; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021861 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021861
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNeuronal PAS domain-containing protein 4
Genome locationchr7:13105365..13106526
RNA-Seq ExpressionLag0021861
SyntenyLag0021861
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE1298543.1 unnamed protein product [Sepia pharaonis]1.6e-1331.46Show/hide
Query:  PLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQAEFRMVTR
        P +   F     P HL S S  P +         P HL S S    I   F     P HL S S  P I   F     P  L S S  P I         
Subjt:  PLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQAEFRMVTR

Query:  PSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPLIQAEFRMITCPLAPPTFEDGAM
        P+HL+SSS  P+I   F     P HL S S    I       + P HL S S  P I   F     P HL S S  P I   FR+   PL          
Subjt:  PSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPLIQAEFRMITCPLAPPTFEDGAM

Query:  PTM--KMKRHPTP
        P +      HP P
Subjt:  PTM--KMKRHPTP

CAE1318706.1 unnamed protein product [Sepia pharaonis]4.4e-1131.75Show/hide
Query:  NLTLGSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQ
        +L   S  P I         P H  S+S  P +   F   T P  L   S  P I       T PSHL S S  P +   F   T P+HL S S  P I 
Subjt:  NLTLGSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQ

Query:  AEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPLIQAEFRMITCPLAP
          F   + P HL+  S   +I         PSHL S S    I       + PSHL   S  P I         P HL S S  P I   FR+   PL P
Subjt:  AEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPLIQAEFRMITCPLAP

Query:  PTFEDGAMPTM
              A P +
Subjt:  PTFEDGAMPTM

CAE1322405.1 unnamed protein product [Sepia pharaonis]1.7e-1835.86Show/hide
Query:  NLTLGSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQ
        +L   S  P I         PSHL S+S  P +         P+HL S S  P I         PSHL S SD P I         P+HL S SD P I 
Subjt:  NLTLGSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQ

Query:  AEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPLIQAEFRMITCPL
                PSHL+SSS  P I         PSHL S SD P I         P+HL S S  P I         P+HL S S  P I   FR+   PL
Subjt:  AEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPLIQAEFRMITCPL

KAG7335348.1 hypothetical protein KOW79_001944 [Hemibagrus wyckioides]1.1e-1123.88Show/hide
Query:  LGSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVT--------SPSHLASDSDQPLIQVEFRMVTRPSHLTSGSD
        L S   LI     ++T   H       PL+ +   ++TS  H    S   LI     ++T        SP HL + S   +      +++ P HL + S 
Subjt:  LGSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVT--------SPSHLASDSDQPLIQVEFRMVTRPSHLTSGSD

Query:  QPLIQAEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPLIQAEFRMIT
          L+ +   ++T    LI+SS   L+     ++T   HL + S   L+ +   +ITC  HL + S   +  +   ++T    L + S   +  +   +IT
Subjt:  QPLIQAEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPLIQAEFRMIT

Query:  C
        C
Subjt:  C

XP_036790364.1 proline-rich protein 36-like [Oncorhynchus mykiss]9.7e-1134.95Show/hide
Query:  NLTLGSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQ
        NL   S QPL  +     T P +L ++S QPL        T P +L + S QPL       +T P +L + S QPL  +     T PS+L + S QPL  
Subjt:  NLTLGSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQ

Query:  AEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPL
              T P +L +SS QPL        T PS+L + S QPL        T P +L + S QPL        T P +L + S QPL
Subjt:  AEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPL

TrEMBL top hitse value%identityAlignment
A0A0L0G9G2 Uncharacterized protein1.1e-0723.15Show/hide
Query:  NEVEDEANLTL-GSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHL-------ASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVT
        N V+ + N  +   +QP +Q    + T P+   ++ +QP +Q    + T P+ +        +D +QP +Q    + T P+   +D +QP +Q    + T
Subjt:  NEVEDEANLTL-GSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHL-------ASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVT

Query:  RPSHLTSGSDQPLIQAEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQP
         P+   +  +QP +Q    + T P+  ++  +QP +Q+   + T P+   +  +QP +Q +    T P    + + QP ++    + T P+   +  +QP
Subjt:  RPSHLTSGSDQPLIQAEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQP

Query:  LIQ
         +Q
Subjt:  LIQ

A0A1Q3HY78 Uncharacterized protein1.0e-0522.03Show/hide
Query:  MERGRSYQLPTLEMKRNEVEDEANLTLGSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLI
        ME    +  P  E    E + E   T   +QP+++ +      P   AS  +QP+M+A+    T      +   QP+++A+      P   AS  +QP++
Subjt:  MERGRSYQLPTLEMKRNEVEDEANLTLGSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLI

Query:  QVEFRMVTRPSHLTSGSDQPLIQAEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSH
        + +    T      +   QP+++A+      P     + +QP+      M  +P   T   +QP+++A+      P   T   +QP+++A+       + 
Subjt:  QVEFRMVTRPSHLTSGSDQPLIQAEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSH

Query:  LASGSDQPLIQAEFRMITCPLAPPTFE
         A+ ++QP+++A+    T     P  E
Subjt:  LASGSDQPLIQAEFRMITCPLAPPTFE

A0A1Q6BQB1 Uncharacterized protein2.4e-0723.58Show/hide
Query:  VTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQAEFRMVTRPSHLISSSD
        VT PS + S  D   +  +   VT PS + S  D      +   VT P+ + S  D      +   VT PS +TS         +   VT PS + S   
Subjt:  VTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQAEFRMVTRPSHLISSSD

Query:  QPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPLIQAEFRMITCPLAPPTFEDGAMPTMKMKRHP
              +   VT P+ +TS       + +   +T P+ +TS  +Q     +   VT P+ + S         +   +T P +  +   GA    ++    
Subjt:  QPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQPLIQAEFRMITCPLAPPTFEDGAMPTMKMKRHP

Query:  TP-SIADFGDEA
         P S+   G +A
Subjt:  TP-SIADFGDEA

A0A286UW21 Golgin subfamily A member 6 6-like protein1.3e-0528.57Show/hide
Query:  SDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQAEFRMVTRPSHLISSSDQPLIQEEFRM
        S+QP+++ E   +   S +    DQP+ Q E  +  S       S+QPL Q + + V +       S+QPL Q+E  +      L  S DQP+ +EE   
Subjt:  SDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQPLIQVEFRMVTRPSHLTSGSDQPLIQAEFRMVTRPSHLISSSDQPLIQEEFRM

Query:  VTRPSHLTSGSDQPLIQAEFRMITCPSHLTS-----GSDQPLIQAEFKMVTRPSHLASGSDQPLIQAE
              L    +QP I +E +    P +          +QPL Q+E + V +       S+QPL Q+E
Subjt:  VTRPSHLTSGSDQPLIQAEFRMITCPSHLTS-----GSDQPLIQAEFKMVTRPSHLASGSDQPLIQAE

A0A444SX38 S-antigen protein4.9e-0840.34Show/hide
Query:  FEDGAMPTMK-MKRHPTPSIADFGDEATPSIADFGDEVTSSIVDFEDEATPSISDFEDEVTPSIANFEDEVTPSIIDFEDEAMPSIAANFENQTKPSIAA
        FED A  TM+  +   T +  +  DEAT +  +F DE T++  +FEDEAT +  +FEDE T +   FEDE T +   FEDEA  +    FE++   +   
Subjt:  FEDGAMPTMK-MKRHPTPSIADFGDEATPSIADFGDEVTSSIVDFEDEATPSISDFEDEVTPSIANFEDEVTPSIIDFEDEAMPSIAANFENQTKPSIAA

Query:  NFEDEARPKSSTVNLEDEA
         FEDEA   ++T   EDEA
Subjt:  NFEDEARPKSSTVNLEDEA

SwissProt top hitse value%identityAlignment
Q8BGD7 Neuronal PAS domain-containing protein 47.0e-0434.78Show/hide
Query:  PTMKMKRHPTPSIADFGDEATPSIADFGDEVTSSIVDFEDEATPSISDFEDEVTPSIANFEDEVTPSIIDFEDEAMPSIAANFENQTKPSIA
        P+  ++   TPS   F ++ TPS A F D +TSS+     E+  S   FED++TP  ++F D++ PS   F +   P  +   E  T PS A
Subjt:  PTMKMKRHPTPSIADFGDEATPSIADFGDEVTSSIVDFEDEATPSISDFEDEVTPSIANFEDEVTPSIIDFEDEAMPSIAANFENQTKPSIA

