; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021888 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021888
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr7:13514882..13516233
RNA-Seq ExpressionLag0021888
SyntenyLag0021888
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582003.1 hypothetical protein SDJN03_22005, partial [Cucurbita argyrosperma subsp. sororia]6.8e-10784.85Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPP+IICGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI
        RQNELELSLQV+KFMR+E+W EPD++LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAVE Y LMKASGC PDKLTFKI
Subjt:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI

Query:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFL
        L KNLE+F E+FA VVKKECAE+LDSPEKFL
Subjt:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFL

XP_022955796.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita moschata]3.4e-10684.42Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPP+ ICGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI
        RQNELELSLQV+KFMR+E+W EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAVE Y LMKASGC PDKLTFKI
Subjt:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI

Query:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFL
        L KNLE+F E+FA VVKKECAE+LDSPEKFL
Subjt:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFL

XP_022980054.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita maxima]7.2e-10982.92Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ H PQLG RQNLTNP +HCCTA PPPNIICGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI
        RQNELELSLQV+KFMR+E+W EPD+ LYH MI M+GKNK+IEMAEE+FH+ K+DGLEPDTRAFNEMMGAYLQV MVERAVE Y LMKASGCTPDKLTFKI
Subjt:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI

Query:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK
        L KNLE+F E+FA VVKKECAE+LDSPEKFL +VE +L+K
Subjt:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK

XP_023527118.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita pepo subsp. pepo]1.9e-10983.33Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPPNIICGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI
        RQNELELSLQV+KFMR+E+W EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAY+QV MVERAVE Y LMKASGC PDKLTFKI
Subjt:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI

Query:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK
        L KNLE+F E+FA VVKKECAE+LDSPEKFL +VE +L+K
Subjt:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK

XP_038878176.1 pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida]1.1e-10986.38Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MG L+FHFPQLGLRQ+LTNP +HCCTAAPPPNIICGLRKGLRKPLGRSRVPS EAIQAVQSLKLAKS SKMEDVINSKLSRLLKADLFDALTELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI
        RQNELELSLQV+KF+++E+W EPD+ LYHGMILM GKNK+IEMAEEIFH+LKKDGLEPD RAFNEMMGAYLQV MVERAVE Y LMKASGCTPDKLTFKI
Subjt:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI

Query:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVE
        L KNLEKF E+FA VVKKEC  YLDSPEKFL++VE
Subjt:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVE

TrEMBL top hitse value%identityAlignment
A0A1S3BX97 pentatricopeptide repeat-containing protein At1g62350-like4.0e-10581.12Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFP+LGLRQNLTN  +HCCTAAPPPNIICGLRKGL+KPLGRSRVPS EAIQAVQSLKLAK  SKMEDVIN+KLSRLLKADLFDALTELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI
        RQNELELSLQV+KFM++E+W EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA + Y LM ASGCTPDKLTFKI
Subjt:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI

Query:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN
        L KNLEKF E+FA VVKK+C EYLD+P+KF ++
Subjt:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN

A0A5A7TQZ8 Pentatricopeptide repeat-containing protein1.8e-10581.55Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFPQLGLRQNLTN  +HCCTAAPPPNIICGLRKGL+KPLGRSRVPS EAIQAVQSLKLAK  SKMEDVIN+KLSRLLKADLFDALTELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI
        RQNELELSLQV+KFM++E+W EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA + Y LM ASGCTPDKLTFKI
Subjt:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI

Query:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN
        L KNLEKF E+FA VVKK+C EYLD+P+KF ++
Subjt:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN

A0A5D3CZ95 Pentatricopeptide repeat-containing protein4.0e-10581.12Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFP+LGLRQNLTN  +HCCTAAPPPNIICGLRKGL+KPLGRSRVPS EAIQAVQSLKLAK  SKMEDVIN+KLSRLLKADLFDALTELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI
        RQNELELSLQV+KFM++E+W EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA + Y LM ASGCTPDKLTFKI
Subjt:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI

Query:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN
        L KNLEKF E+FA VVKK+C EYLD+P+KF ++
Subjt:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN

A0A6J1GUU8 pentatricopeptide repeat-containing protein At1g62350-like1.6e-10684.42Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPP+ ICGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI
        RQNELELSLQV+KFMR+E+W EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAVE Y LMKASGC PDKLTFKI
Subjt:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI

Query:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFL
        L KNLE+F E+FA VVKKECAE+LDSPEKFL
Subjt:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFL

A0A6J1IY98 pentatricopeptide repeat-containing protein At1g62350-like3.5e-10982.92Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ H PQLG RQNLTNP +HCCTA PPPNIICGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI
        RQNELELSLQV+KFMR+E+W EPD+ LYH MI M+GKNK+IEMAEE+FH+ K+DGLEPDTRAFNEMMGAYLQV MVERAVE Y LMKASGCTPDKLTFKI
Subjt:  RQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKI

Query:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK
        L KNLE+F E+FA VVKKECAE+LDSPEKFL +VE +L+K
Subjt:  LFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK

SwissProt top hitse value%identityAlignment
O82178 Pentatricopeptide repeat-containing protein At2g351304.2e-1135.79Show/hide
Query:  LSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKIL
        +S ++Y  MR     +P+I  Y  ++    +  L E AEEIF +L++DGLEPD   +N +M +Y + G    A E++ LM+  GC PD+ ++ I+
Subjt:  LSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKIL

Q1PFH7 Pentatricopeptide repeat-containing protein At1g623507.2e-1932.93Show/hide
Query:  STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDG
        S E + A + LK  ++ S +++  I S +SRLLK+DL   L E QRQN++ L +++Y+ +R E W  PD+  Y  M++ML +NK ++  ++++ +LKK+ 
Subjt:  STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDG

Query:  LEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAE
        +  D   F +++  +L   +   A+ +YG M+ S   P  L F+++ K L  + E   E VK +  E
Subjt:  LEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAE

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic9.5e-1128.1Show/hide
Query:  SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELK
        +++ S +AI  +   +  KS  + +      L R +   L + +T L+     E ++QV++ +R++ W +P++ +Y  +I+MLGK K  E A E+F E+ 
Subjt:  SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELK

Query:  KDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKAS-GCTPDKLTFKILFKN
         +G   +   +  ++ AY + G  + A  +   MK+S  C PD  T+ IL K+
Subjt:  KDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKAS-GCTPDKLTFKILFKN

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic6.5e-1231.84Show/hide
Query:  NIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLG
        +I CG R   R PL + R+ STEAIQ++QSLK A        +    L RL+K+DL   L EL RQ+   L++ V   +R E +   D+ LY  ++  L 
Subjt:  NIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLG

Query:  KNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASG-----CTPDKLTFKILFKNLEKFGE
        +NK  +  + +  E+       D +A  +++ A +     E  V +Y LM+ SG        D+   ++L K L + GE
Subjt:  KNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASG-----CTPDKLTFKILFKNLEKFGE

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic4.0e-1730.43Show/hide
Query:  RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMA
        R PL R  ++   EA+  +  LK L +   K++  I + + RLLK D+   + EL+RQ E  L++++++ ++ ++W +PD+ +Y  +I+ L K+K ++ A
Subjt:  RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMA

Query:  EEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNL
          ++ ++KK+ L PD++ + E++  +L+ G    A+ +Y  M  S   P++L F++L K L
Subjt:  EEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNL

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein5.1e-2032.93Show/hide
Query:  STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDG
        S E + A + LK  ++ S +++  I S +SRLLK+DL   L E QRQN++ L +++Y+ +R E W  PD+  Y  M++ML +NK ++  ++++ +LKK+ 
Subjt:  STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDG

Query:  LEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAE
        +  D   F +++  +L   +   A+ +YG M+ S   P  L F+++ K L  + E   E VK +  E
Subjt:  LEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAE

AT3G27750.1 FUNCTIONS IN: molecular_function unknown4.7e-1331.84Show/hide
Query:  NIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLG
        +I CG R   R PL + R+ STEAIQ++QSLK A        +    L RL+K+DL   L EL RQ+   L++ V   +R E +   D+ LY  ++  L 
Subjt:  NIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLG

Query:  KNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASG-----CTPDKLTFKILFKNLEKFGE
        +NK  +  + +  E+       D +A  +++ A +     E  V +Y LM+ SG        D+   ++L K L + GE
Subjt:  KNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASG-----CTPDKLTFKILFKNLEKFGE

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein2.8e-1830.43Show/hide
Query:  RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMA
        R PL R  ++   EA+  +  LK L +   K++  I + + RLLK D+   + EL+RQ E  L++++++ ++ ++W +PD+ +Y  +I+ L K+K ++ A
Subjt:  RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMA

Query:  EEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNL
          ++ ++KK+ L PD++ + E++  +L+ G    A+ +Y  M  S   P++L F++L K L
Subjt:  EEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNL

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain1.0e-2333.33Show/hide
Query:  RKPLGRSRVPSTEAIQAVQSLKLA----------------KSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHG
        RKPL R R+ S EAIQAVQ+LK A                 S++ ++ VI SK  RLLK D+   L EL RQNE  L+L+V++ +R E W +P + +Y  
Subjt:  RKPLGRSRVPSTEAIQAVQSLKLA----------------KSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHG

Query:  MILMLGKNKLIEMAEEIFHELKKD-GLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNLEKFGEK-FAEVVKKECAEYLDSPE
        MI ++  N L+E    ++  +K + GL  +   FN ++   L   + +  ++ Y  M++ G  PD+ +F++L   LE  GE   + +V+++  EY     
Subjt:  MILMLGKNKLIEMAEEIFHELKKD-GLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNLEKFGEK-FAEVVKKECAEYLDSPE

Query:  KFLDNVE
        +F++  E
Subjt:  KFLDNVE

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein6.7e-1228.1Show/hide
Query:  SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELK
        +++ S +AI  +   +  KS  + +      L R +   L + +T L+     E ++QV++ +R++ W +P++ +Y  +I+MLGK K  E A E+F E+ 
Subjt:  SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELK

Query:  KDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKAS-GCTPDKLTFKILFKN
         +G   +   +  ++ AY + G  + A  +   MK+S  C PD  T+ IL K+
Subjt:  KDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKAS-GCTPDKLTFKILFKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAATTCCTCCCATTTGAACTGAGTTTCTCGCAAAAGAGGTGGTCGCCGGTGGAGGAGATGAAATCTATTGTAATGGGTCGTCTAGAATTCCATTTTCCTCAATT
GGGTCTACGCCAAAACCTCACAAACCCAGGCGTCCATTGTTGTACGGCAGCTCCACCTCCAAATATCATCTGCGGCCTCAGGAAAGGCCTTAGGAAGCCCTTGGGGAGGT
CAAGGGTGCCCTCCACTGAGGCCATTCAGGCAGTTCAGTCCCTCAAGCTCGCTAAATCCGCCTCAAAAATGGAGGACGTAATCAATAGCAAACTCAGCAGATTGCTGAAA
GCAGACTTGTTTGATGCTCTGACTGAATTACAGAGACAAAATGAACTGGAACTATCGCTCCAGGTCTATAAATTTATGCGTGATGAAGATTGGGTCGAGCCAGATATAAC
CTTGTACCATGGGATGATTCTGATGTTGGGAAAGAACAAACTGATCGAAATGGCTGAAGAGATCTTCCATGAGTTAAAAAAGGATGGCTTAGAACCAGACACAAGAGCTT
TTAATGAGATGATGGGAGCATATTTGCAAGTGGGCATGGTCGAAAGAGCGGTTGAGATGTATGGATTAATGAAAGCATCAGGTTGTACTCCAGATAAACTGACTTTCAAA
ATTTTGTTCAAGAATCTCGAGAAGTTTGGGGAAAAGTTTGCTGAAGTGGTGAAGAAAGAATGTGCTGAGTACTTGGATTCTCCTGAGAAGTTCCTCGACAATGTTGAATG
GAGACTCGTAAAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAATTCCTCCCATTTGAACTGAGTTTCTCGCAAAAGAGGTGGTCGCCGGTGGAGGAGATGAAATCTATTGTAATGGGTCGTCTAGAATTCCATTTTCCTCAATT
GGGTCTACGCCAAAACCTCACAAACCCAGGCGTCCATTGTTGTACGGCAGCTCCACCTCCAAATATCATCTGCGGCCTCAGGAAAGGCCTTAGGAAGCCCTTGGGGAGGT
CAAGGGTGCCCTCCACTGAGGCCATTCAGGCAGTTCAGTCCCTCAAGCTCGCTAAATCCGCCTCAAAAATGGAGGACGTAATCAATAGCAAACTCAGCAGATTGCTGAAA
GCAGACTTGTTTGATGCTCTGACTGAATTACAGAGACAAAATGAACTGGAACTATCGCTCCAGGTCTATAAATTTATGCGTGATGAAGATTGGGTCGAGCCAGATATAAC
CTTGTACCATGGGATGATTCTGATGTTGGGAAAGAACAAACTGATCGAAATGGCTGAAGAGATCTTCCATGAGTTAAAAAAGGATGGCTTAGAACCAGACACAAGAGCTT
TTAATGAGATGATGGGAGCATATTTGCAAGTGGGCATGGTCGAAAGAGCGGTTGAGATGTATGGATTAATGAAAGCATCAGGTTGTACTCCAGATAAACTGACTTTCAAA
ATTTTGTTCAAGAATCTCGAGAAGTTTGGGGAAAAGTTTGCTGAAGTGGTGAAGAAAGAATGTGCTGAGTACTTGGATTCTCCTGAGAAGTTCCTCGACAATGTTGAATG
GAGACTCGTAAAAGATTGA
Protein sequenceShow/hide protein sequence
MVKFLPFELSFSQKRWSPVEEMKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLK
ADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFK
ILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVKD