; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021853 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021853
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr7:13033905..13034998
RNA-Seq ExpressionLag0021853
SyntenyLag0021853
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3453480.1 reverse transcriptase [Gossypium australe]5.0e-3128.12Show/hide
Query:  CWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETK----------------------SHGDKAG----------------------------GDSQ-----
        CWN RGLG+ +AVR LR+ +++H+P+++FL ETK                      + G + G                            G  +     
Subjt:  CWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETK----------------------SHGDKAG----------------------------GDSQ-----

Query:  AFYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNA
         FYG      +K  WNL++RL++  + PW++ GDFNEIM + E++GG     + M+ F + + NCGL+DVGF+G  F W R    + +I+ERLD+   N 
Subjt:  AFYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNA

Query:  KMMDKAKSFRVEHLDYHHSNHRSIILKL---------------SWMVLQPNYQQPKKAIKFEIQEGLRR--------LKMWNK--ERLKGSIKGAISRKE
        K +      R++HL +  S+H  ++L                 +W  ++ +++   + I     E L +        L+ W K  +R KG +K  ++   
Subjt:  KMMDKAKSFRVEHLDYHHSNHRSIILKL---------------SWMVLQPNYQQPKKAIKFEIQEGLRR--------LKMWNK--ERLKGSIKGAISRKE

Query:  EEINRLSNKQDPNQFDRLCQTEMELENLLEEEENYWKIRSRDDWLKGGYKNT
        E +  L   +D     +L  T++ L   +++EE YW+ RSR +WL+ G +NT
Subjt:  EEINRLSNKQDPNQFDRLCQTEMELENLLEEEENYWKIRSRDDWLKGGYKNT

TYH88491.1 hypothetical protein ES332_D01G192500v1 [Gossypium tomentosum]4.2e-3029.48Show/hide
Query:  CWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETKSHGD---------------------KAGG------DSQ---------------------------A
        CWN RG+GN   VR L+  +  ++P++IFL ETK   +                     K+GG      DS                             
Subjt:  CWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETKSHGD---------------------KAGG------DSQ---------------------------A

Query:  FYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAK
        FYG+ + NKR+ SWN++ R+       WIIGGDFN I+ N ++EGG   P  L++DF EI++   +VD+      F W+  +     +KERLD +  +A+
Subjt:  FYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAK

Query:  MMDKAKSFRVEHLDYHHSNHRSIILKLSWMVLQPNYQQPKKAIKFEI-QEGLRRLKMWNKERLKGSIKGAISRKEEEINRLSNKQDP-NQFDRLCQTEME
         ++       + L    S+H +I+L      L+  ++ P+   K+++        K   KE     ++  IS  +  IN++ + Q   ++ ++L    ++
Subjt:  MMDKAKSFRVEHLDYHHSNHRSIILKLSWMVLQPNYQQPKKAIKFEI-QEGLRRLKMWNKERLKGSIKGAISRKEEEINRLSNKQDP-NQFDRLCQTEME

Query:  LENLLEEEENYWKIRSRDDWLKGGYKNTK
        L+NLL++EE YW  RSR  WLK G KNTK
Subjt:  LENLLEEEENYWKIRSRDDWLKGGYKNTK

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]2.5e-3035.25Show/hide
Query:  YGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAKM
        YGHL Q+ R E+W LI RL+   +LPWI+GGDFNEI+ N E+  G P    LM++F + ++ CGL+D GF GD F W      +  I ERLD++  N  +
Subjt:  YGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAKM

Query:  MDKAKSFRVEHLDYHHSNHRSIILKLSWMVL-----------QP--------NYQQPKKAIK---------------FEIQEGLRRLKMWNKERLKGSIK
            ++  + HL++  S+HR I+ +  W+ +           +P        ++Q+ K+ ++                +I   L  L  WN  RL GS++
Subjt:  MDKAKSFRVEHLDYHHSNHRSIILKLSWMVL-----------QP--------NYQQPKKAIK---------------FEIQEGLRRLKMWNKERLKGSIK

