query:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLSHFRAEGLQKAGHEVKTLLCYLLVLSCL
        TTSRRLADRKVE+FEKNI KRG VP+T TKKGKDYPVGP+LLGFFVFVVIGSYNQD NKWR+GL+             +  +LC+LL LS L
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLSHFRAEGLQKAGHEVKTLLCYLLVLSCL

TYK28997.1 KH domain-containing protein [Cucumis melo var. makuwa]

2.5e-25

95.16

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Query:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRN
        TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGP+LLGFFVFVVIGSYNQD N+WRN
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRN

XP_040873531.1 ribosome associated membrane protein RAMP4 isoform X1 [Glycine max]

9.6e-25

67.74

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Query:  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLSHFRAEGLQKAGHEVKTLLCYLLVLSCL
        MTTSRRLADRKVE+FEKNI KRG VP+T TKKGKDYPVGP+LLGFFVFVVIGSYNQD N+WR+GL+             +  +LC+LL LS L
Subjt:  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLSHFRAEGLQKAGHEVKTLLCYLLVLSCL

TrEMBL top hits

e value

%identity

Alignment

A0A445JCR9 Uncharacterized protein (Fragment)

6.1e-25

68.48

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Query:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLSHFRAEGLQKAGHEVKTLLCYLLVLSCL
        TTSRRLADRKVE+FEKNI KRG VP+T TKKGKDYPVGP+LLGFFVFVVIGSYNQD NKWR+GL+             +  +LC+LL LS L
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLSHFRAEGLQKAGHEVKTLLCYLLVLSCL

A0A5D3DYM9 KH domain-containing protein

1.2e-25

95.16

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Query:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRN
        TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGP+LLGFFVFVVIGSYNQD N+WRN
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRN

A0A6A6KV46 Uncharacterized protein

2.0e-23

83.08

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Query:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLS
        TTSRRLADRKVE+FEKNI KRGAVPET TKKGKDYPVGP+LLGFF+FVVIGSYN D NKW +G++
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLS

A0A6A6KVE4 Uncharacterized protein

2.0e-23

83.08

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Query:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLS
        TTSRRLADRKVE+FEKNI KRGAVPET TKKGKDYPVGP+LLGFF+FVVIGSYN D NKW +G++
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLS

I1KS28 Uncharacterized protein

4.6e-25

67.74

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Query:  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLSHFRAEGLQKAGHEVKTLLCYLLVLSCL
        MTTSRRLADRKVE+FEKNI KRG VP+T TKKGKDYPVGP+LLGFFVFVVIGSYNQD N+WR+GL+             +  +LC+LL LS L
Subjt:  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLSHFRAEGLQKAGHEVKTLLCYLLVLSCL

SwissProt top hits

e value

%identity

Alignment

Q3T073 Stress-associated endoplasmic reticulum protein 2

3.3e-04

53.66

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Query:  ERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGS
        E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS
Subjt:  ERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGS

Q6TAW2 Stress-associated endoplasmic reticulum protein 2

3.3e-04

53.66

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Query:  ERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGS
        E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS
Subjt:  ERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGS

Q8N6R1 Stress-associated endoplasmic reticulum protein 2

3.3e-04

53.66

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Query:  ERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGS
        E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS
Subjt:  ERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGS

Arabidopsis top hits

e value

%identity

Alignment

AT1G27330.1 Ribosome associated membrane protein RAMP4

2.4e-21

86.79

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Query:  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGS
        MTTS+RLADRK+E+F+KNILKRG VPET TKKGKDYPVGP+LLGFFVFVVIGS
Subjt:  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGS

AT1G27350.1 Ribosome associated membrane protein RAMP4

2.4e-21

86.79

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Query:  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGS
        MTTS+RLADRK+E+F+KNILKRG VPET TKKGKDYPVGP+LLGFFVFVVIGS
Subjt:  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGS

Sequences

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CDS sequence

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ATGACGACATCGCGGCGTCTTGCGGATCGGAAGGTGGAGAGGTTCGAGAAGAACATTTTGAAGAGAGGGGCTGTGCCCGAGACTGCTACCAAGAAGGGAAAGGACTACCC
CGTCGGCCCTCTTCTTCTTGGATTCTTCGTTTTTGTCGTCATTGGATCATATAATCAGGACGGCAACAAGTGGAGGAATGGCTTGAGCCATTTCAGAGCTGAGGGGTTGC
AGAAAGCAGGACATGAGGTTAAAACTTTGTTGTGTTATCTGTTAGTCCTTTCTTGTCTGTGGTACCCTGTAGGAGGAGAAGTTTGGTAG

mRNA sequence

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Protein sequence

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MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSYNQDGNKWRNGLSHFRAEGLQKAGHEVKTLLCYLLVLSCLWYPVGGEVW

Lag0021847 (gene) of Sponge gourd (AG-4) v1 genome