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Lag0021924 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021924
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPlant protein of unknown function (DUF247)
Genome locationchr7:13974474..13974821
RNA-Seq ExpressionLag0021924
SyntenyLag0021924
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131634.1 UPF0481 protein At3g47200-like [Momordica charantia]1.4e-2762.75Show/hide
Query:  IYRVPKRLLSLDCKAYRPEVISIGPFHH-GQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFIVEAL
        IYRVPKRLL+++ KAY P+VISIGPFHH  Q +L+ T+Q KL  L+SYLHR+ M+VE VV   +NWE++ARSCY E I MN+D FV MLL+DGCF+V  L
Subjt:  IYRVPKRLLSLDCKAYRPEVISIGPFHH-GQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFIVEAL

Query:  II
        I+
Subjt:  II
XP_022132118.1 UPF0481 protein At3g47200-like [Momordica charantia]5.0e-3058.62Show/hide
Query:  MLRQQSP-DFSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVK
        +L +Q P   ++WCIYRVPKRL  +   AY P+VI+IGPFHHG+ DL+ T+Q KL C  +YL RI   V+ VVA AR WE KAR  YAE INM SDDFV+
Subjt:  MLRQQSP-DFSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVK

Query:  MLLMDGCFIVEALIIV
        M+L+D CFIVE +II+
Subjt:  MLLMDGCFIVEALIIV
XP_022158989.1 UPF0481 protein At3g47200-like isoform X1 [Momordica charantia]8.0e-2855.75Show/hide
Query:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL
        Q+ P  ++ C I+RVP+RLL  + +AY P++ISIGPFHHG++DLM  EQ KL  L+ YL R N  +E  V   R+WE+ AR+CYAE INM+SD+FVKM+L
Subjt:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL

Query:  MDGCFIVEALIIV
        +DGCFIVE +++V
Subjt:  MDGCFIVEALIIV
XP_022158990.1 UPF0481 protein At3g47200-like isoform X2 [Momordica charantia]8.0e-2855.75Show/hide
Query:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL
        Q+ P  ++ C I+RVP+RLL  + +AY P++ISIGPFHHG++DLM  EQ KL  L+ YL R N  +E  V   R+WE+ AR+CYAE INM+SD+FVKM+L
Subjt:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL

Query:  MDGCFIVEALIIV
        +DGCFIVE +++V
Subjt:  MDGCFIVEALIIV
XP_022158992.1 UPF0481 protein At3g47200-like isoform X3 [Momordica charantia]8.0e-2855.75Show/hide
Query:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL
        Q+ P  ++ C I+RVP+RLL  + +AY P++ISIGPFHHG++DLM  EQ KL  L+ YL R N  +E  V   R+WE+ AR+CYAE INM+SD+FVKM+L
Subjt:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL

Query:  MDGCFIVEALIIV
        +DGCFIVE +++V
Subjt:  MDGCFIVEALIIV
TrEMBL top hitse value%identityAlignment
A0A6J1BQT6 UPF0481 protein At3g47200-like6.6e-2862.75Show/hide
Query:  IYRVPKRLLSLDCKAYRPEVISIGPFHH-GQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFIVEAL
        IYRVPKRLL+++ KAY P+VISIGPFHH  Q +L+ T+Q KL  L+SYLHR+ M+VE VV   +NWE++ARSCY E I MN+D FV MLL+DGCF+V  L
Subjt:  IYRVPKRLLSLDCKAYRPEVISIGPFHH-GQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFIVEAL

Query:  II
        I+
Subjt:  II
A0A6J1BVD4 UPF0481 protein At3g47200-like2.4e-3058.62Show/hide
Query:  MLRQQSP-DFSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVK
        +L +Q P   ++WCIYRVPKRL  +   AY P+VI+IGPFHHG+ DL+ T+Q KL C  +YL RI   V+ VVA AR WE KAR  YAE INM SDDFV+
Subjt:  MLRQQSP-DFSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVK

Query:  MLLMDGCFIVEALIIV
        M+L+D CFIVE +II+
Subjt:  MLLMDGCFIVEALIIV
A0A6J1DXD6 UPF0481 protein At3g47200-like isoform X23.9e-2855.75Show/hide
Query:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL
        Q+ P  ++ C I+RVP+RLL  + +AY P++ISIGPFHHG++DLM  EQ KL  L+ YL R N  +E  V   R+WE+ AR+CYAE INM+SD+FVKM+L
Subjt:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL

Query:  MDGCFIVEALIIV
        +DGCFIVE +++V
Subjt:  MDGCFIVEALIIV
A0A6J1DYL4 UPF0481 protein At3g47200-like isoform X33.9e-2855.75Show/hide
Query:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL
        Q+ P  ++ C I+RVP+RLL  + +AY P++ISIGPFHHG++DLM  EQ KL  L+ YL R N  +E  V   R+WE+ AR+CYAE INM+SD+FVKM+L
Subjt:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL

Query:  MDGCFIVEALIIV
        +DGCFIVE +++V
Subjt:  MDGCFIVEALIIV
A0A6J1E120 UPF0481 protein At3g47200-like isoform X13.9e-2855.75Show/hide
Query:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL
        Q+ P  ++ C I+RVP+RLL  + +AY P++ISIGPFHHG++DLM  EQ KL  L+ YL R N  +E  V   R+WE+ AR+CYAE INM+SD+FVKM+L
Subjt:  QQSPDFSKWC-IYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLL

Query:  MDGCFIVEALIIV
        +DGCFIVE +++V
Subjt:  MDGCFIVEALIIV
SwissProt top hitse value%identityAlignment
Q9SD53 UPF0481 protein At3g472007.6e-1337.74Show/hide
Query:  CIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMS--VEDVVAKA-RNWESKARSCYAEHINMNSDDFVKMLLMDGCFIV
        CI+RVP+  ++L+ KAY+P+V+SIGP+H+G+K L   +Q K   L  +L         E+V+ KA  + E K R  Y+E +     D + M+++DGCFI+
Subjt:  CIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMS--VEDVVAKA-RNWESKARSCYAEHINMNSDDFVKMLLMDGCFIV

Query:  EALIIV
           +I+
Subjt:  EALIIV
Arabidopsis top hitse value%identityAlignment
AT3G50120.1 Plant protein of unknown function (DUF247)1.0e-2040.2Show/hide
Query:  FSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFI
        + K CIYRVP  L   D K+Y P+ +S+GP+HHG+K L   ++ K   +N  L R N  ++  +   R  E KAR+CY   ++++S++F++ML++DGCF+
Subjt:  FSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFI

Query:  VE
        +E
Subjt:  VE
AT3G50160.1 Plant protein of unknown function (DUF247)2.7e-2144.9Show/hide
Query:  CIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFIVE
        CIYRVP  L   D K+Y P+++SIGP+HHG K LM  E+ K   +N  + R    +E  +   +  E KAR+CY   INMN ++F++ML++DG FI+E
Subjt:  CIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFIVE
AT3G50170.1 Plant protein of unknown function (DUF247)2.3e-2042.16Show/hide
Query:  FSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFI
        + K CIYRVP  L   D K+Y P+ +S+GP+HHG+K L   E+ K   LN  L R+   +E      R  E KAR+CY   I+++ ++F +ML++DGCF+
Subjt:  FSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFI

Query:  VE
        +E
Subjt:  VE
AT3G50170.2 Plant protein of unknown function (DUF247)2.3e-2042.16Show/hide
Query:  FSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFI
        + K CIYRVP  L   D K+Y P+ +S+GP+HHG+K L   E+ K   LN  L R+   +E      R  E KAR+CY   I+++ ++F +ML++DGCF+
Subjt:  FSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFI

Query:  VE
        +E
Subjt:  VE
AT4G31980.1 unknown protein4.0e-2548.08Show/hide
Query:  SKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFIV
        +K CIY+VP +L  L+  AY P ++S GP H G+++L   E  K   L S++ R N S+ED+V  AR WE  ARSCYAE + ++SD+FV+ML++DG F+V
Subjt:  SKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFIV

Query:  EALI
        E L+
Subjt:  EALI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCGACAACAATCTCCTGACTTTTCAAAATGGTGCATCTATCGAGTTCCCAAACGACTACTAAGCCTGGATTGTAAAGCTTATAGGCCAGAAGTCATTTCCATTGG
CCCTTTTCACCATGGTCAAAAGGATTTGATGGGCACAGAACAACTTAAACTCCTATGTCTCAATAGTTATCTACACCGTATAAATATGAGTGTTGAGGATGTGGTGGCGA
AGGCTCGAAATTGGGAGAGTAAAGCTCGTAGTTGCTATGCAGAACACATAAACATGAACAGTGACGATTTTGTGAAAATGTTGCTCATGGATGGCTGTTTCATAGTGGAG
GCTCTAATAATAGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCGACAACAATCTCCTGACTTTTCAAAATGGTGCATCTATCGAGTTCCCAAACGACTACTAAGCCTGGATTGTAAAGCTTATAGGCCAGAAGTCATTTCCATTGG
CCCTTTTCACCATGGTCAAAAGGATTTGATGGGCACAGAACAACTTAAACTCCTATGTCTCAATAGTTATCTACACCGTATAAATATGAGTGTTGAGGATGTGGTGGCGA
AGGCTCGAAATTGGGAGAGTAAAGCTCGTAGTTGCTATGCAGAACACATAAACATGAACAGTGACGATTTTGTGAAAATGTTGCTCATGGATGGCTGTTTCATAGTGGAG
GCTCTAATAATAGTATAA
Protein sequenceShow/hide protein sequence
MLRQQSPDFSKWCIYRVPKRLLSLDCKAYRPEVISIGPFHHGQKDLMGTEQLKLLCLNSYLHRINMSVEDVVAKARNWESKARSCYAEHINMNSDDFVKMLLMDGCFIVE
ALIIV