Query:  GAISRKEEEINRLSNKQDPNQFDRLCQTEMELENLLEEEENYWK
        GAI RKE EI R+         D L + + +LE LLEEEE YW+
Subjt:  GAISRKEEEINRLSNKQDPNQFDRLCQTEMELENLLEEEENYWK

XP_030498017.1 uncharacterized protein LOC115713672 [Cannabis sativa]9.7e-3531.79Show/hide
Query:  SYSCWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETKSHG---------------------DKAGG---------------DSQAFYGHLNQNKRKESWN
        S  CWN RGLGN  A+ +LR  +RK  P+++FLSETK +G                      K+GG                   FYG+   +   +SW 
Subjt:  SYSCWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETKSHG---------------------DKAGG---------------DSQAFYGHLNQNKRKESWN

Query:  LIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAKMMDKAKSFRVEHLDY
        L+ RL    +LPWI GGDFNEI+   ER+GG       + +F + ++NC LVD+GF G  F WL  +     ++ERLD+YF N +      S +V + D+
Subjt:  LIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAKMMDKAKSFRVEHLDY

Query:  HHSNHRSIILKLSWMVLQPNYQQPKKAIKFEI-------------------------QEGL--------RRLKMWNKERLKGSIKGAISRKEEEI-NRLS
         HS+HR I+  L   +++ +    K++ +FE                          Q+ +         RL  WNK +  GSI   +   ++++ + LS
Subjt:  HHSNHRSIILKLSWMVLQPNYQQPKKAIKFEI-------------------------QEGL--------RRLKMWNKERLKGSIKGAISRKEEEI-NRLS

Query:  NKQDPNQFDRLCQTEMELENLLEEEENYWKIRSRDDWLKGGYKNTK
              + D + + E++L +LL  EE YWK+RSR DWL  G +NTK
Subjt:  NKQDPNQFDRLCQTEMELENLLEEEENYWKIRSRDDWLKGGYKNTK

XP_030922765.1 uncharacterized protein LOC115949628 [Quercus lobata]1.7e-3129.13Show/hide
Query:  CWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSET---------------------KSHGDKAGGDS---------------------------------QA
        CWN RGLGN Q  + L   IR  +P ++FL+ET                      S  ++ GG +                                   
Subjt:  CWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSET---------------------KSHGDKAGGDS---------------------------------QA

Query:  FYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAK
        FYG  + N R ESW+ + RL  + ++PW+  GDFNEI    E+ GG P P K M+ F E+++ CG  D+GF G K+ W R     N+I ERLD+      
Subjt:  FYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAK

Query:  MMDKAKSFRVEHLDYHHSNHRSIIL---------KLSW-----MVLQPNYQQ-------------PKKAIKFEIQEGLRRLKMWNKERLKGSIKGAISRK
         ++   + +V HL+   S+H+ II+         K  W      V  P  ++             P   ++ +IQE  ++L  WN+    G+I  ++  K
Subjt:  MMDKAKSFRVEHLDYHHSNHRSIIL---------KLSW-----MVLQPNYQQ-------------PKKAIKFEIQEGLRRLKMWNKERLKGSIKGAISRK

Query:  EEEINR---LSNKQDPNQFDRLCQTEMELENLLEEEENYWKIRSRDDWLKGGYKNTK
        +E++ +   L+ +  P   DR+C+ + E+  LL +EE  WK RSR  WL+ G +NT+
Subjt:  EEEINR---LSNKQDPNQFDRLCQTEMELENLLEEEENYWKIRSRDDWLKGGYKNTK

TrEMBL top hitse value%identityAlignment
A0A2I4HAC4 uncharacterized protein LOC1090150831.0e-2929.05Show/hide
Query:  WNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETK-------SHGDKAGGDSQ------------------------------------------------A
        WN RGLGN + VR L   ++  NP++IFL ETK          ++ G DS                                                  
Subjt:  WNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETK-------SHGDKAGGDSQ------------------------------------------------A

Query:  FYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAK
        FYG L  + RK SW L+  L   + + W+  GDFNEIM+  E+ G A  P   M+DFCE +N+CGL D+G+ GDKF W   +      KERLD+   NA 
Subjt:  FYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAK

Query:  MMDKAKSFRVEHLDYHHSNHRSIILKLSWMVLQPNYQQPKKAIKFEIQEGLRRLKMWNKERLKGSIKGAISRKEEEINRLSNKQDPNQFDRLCQTEMELE
          +  K++ V     H S+HR I+  +SW        +  +  ++E +  +R          +G  +  ++ K ++++ L +    N  + L + + +++
Subjt:  MMDKAKSFRVEHLDYHHSNHRSIILKLSWMVLQPNYQQPKKAIKFEIQEGLRRLKMWNKERLKGSIKGAISRKEEEINRLSNKQDPNQFDRLCQTEMELE

Query:  NLLEEEENYWKIRSRDDWLKGGYKNTK
         LL+EE+  WK R++  WLK G +N+K
Subjt:  NLLEEEENYWKIRSRDDWLKGGYKNTK

A0A5B6U6G4 Reverse transcriptase2.4e-3128.12Show/hide
Query:  CWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETK----------------------SHGDKAG----------------------------GDSQ-----
        CWN RGLG+ +AVR LR+ +++H+P+++FL ETK                      + G + G                            G  +     
Subjt:  CWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETK----------------------SHGDKAG----------------------------GDSQ-----

Query:  AFYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNA
         FYG      +K  WNL++RL++  + PW++ GDFNEIM + E++GG     + M+ F + + NCGL+DVGF+G  F W R    + +I+ERLD+   N 
Subjt:  AFYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNA

Query:  KMMDKAKSFRVEHLDYHHSNHRSIILKL---------------SWMVLQPNYQQPKKAIKFEIQEGLRR--------LKMWNK--ERLKGSIKGAISRKE
        K +      R++HL +  S+H  ++L                 +W  ++ +++   + I     E L +        L+ W K  +R KG +K  ++   
Subjt:  KMMDKAKSFRVEHLDYHHSNHRSIILKL---------------SWMVLQPNYQQPKKAIKFEIQEGLRR--------LKMWNK--ERLKGSIKGAISRKE

Query:  EEINRLSNKQDPNQFDRLCQTEMELENLLEEEENYWKIRSRDDWLKGGYKNT
        E +  L   +D     +L  T++ L   +++EE YW+ RSR +WL+ G +NT
Subjt:  EEINRLSNKQDPNQFDRLCQTEMELENLLEEEENYWKIRSRDDWLKGGYKNT

A0A5D2MAU2 Uncharacterized protein2.0e-3029.48Show/hide
Query:  CWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETKSHGD---------------------KAGG------DSQ---------------------------A
        CWN RG+GN   VR L+  +  ++P++IFL ETK   +                     K+GG      DS                             
Subjt:  CWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETKSHGD---------------------KAGG------DSQ---------------------------A

Query:  FYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAK
        FYG+ + NKR+ SWN++ R+       WIIGGDFN I+ N ++EGG   P  L++DF EI++   +VD+      F W+  +     +KERLD +  +A+
Subjt:  FYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAK

Query:  MMDKAKSFRVEHLDYHHSNHRSIILKLSWMVLQPNYQQPKKAIKFEI-QEGLRRLKMWNKERLKGSIKGAISRKEEEINRLSNKQDP-NQFDRLCQTEME
         ++       + L    S+H +I+L      L+  ++ P+   K+++        K   KE     ++  IS  +  IN++ + Q   ++ ++L    ++
Subjt:  MMDKAKSFRVEHLDYHHSNHRSIILKLSWMVLQPNYQQPKKAIKFEI-QEGLRRLKMWNKERLKGSIKGAISRKEEEINRLSNKQDP-NQFDRLCQTEME

Query:  LENLLEEEENYWKIRSRDDWLKGGYKNTK
        L+NLL++EE YW  RSR  WLK G KNTK
Subjt:  LENLLEEEENYWKIRSRDDWLKGGYKNTK

A0A6J1DRA0 uncharacterized protein LOC1110224231.2e-3035.25Show/hide
Query:  YGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAKM
        YGHL Q+ R E+W LI RL+   +LPWI+GGDFNEI+ N E+  G P    LM++F + ++ CGL+D GF GD F W      +  I ERLD++  N  +
Subjt:  YGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAKM

Query:  MDKAKSFRVEHLDYHHSNHRSIILKLSWMVL-----------QP--------NYQQPKKAIK---------------FEIQEGLRRLKMWNKERLKGSIK
            ++  + HL++  S+HR I+ +  W+ +           +P        ++Q+ K+ ++                +I   L  L  WN  RL GS++
Subjt:  MDKAKSFRVEHLDYHHSNHRSIILKLSWMVL-----------QP--------NYQQPKKAIK---------------FEIQEGLRRLKMWNKERLKGSIK

Query:  GAISRKEEEINRLSNKQDPNQFDRLCQTEMELENLLEEEENYWK
        GAI RKE EI R+         D L + + +LE LLEEEE YW+
Subjt:  GAISRKEEEINRLSNKQDPNQFDRLCQTEMELENLLEEEENYWK

A0A803NMB3 Uncharacterized protein1.3e-2927.42Show/hide
Query:  WNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETKSHGD--------------------------------------------------KAGGDS----QAF
        WN RGLGN  A R LR  +++ +P+V+FL ETK   +                                                  K G D      AF
Subjt:  WNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETKSHGD--------------------------------------------------KAGGDS----QAF

Query:  YGHLNQNKRKESWNLIDRLNE-QNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAK
        YG  +   ++ SW L+ RL++    LPW+  GDFNEI  N  + GG+    K M+ F +++++C L +  F G+ + W+++++  N++KERLD  F N  
Subjt:  YGHLNQNKRKESWNLIDRLNE-QNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDFCEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAK

Query:  MMDKAKSFRVEHLDYHHSNHRSIILKLS--------------------WMV------------LQPNYQQPKKAIKFEIQEGLRRLKMWNKERLKGSIKG
              +    HLDY+ S+HR+I + ++                    W+              Q  +  P + +   +      L+ W++ +  GS+K 
Subjt:  MMDKAKSFRVEHLDYHHSNHRSIILKLS--------------------WMV------------LQPNYQQPKKAIKFEIQEGLRRLKMWNKERLKGSIKG

