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Lag0021923 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021923
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr7:13956839..13957168
RNA-Seq ExpressionLag0021923
SyntenyLag0021923
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]1.4e-1345.79Show/hide
Query:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY
        R E + + +ER+PPP    +++++   ++  E D S++ +DDQVTL+G P    RR+G G  R RGRGR YQN QRRA  E +  + N+ +IK K+PKF+
Subjt:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY

Query:  GKTDPKE
         KTDPKE
Subjt:  GKTDPKE

KAA0047036.1 uncharacterized protein E6C27_scaffold829G00200 [Cucumis melo var. makuwa]2.4e-1343.93Show/hide
Query:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY
        RLE + + +ER+PPP    + +++    + YE D  ++ +DDQVTL+  P    RR+G G  R RG G+ YQN QRR   E   ++RN+ +IK K+PKF+
Subjt:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY

Query:  GKTDPKE
        GKTDP+E
Subjt:  GKTDPKE

TYK09709.1 uncharacterized protein E5676_scaffold447G001250 [Cucumis melo var. makuwa]1.4e-1345.79Show/hide
Query:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY
        R E + + +ER+PPP    +++++   ++  E D S++ +DDQVTL+G P    RR+G G  R RGRGR YQN QRRA  E +  + N+ +IK K+PKF+
Subjt:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY

Query:  GKTDPKE
         KTDPKE
Subjt:  GKTDPKE

XP_022152309.1 uncharacterized protein LOC111020057 [Momordica charantia]6.2e-1463.41Show/hide
Query:  EHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRA-RGRGRGYQ-NFQRRAPWEEAHVDRNLGSIKLKLPKFYGKTDPKE
        E++ E+  S++ EDDQVTL+   R G+RR G   HR  RGRGRG Q N+QRRAP EEA VDRNLGSIKLK+ KF+GKTDP+E
Subjt:  EHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRA-RGRGRGYQ-NFQRRAPWEEAHVDRNLGSIKLKLPKFYGKTDPKE

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]4.3e-2359.26Show/hide
Query:  MGRLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPK
        +GRLETQ Q + R+PPPP  RV+      E +YE D S+  EDDQ T++  PRGG+  +G G  R RGRGRGY NFQ RAP   A VDRNLG+IKLKL K
Subjt:  MGRLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPK

Query:  FYGKTDPK
        FYGKTDP+
Subjt:  FYGKTDPK

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein6.7e-1445.79Show/hide
Query:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY
        R E + + +ER+PPP    +++++   ++  E D S++ +DDQVTL+G P    RR+G G  R RGRGR YQN QRRA  E +  + N+ +IK K+PKF+
Subjt:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY

Query:  GKTDPKE
         KTDPKE
Subjt:  GKTDPKE

A0A5A7TYI0 Uncharacterized protein1.1e-1343.93Show/hide
Query:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY
        RLE + + +ER+PPP    + +++    + YE D  ++ +DDQVTL+  P    RR+G G  R RG G+ YQN QRR   E   ++RN+ +IK K+PKF+
Subjt:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY

Query:  GKTDPKE
        GKTDP+E
Subjt:  GKTDPKE

A0A5D3CHG3 Retrotrans_gag domain-containing protein6.7e-1445.79Show/hide
Query:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY
        R E + + +ER+PPP    +++++   ++  E D S++ +DDQVTL+G P    RR+G G  R RGRGR YQN QRRA  E +  + N+ +IK K+PKF+
Subjt:  RLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFY

Query:  GKTDPKE
         KTDPKE
Subjt:  GKTDPKE

A0A6J1DFN2 uncharacterized protein LOC1110200573.0e-1463.41Show/hide
Query:  EHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRA-RGRGRGYQ-NFQRRAPWEEAHVDRNLGSIKLKLPKFYGKTDPKE
        E++ E+  S++ EDDQVTL+   R G+RR G   HR  RGRGRG Q N+QRRAP EEA VDRNLGSIKLK+ KF+GKTDP+E
Subjt:  EHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRA-RGRGRGYQ-NFQRRAPWEEAHVDRNLGSIKLKLPKFYGKTDPKE

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241152.1e-2359.26Show/hide
Query:  MGRLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPK
        +GRLETQ Q + R+PPPP  RV+      E +YE D S+  EDDQ T++  PRGG+  +G G  R RGRGRGY NFQ RAP   A VDRNLG+IKLKL K
Subjt:  MGRLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPK

Query:  FYGKTDPK
        FYGKTDP+
Subjt:  FYGKTDPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGATTGGAGACTCAACGCCAAGTCCAAGAGAGGATACCACCTCCACCACCACAACGTGTTGTAGTTGATAACATTCCCTATGAGCACGATTATGAGGATGATGA
ATCTAATGAACATGAGGATGACCAAGTTACATTAGTTGGGGCTCCAAGAGGAGGAGAAAGGCGTCTTGGTCGTGGCTTTCATAGAGCGAGAGGTCGAGGAAGAGGATATC
AAAATTTCCAAAGGAGAGCTCCATGGGAAGAAGCTCACGTTGATCGTAACTTGGGGAGCATCAAATTGAAGCTTCCAAAGTTTTATGGAAAAACTGATCCAAAGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGATTGGAGACTCAACGCCAAGTCCAAGAGAGGATACCACCTCCACCACCACAACGTGTTGTAGTTGATAACATTCCCTATGAGCACGATTATGAGGATGATGA
ATCTAATGAACATGAGGATGACCAAGTTACATTAGTTGGGGCTCCAAGAGGAGGAGAAAGGCGTCTTGGTCGTGGCTTTCATAGAGCGAGAGGTCGAGGAAGAGGATATC
AAAATTTCCAAAGGAGAGCTCCATGGGAAGAAGCTCACGTTGATCGTAACTTGGGGAGCATCAAATTGAAGCTTCCAAAGTTTTATGGAAAAACTGATCCAAAGGAGTGA
Protein sequenceShow/hide protein sequence
MGRLETQRQVQERIPPPPPQRVVVDNIPYEHDYEDDESNEHEDDQVTLVGAPRGGERRLGRGFHRARGRGRGYQNFQRRAPWEEAHVDRNLGSIKLKLPKFYGKTDPKE