Q8IUM7 Neuronal PAS domain-containing protein 45.4e-0434.78Show/hide
Query:  PTMKMKRHPTPSIADFGDEATPSIADFGDEVTSSIVDFEDEATPSISDFEDEVTPSIANFEDEVTPSIIDFEDEAMPSIAANFENQTKPSIA
        P+  ++   TPS A F D+ TPS A F D +TS +     E   S+  +ED++TP  + F D++ PS   F +   P  +   E  T PS A
Subjt:  PTMKMKRHPTPSIADFGDEATPSIADFGDEVTSSIVDFEDEATPSISDFEDEVTPSIANFEDEVTPSIIDFEDEAMPSIAANFENQTKPSIA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGAAATGAGGCCGTCAACCGCCAACATTTGAAGATGGAGCGAGGCCGAAGCTATCAACTGCCGACTTTGGAGATGAAGCGAAACGAGGTTGAAGATGAAGCGAA
TCTTACCTTAGGAAGTGATCAACCCCTGATTCAGGTGGAATTCAGGATGGTCACTCGCCCTTCACATCTTGCCTCAAACAGTGATCAACCCCTGATGCAGGCGGAATTCA
GGATGGTCACTAGCCCTTCACATCTTGCCTCAGACAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGGTCACTAGCCCTTCACATCTTGCCTCAGACAGTGATCAA
CCCCTGATTCAGGTGGAATTCAGGATGGTCACTCGCCCTTCACATCTTACCTCAGGTAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGGTCACTCGCCCTTCACA
TCTTATCTCAAGCAGTGATCAACCTCTAATTCAGGAGGAATTCAGGATGGTCACTCGCCCCTCACATCTTACCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCA
GGATGATCACTTGTCCTTCACATCTTACCTCAGGCAGCGATCAACCCCTGATTCAGGCGGAATTCAAGATGGTCACTCGCCCTTCACATCTTGCCTCAGGCAGCGATCAA
CCCCTGATTCAGGCGGAATTCAGGATGATCACTTGCCCACTTGCACCGCCAACCTTTGAAGATGGAGCGATGCCAACAATGAAGATGAAGCGACACCCGACGCCGTCAAT
CGCCGACTTTGGAGATGAAGCGACGCCGTCAATCGCCGACTTTGGAGATGAAGTGACGTCGTCAATCGTCGACTTTGAAGATGAAGCGACGCCGTCAATCTCCGACTTTG
AAGATGAAGTGACGCCGTCAATCGCCAACTTTGAAGATGAAGTGACGCCGTCAATCATCGACTTTGAAGATGAAGCGATGCCGTCAATTGCCGCCAACTTTGAGAATCAA
ACGAAGCCTTCAATTGCCGCCAACTTTGAGGATGAAGCGAGGCCAAAGTCGTCAACCGTCAACCTTGAAGATGAAGCAAAGTTAGAGCGACAACTCTTAGAGACAAAATA
A
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGAAATGAGGCCGTCAACCGCCAACATTTGAAGATGGAGCGAGGCCGAAGCTATCAACTGCCGACTTTGGAGATGAAGCGAAACGAGGTTGAAGATGAAGCGAA
TCTTACCTTAGGAAGTGATCAACCCCTGATTCAGGTGGAATTCAGGATGGTCACTCGCCCTTCACATCTTGCCTCAAACAGTGATCAACCCCTGATGCAGGCGGAATTCA
GGATGGTCACTAGCCCTTCACATCTTGCCTCAGACAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGGTCACTAGCCCTTCACATCTTGCCTCAGACAGTGATCAA
CCCCTGATTCAGGTGGAATTCAGGATGGTCACTCGCCCTTCACATCTTACCTCAGGTAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGGTCACTCGCCCTTCACA
TCTTATCTCAAGCAGTGATCAACCTCTAATTCAGGAGGAATTCAGGATGGTCACTCGCCCCTCACATCTTACCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCA
GGATGATCACTTGTCCTTCACATCTTACCTCAGGCAGCGATCAACCCCTGATTCAGGCGGAATTCAAGATGGTCACTCGCCCTTCACATCTTGCCTCAGGCAGCGATCAA
CCCCTGATTCAGGCGGAATTCAGGATGATCACTTGCCCACTTGCACCGCCAACCTTTGAAGATGGAGCGATGCCAACAATGAAGATGAAGCGACACCCGACGCCGTCAAT
CGCCGACTTTGGAGATGAAGCGACGCCGTCAATCGCCGACTTTGGAGATGAAGTGACGTCGTCAATCGTCGACTTTGAAGATGAAGCGACGCCGTCAATCTCCGACTTTG
AAGATGAAGTGACGCCGTCAATCGCCAACTTTGAAGATGAAGTGACGCCGTCAATCATCGACTTTGAAGATGAAGCGATGCCGTCAATTGCCGCCAACTTTGAGAATCAA
ACGAAGCCTTCAATTGCCGCCAACTTTGAGGATGAAGCGAGGCCAAAGTCGTCAACCGTCAACCTTGAAGATGAAGCAAAGTTAGAGCGACAACTCTTAGAGACAAAATA
A
Protein sequenceShow/hide protein sequence
MERNEAVNRQHLKMERGRSYQLPTLEMKRNEVEDEANLTLGSDQPLIQVEFRMVTRPSHLASNSDQPLMQAEFRMVTSPSHLASDSDQPLIQAEFRMVTSPSHLASDSDQ
PLIQVEFRMVTRPSHLTSGSDQPLIQAEFRMVTRPSHLISSSDQPLIQEEFRMVTRPSHLTSGSDQPLIQAEFRMITCPSHLTSGSDQPLIQAEFKMVTRPSHLASGSDQ
PLIQAEFRMITCPLAPPTFEDGAMPTMKMKRHPTPSIADFGDEATPSIADFGDEVTSSIVDFEDEATPSISDFEDEVTPSIANFEDEVTPSIIDFEDEAMPSIAANFENQ
TKPSIAANFEDEARPKSSTVNLEDEAKLERQLLETK