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Lag0021919 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021919
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr7:13916772..13918150
RNA-Seq ExpressionLag0021919
SyntenyLag0021919
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]8.0e-1532.94Show/hide
Query:  KEEEARKAEEDVCVSREKAGAKELPKHQEK------LRSRGRHSFASSTILPGQNNRSQNCE------CNIVREFYANLDIKNDFEVIVRGVPVQWSPEA
        K  +A K E +   +R +   +  P + EK        + G+  F +  I   Q+N  Q C         +VREFYANL    +  V VRGV V WS EA
Subjt:  KEEEARKAEEDVCVSREKAGAKELPKHQEK------LRSRGRHSFASSTILPGQNNRSQNCE------CNIVREFYANLDIKNDFEVIVRGVPVQWSPEA

Query:  INEMFDLQD--FPHAVFNE-------------MVVAPSSDQLSAVSG-------------------RLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGK
        IN +F L D    H+ F E             + VA +   +SA                      +  LLPTTH  TVS+DR+LL  ++L   SI+VG+
Subjt:  INEMFDLQD--FPHAVFNE-------------MVVAPSSDQLSAVSG-------------------RLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGK

Query:  IISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL
        +I SEI  C  +K G LFFP+ IT LC  A  P +  +  + + G ID   + R+
Subjt:  IISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]9.4e-1632.94Show/hide
Query:  KEEEARKAEEDVCVSREKAGAKELPKHQEK------LRSRGRHSFASSTILPGQNNRSQNCE------CNIVREFYANLDIKNDFEVIVRGVPVQWSPEA
        K  +A K E +   +R +   +  P + EK        + G+  F +  I   Q+N  Q C         +VREFYANL    +  V VRGV V WS EA
Subjt:  KEEEARKAEEDVCVSREKAGAKELPKHQEK------LRSRGRHSFASSTILPGQNNRSQNCE------CNIVREFYANLDIKNDFEVIVRGVPVQWSPEA

Query:  INEMFDLQD--FPHAVF------------NEMVVAPSSDQLSAVSG--------------------RLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGK
        IN +F L D    H+ F             E V A  ++   +  G                    + RLLPTTH  TVS+DR+LL  ++L   SI+VG+
Subjt:  INEMFDLQD--FPHAVF------------NEMVVAPSSDQLSAVSG--------------------RLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGK

Query:  IISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL
        +I SEI  C  +K G LFFP+ IT LC  A  P +  +  + + G ID   + R+
Subjt:  IISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]2.3e-1433.51Show/hide
Query:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQDF--PHAVFNEMVVAPSSD---QLSAVSG-----------------------------RLRL
        +VREFY NL   +D  V VRGV V  S EAIN ++ L D    H+ F E +  P      +  A++G                             + RL
Subjt:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQDF--PHAVFNEMVVAPSSD---QLSAVSG-----------------------------RLRL

Query:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL
        LPTTH   VS++RVLL +++L   SI++G++I  EI  C  +K G LFFP+ I  +C  A  P +  +  + + G ID   + R+
Subjt:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]2.2e-1234.97Show/hide
Query:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQD--FPHAVFNEMVVAPSSD---QLSAVSG-----------------------------RLRL
        +VREFY N+   +D  V +RGV V  S EAIN +F L D    H+ F E +  P      +  A+ G                             + RL
Subjt:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQD--FPHAVFNEMVVAPSSD---QLSAVSG-----------------------------RLRL

Query:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVP
        LPTTH  TVS++ V L +++L   SI+VG++I  EI  C  +K G LFFP+ IT +C     P
Subjt:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVP

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.2e-1535.68Show/hide
Query:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQD--FPHAVFNEMVVAPS----SDQLSAVSG----------------------------RLRL
        +VREFYANL    +  + VRGV V WS EAIN +F L D    H+ F E +  P      + ++A                               + RL
Subjt:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQD--FPHAVFNEMVVAPS----SDQLSAVSG----------------------------RLRL

Query:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL
        LPTTH   VS+DR+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P +  +  + + G ID   + R+
Subjt:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.9e-1532.94Show/hide
Query:  KEEEARKAEEDVCVSREKAGAKELPKHQEK------LRSRGRHSFASSTILPGQNNRSQNCE------CNIVREFYANLDIKNDFEVIVRGVPVQWSPEA
        K  +A K E +   +R +   +  P + EK        + G+  F +  I   Q+N  Q C         +VREFYANL    +  V VRGV V WS EA
Subjt:  KEEEARKAEEDVCVSREKAGAKELPKHQEK------LRSRGRHSFASSTILPGQNNRSQNCE------CNIVREFYANLDIKNDFEVIVRGVPVQWSPEA

Query:  INEMFDLQD--FPHAVFNE-------------MVVAPSSDQLSAVSG-------------------RLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGK
        IN +F L D    H+ F E             + VA +   +SA                      +  LLPTTH  TVS+DR+LL  ++L   SI+VG+
Subjt:  INEMFDLQD--FPHAVFNE-------------MVVAPSSDQLSAVSG-------------------RLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGK

Query:  IISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL
        +I SEI  C  +K G LFFP+ IT LC  A  P +  +  + + G ID   + R+
Subjt:  IISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL

A0A2P5BCG4 Uncharacterized protein (Fragment)4.6e-1632.94Show/hide
Query:  KEEEARKAEEDVCVSREKAGAKELPKHQEK------LRSRGRHSFASSTILPGQNNRSQNCE------CNIVREFYANLDIKNDFEVIVRGVPVQWSPEA
        K  +A K E +   +R +   +  P + EK        + G+  F +  I   Q+N  Q C         +VREFYANL    +  V VRGV V WS EA
Subjt:  KEEEARKAEEDVCVSREKAGAKELPKHQEK------LRSRGRHSFASSTILPGQNNRSQNCE------CNIVREFYANLDIKNDFEVIVRGVPVQWSPEA

Query:  INEMFDLQD--FPHAVF------------NEMVVAPSSDQLSAVSG--------------------RLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGK
        IN +F L D    H+ F             E V A  ++   +  G                    + RLLPTTH  TVS+DR+LL  ++L   SI+VG+
Subjt:  INEMFDLQD--FPHAVF------------NEMVVAPSSDQLSAVSG--------------------RLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGK

Query:  IISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL
        +I SEI  C  +K G LFFP+ IT LC  A  P +  +  + + G ID   + R+
Subjt:  IISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL

A0A2P5BNT0 Uncharacterized protein (Fragment)1.1e-1433.51Show/hide
Query:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQDF--PHAVFNEMVVAPSSD---QLSAVSG-----------------------------RLRL
        +VREFY NL   +D  V VRGV V  S EAIN ++ L D    H+ F E +  P      +  A++G                             + RL
Subjt:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQDF--PHAVFNEMVVAPSSD---QLSAVSG-----------------------------RLRL

Query:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL
        LPTTH   VS++RVLL +++L   SI++G++I  EI  C  +K G LFFP+ I  +C  A  P +  +  + + G ID   + R+
Subjt:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL

A0A2P5DAQ2 Uncharacterized protein1.1e-1234.97Show/hide
Query:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQD--FPHAVFNEMVVAPSSD---QLSAVSG-----------------------------RLRL
        +VREFY N+   +D  V +RGV V  S EAIN +F L D    H+ F E +  P      +  A+ G                             + RL
Subjt:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQD--FPHAVFNEMVVAPSSD---QLSAVSG-----------------------------RLRL

Query:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVP
        LPTTH  TVS++ V L +++L   SI+VG++I  EI  C  +K G LFFP+ IT +C     P
Subjt:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVP

A0A2P5DXM3 Uncharacterized protein6.0e-1635.68Show/hide
Query:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQD--FPHAVFNEMVVAPS----SDQLSAVSG----------------------------RLRL
        +VREFYANL    +  + VRGV V WS EAIN +F L D    H+ F E +  P      + ++A                               + RL
Subjt:  IVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQD--FPHAVFNEMVVAPS----SDQLSAVSG----------------------------RLRL

