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Lag0021857 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021857
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-H2 finger protein ATL64
Genome locationchr7:13064855..13065528
RNA-Seq ExpressionLag0021857
SyntenyLag0021857
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010790.1 RING-H2 finger protein ATL18, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2478.57Show/hide
Query:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL
        MCSICLT+FAREDSVC+L  C+HVFHF+CIEKW ERN FTCPLCRCFFNIE  HEK    FVVPDNPS L
Subjt:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL

XP_022140627.1 RING-H2 finger protein ATL64 [Momordica charantia]1.2e-2580Show/hide
Query:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL
        MCSICLT+FAR+DSV EL  C+HVFH NCIEKW+ERN+FTCPLCRCFFNIENR EKL   FV+PDNPSCL
Subjt:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL

XP_022944066.1 RING-H2 finger protein ATL18-like [Cucurbita moschata]1.7e-2478.57Show/hide
Query:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL
        MCSICLT+FAREDSVC+L  C+HVFHF+CIEKW ERN FTCPLCRCFFNIE  HEK    FVVPDNPS L
Subjt:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL

XP_023512248.1 RING-H2 finger protein ATL18-like [Cucurbita pepo subsp. pepo]3.8e-2477.14Show/hide
Query:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL
        MCSICLT+FAREDSVC+L  C+HVFHF+CIEKW ERN FTCPLCRCFFNIE  HE+    FVVPDNPS L
Subjt:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL

XP_038902378.1 probable E3 ubiquitin-protein ligase RHA4A [Benincasa hispida]6.5e-2475.68Show/hide
Query:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRC-FFNIENRHEK---LHFSFVVPDNPSCL
        +CSICL +FAREDSV EL  C HV+HFNCIEKWLERN FTCPLCRC FFNI+NRHEK    +  FVVPDNPSCL
Subjt:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRC-FFNIENRHEK---LHFSFVVPDNPSCL

TrEMBL top hitse value%identityAlignment
A0A5D3BPT9 RING-H2 finger protein ATL18-like4.0e-1961.97Show/hide
Query:  MCSICLTKFAR-EDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL
        +CSICLT+F R EDSVC+L +C H+FHFNCI++W++RN FTCPLCRCFF  +N      + F+VPDNPS L
Subjt:  MCSICLTKFAR-EDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL

A0A6J1CHK3 RING-H2 finger protein ATL645.7e-2680Show/hide
Query:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL
        MCSICLT+FAR+DSV EL  C+HVFH NCIEKW+ERN+FTCPLCRCFFNIENR EKL   FV+PDNPSCL
Subjt:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL

A0A6J1FTE6 RING-H2 finger protein ATL18-like8.3e-2578.57Show/hide
Query:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL
        MCSICLT+FAREDSVC+L  C+HVFHF+CIEKW ERN FTCPLCRCFFNIE  HEK    FVVPDNPS L
Subjt:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCL

A0A6J1G855 E3 ubiquitin-protein ligase ATL41-like9.2e-2476.39Show/hide
Query:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRC--FFNIENRHEKLHFSFVVPDNPSCL
        +CSICL +FAR DSVC L  CSHVFHF+CIEKWLERN FTCPLCRC  FFNI NRHE+    FVVPDNPSCL
Subjt:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRC--FFNIENRHEKLHFSFVVPDNPSCL

A0A6J1I5X8 RING-H2 finger protein ATL182.0e-2376.39Show/hide
Query:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRC--FFNIENRHEKLHFSFVVPDNPSCL
        +CSICL +FAR DSVC L  CSHVFHF+CIEKWLERN FTCPLCRC  FFNI NRHE+    FVVPDNPSCL
Subjt:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRC--FFNIENRHEKLHFSFVVPDNPSCL

SwissProt top hitse value%identityAlignment
Q6NKR1 RING-H2 finger protein ATL281.2e-0753.33Show/hide
Query:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRC
        C+ICL++F+ ED+V  ++ C H FH NCI+ W E  H TCP+CRC
Subjt:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRC

Q8GW38 RING-H2 finger protein ATL471.5e-0742.62Show/hide
Query:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCR-CFFNIENRHEKLHFSF
        C++CL +F+ +D +  L +CSH FH +CI+ WL  N  TCPLCR   F++ ++ E   F+F
Subjt:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCR-CFFNIENRHEKLHFSF

Q9FL07 RING-H2 finger protein ATL461.5e-0752.27Show/hide
Query:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCR
        C++CL +F+ +D +  L  CSH FH NCI+ WL+ N  TCPLCR
Subjt:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCR

Q9LQM2 RING-H2 finger protein ATL816.8e-0848.08Show/hide
Query:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENR
        CSICLT+F  +D++  +S+C+H FH  CI+ W E  H TCP+CR   ++E+R
Subjt:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENR

Q9SZL4 RING-H2 finger protein ATL182.3e-1150.82Show/hide
Query:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFF--------NIENRH
        C ICL +F  ED+V  L  C+H+FH NCIE WL R H TCPLCR F         N+ N H
Subjt:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFF--------NIENRH

Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein2.8e-0952.27Show/hide
Query:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCR
        C +CL  F  E+ V EL SC H FH  C++ W   NH TCPLCR
Subjt:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCR

AT1G32361.1 RING/U-box superfamily protein4.8e-0948.08Show/hide
Query:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENR
        CSICLT+F  +D++  +S+C+H FH  CI+ W E  H TCP+CR   ++E+R
Subjt:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENR

AT1G67856.1 RING/U-box superfamily protein5.7e-1054.55Show/hide
Query:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCR
        C +CL  F  E+ V EL SC H FH  C++KW   NH TCPLCR
Subjt:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCR

AT3G43430.1 RING/U-box superfamily protein6.3e-0947.17Show/hide
Query:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWL--------ERNHFTCPLCR
        MC++CL     ED + EL +C+HVFH +CI++WL        + NH TCPLCR
Subjt:  MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWL--------ERNHFTCPLCR

AT4G38140.1 RING/U-box superfamily protein1.6e-1250.82Show/hide
Query:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFF--------NIENRH
        C ICL +F  ED+V  L  C+H+FH NCIE WL R H TCPLCR F         N+ N H
Subjt:  CSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFF--------NIENRH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTCCATCTGTTTGACGAAATTCGCGAGAGAAGATTCCGTGTGCGAATTGTCGTCTTGTTCACACGTTTTTCATTTCAATTGCATCGAGAAGTGGCTCGAGAGGAA
TCACTTCACTTGCCCGCTCTGTAGGTGCTTCTTCAACATCGAGAATCGCCATGAGAAGCTTCACTTCAGCTTCGTCGTTCCAGATAATCCTTCTTGCCTAACGAAGGGGT
TTTCCCCTTCGTTCCAGCTGGATTCGAAGGGGAAACCCCCTTCGTTTTTTTTAAACCTTGCAACAATGGGGGTGACCGACTGGAAGAACGAAAGGGCAGTGGGTTTCATG
ACCAGAGGGAAGAACGAAGAACGGGAGGGAGGTGTTGCGGTGTGGGTATGCTCGCCGGAAAACACACAGACGAGGGGGAGAAGTGGGTTTGCCGGCAACACAGGGAAGAA
AATAAGGAGAAAAAGAAAAGGAAAAAAAAGAAAAAAATGGCTCGTCGGTGGTCGGAAAACATACAGACGGCAGTCGACGCGGCGCCAATGGCTGGAAGAAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTCCATCTGTTTGACGAAATTCGCGAGAGAAGATTCCGTGTGCGAATTGTCGTCTTGTTCACACGTTTTTCATTTCAATTGCATCGAGAAGTGGCTCGAGAGGAA
TCACTTCACTTGCCCGCTCTGTAGGTGCTTCTTCAACATCGAGAATCGCCATGAGAAGCTTCACTTCAGCTTCGTCGTTCCAGATAATCCTTCTTGCCTAACGAAGGGGT
TTTCCCCTTCGTTCCAGCTGGATTCGAAGGGGAAACCCCCTTCGTTTTTTTTAAACCTTGCAACAATGGGGGTGACCGACTGGAAGAACGAAAGGGCAGTGGGTTTCATG
ACCAGAGGGAAGAACGAAGAACGGGAGGGAGGTGTTGCGGTGTGGGTATGCTCGCCGGAAAACACACAGACGAGGGGGAGAAGTGGGTTTGCCGGCAACACAGGGAAGAA
AATAAGGAGAAAAAGAAAAGGAAAAAAAAGAAAAAAATGGCTCGTCGGTGGTCGGAAAACATACAGACGGCAGTCGACGCGGCGCCAATGGCTGGAAGAAGAAGAATGA
Protein sequenceShow/hide protein sequence
MCSICLTKFAREDSVCELSSCSHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLHFSFVVPDNPSCLTKGFSPSFQLDSKGKPPSFFLNLATMGVTDWKNERAVGFM
TRGKNEEREGGVAVWVCSPENTQTRGRSGFAGNTGKKIRRKRKGKKRKKWLVGGRKTYRRQSTRRQWLEEEE