Query:  AISRKEEEINRLSNKQDPNQ--FDRLCQTEMELENLLEEEENYWKIRSRDDWLKGGYKNTK
         I+  + ++N L+N    N+   + L + E  L++LLE+EE YW+ RSR DWL  G +NTK
Subjt:  AISRKEEEINRLSNKQDPNQ--FDRLCQTEMELENLLEEEENYWKIRSRDDWLKGGYKNTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAAGGTCTTATTCTTGCTGGAATGTCCGGGGATTGGGGAATACTCAGGCGGTCCGTTCTCTGCGGCATGAGATCCGCAAGCACAATCCCAACGTGATCTTCTT
ATCAGAAACGAAAAGTCATGGAGATAAGGCTGGTGGAGATTCACAGGCTTTTTATGGTCACCTGAATCAAAACAAGCGAAAAGAATCATGGAATCTTATTGATAGGTTGA
ATGAGCAAAACAATCTCCCATGGATTATTGGTGGAGATTTCAACGAAATCATGGTCAACAAAGAAAGAGAAGGAGGGGCTCCAAATCCGACTAAGCTTATGAAGGATTTC
TGTGAAATTATTAACAATTGTGGGCTTGTTGATGTAGGTTTTGCAGGGGATAAATTCATTTGGTTAAGAAGCAAAACAATCCAAAACTCGATAAAAGAAAGGTTGGACCA
GTATTTCTTCAATGCCAAGATGATGGACAAAGCTAAATCGTTCAGAGTGGAGCACCTAGACTATCATCACTCCAACCACAGGTCGATCATCCTTAAGCTCAGTTGGATGG
TCCTGCAGCCCAATTATCAACAGCCAAAAAAAGCTATAAAATTCGAGATTCAAGAAGGGTTGAGAAGGCTAAAAATGTGGAATAAAGAGAGGTTGAAAGGTTCTATCAAG
GGTGCTATATCCAGAAAAGAGGAGGAAATCAATAGACTCTCCAACAAGCAAGACCCGAATCAGTTCGATAGGCTTTGCCAAACAGAAATGGAATTAGAAAATCTGCTCGA
GGAGGAAGAAAATTATTGGAAAATTAGATCCAGAGATGATTGGCTTAAAGGAGGCTACAAAAACACTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATAAGGTCTTATTCTTGCTGGAATGTCCGGGGATTGGGGAATACTCAGGCGGTCCGTTCTCTGCGGCATGAGATCCGCAAGCACAATCCCAACGTGATCTTCTT
ATCAGAAACGAAAAGTCATGGAGATAAGGCTGGTGGAGATTCACAGGCTTTTTATGGTCACCTGAATCAAAACAAGCGAAAAGAATCATGGAATCTTATTGATAGGTTGA
ATGAGCAAAACAATCTCCCATGGATTATTGGTGGAGATTTCAACGAAATCATGGTCAACAAAGAAAGAGAAGGAGGGGCTCCAAATCCGACTAAGCTTATGAAGGATTTC
TGTGAAATTATTAACAATTGTGGGCTTGTTGATGTAGGTTTTGCAGGGGATAAATTCATTTGGTTAAGAAGCAAAACAATCCAAAACTCGATAAAAGAAAGGTTGGACCA
GTATTTCTTCAATGCCAAGATGATGGACAAAGCTAAATCGTTCAGAGTGGAGCACCTAGACTATCATCACTCCAACCACAGGTCGATCATCCTTAAGCTCAGTTGGATGG
TCCTGCAGCCCAATTATCAACAGCCAAAAAAAGCTATAAAATTCGAGATTCAAGAAGGGTTGAGAAGGCTAAAAATGTGGAATAAAGAGAGGTTGAAAGGTTCTATCAAG
GGTGCTATATCCAGAAAAGAGGAGGAAATCAATAGACTCTCCAACAAGCAAGACCCGAATCAGTTCGATAGGCTTTGCCAAACAGAAATGGAATTAGAAAATCTGCTCGA
GGAGGAAGAAAATTATTGGAAAATTAGATCCAGAGATGATTGGCTTAAAGGAGGCTACAAAAACACTAAGTGA
Protein sequenceShow/hide protein sequence
MEIRSYSCWNVRGLGNTQAVRSLRHEIRKHNPNVIFLSETKSHGDKAGGDSQAFYGHLNQNKRKESWNLIDRLNEQNNLPWIIGGDFNEIMVNKEREGGAPNPTKLMKDF
CEIINNCGLVDVGFAGDKFIWLRSKTIQNSIKERLDQYFFNAKMMDKAKSFRVEHLDYHHSNHRSIILKLSWMVLQPNYQQPKKAIKFEIQEGLRRLKMWNKERLKGSIK
GAISRKEEEINRLSNKQDPNQFDRLCQTEMELENLLEEEENYWKIRSRDDWLKGGYKNTK