Query:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL
        LPTTH   VS+DR+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P +  +  + + G ID   + R+
Subjt:  LPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAACAAGAGCTCGAAAAGAGAGGGAGAGTGTAGAGGAGGAGGTACCGGTCACACCGGAAGTTCAGAAAGTAAAAACTAAGAAAAAGAGAACGCCAGAAGAGAA
GGAGGCTAAGCGAAGAAGAAGACAGCAGAGAGTTGAAGAACAAGAAAGAGCGAGAGAGGAGGAGGTGTTGCAAGAGAAGATGAAGAACCAAAAGAATCTGACAAACCGAC
TCAAGAAAAGGATGAACAGAACGCCGCCGCATCAAAAGGAAGGCGGGTCGCGTGAGGTGGTTCGGAACACTCCATCACCTCCGACGTCGGACTCTGAGGAAGAAAGAAGG
GAAGCTGAGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGGCAGAGGAAGACGTTTGCGTGTCCAGAGAGAAAGCAGGGGCAAAGGAATTGCCGAAGCATCAGGAGAAATT
GAGGAGCCGAGGGCGCCATTCATTCGCTTCGTCAACGATCTTGCCCGGGCAAAATAACAGGAGCCAGAACTGTGAATGCAACATTGTTCGAGAATTTTACGCCAACCTTG
ACATTAAGAATGATTTTGAGGTTATTGTTCGAGGAGTGCCTGTACAGTGGAGCCCTGAGGCCATCAATGAAATGTTCGATCTCCAAGATTTTCCGCATGCCGTTTTTAAT
GAGATGGTGGTTGCACCATCTAGTGATCAACTGAGTGCGGTGTCCGGGAGGCTACGCTTGCTGCCGACAACACACGACTCCACAGTATCTCGGGACAGGGTATTGCTTGC
CTTTGCCATTCTTCGCTCGATGAGTATAGATGTAGGAAAGATAATTTCTTCTGAGATTGTTGATTGCTGGAAGAAGAAGGTGGGGAAGCTGTTCTTTCCAAACACTATCA
CGATGTTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAAGATATGATCATGACTGATAAGGGAATCATTGACACACCTAATCTGGTGCGGCTTCAGCGTATGCAAGAG
TTCGCCAGGGAGGGCTGGTGTATGGCGTTAATCAAATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAACAAGAGCTCGAAAAGAGAGGGAGAGTGTAGAGGAGGAGGTACCGGTCACACCGGAAGTTCAGAAAGTAAAAACTAAGAAAAAGAGAACGCCAGAAGAGAA
GGAGGCTAAGCGAAGAAGAAGACAGCAGAGAGTTGAAGAACAAGAAAGAGCGAGAGAGGAGGAGGTGTTGCAAGAGAAGATGAAGAACCAAAAGAATCTGACAAACCGAC
TCAAGAAAAGGATGAACAGAACGCCGCCGCATCAAAAGGAAGGCGGGTCGCGTGAGGTGGTTCGGAACACTCCATCACCTCCGACGTCGGACTCTGAGGAAGAAAGAAGG
GAAGCTGAGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGGCAGAGGAAGACGTTTGCGTGTCCAGAGAGAAAGCAGGGGCAAAGGAATTGCCGAAGCATCAGGAGAAATT
GAGGAGCCGAGGGCGCCATTCATTCGCTTCGTCAACGATCTTGCCCGGGCAAAATAACAGGAGCCAGAACTGTGAATGCAACATTGTTCGAGAATTTTACGCCAACCTTG
ACATTAAGAATGATTTTGAGGTTATTGTTCGAGGAGTGCCTGTACAGTGGAGCCCTGAGGCCATCAATGAAATGTTCGATCTCCAAGATTTTCCGCATGCCGTTTTTAAT
GAGATGGTGGTTGCACCATCTAGTGATCAACTGAGTGCGGTGTCCGGGAGGCTACGCTTGCTGCCGACAACACACGACTCCACAGTATCTCGGGACAGGGTATTGCTTGC
CTTTGCCATTCTTCGCTCGATGAGTATAGATGTAGGAAAGATAATTTCTTCTGAGATTGTTGATTGCTGGAAGAAGAAGGTGGGGAAGCTGTTCTTTCCAAACACTATCA
CGATGTTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAAGATATGATCATGACTGATAAGGGAATCATTGACACACCTAATCTGGTGCGGCTTCAGCGTATGCAAGAG
TTCGCCAGGGAGGGCTGGTGTATGGCGTTAATCAAATCCTAG
Protein sequenceShow/hide protein sequence
MAKTRARKERESVEEEVPVTPEVQKVKTKKKRTPEEKEAKRRRRQQRVEEQERAREEEVLQEKMKNQKNLTNRLKKRMNRTPPHQKEGGSREVVRNTPSPPTSDSEEERR
EAENKEKEEEARKAEEDVCVSREKAGAKELPKHQEKLRSRGRHSFASSTILPGQNNRSQNCECNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINEMFDLQDFPHAVFN
EMVVAPSSDQLSAVSGRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRLQRMQE
FAREGWCMALIKS