CuGenDBv2

Gene ID	Lag0021931
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Genome location	chr7:14129180..14131602
RNA-Seq Expression	Lag0021931
Synteny	Lag0021931
Gene Ontology terms	GO:0007018 - microtubule-based movement (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR015947 - PUA-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022980139.1 uncharacterized protein LOC111479615 [Cucurbita maxima]

2.9e-34

87.64

Show/hide

Query:  VKIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS
        ++IQPGALILFNKCLLFEVQDV +YPSFSAMLE E LDKVLPGVKTL DGVQIYR FYSEEKE SNGVLGIHVKKSVVQP  ILSRIIS
Subjt:  VKIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS

XP_023527933.1 uncharacterized protein LOC111791000 [Cucurbita pepo subsp. pepo]

3.9e-34

86.52

Show/hide

Query:  VKIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS
        ++IQPGALILFNKCLLFEVQDV +YPSFSAMLE E LDKVLPGVKTL DGVQIYR FYSEEKE SNGVLGIHVKKSVVQP  +LSRIIS
Subjt:  VKIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS

XP_038879095.1 uncharacterized protein LOC120071108 isoform X1 [Benincasa hispida]

1.7e-34

84.27

Show/hide

Query:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIISL
        +IQPGALILFNKCLLFEVQDV +YPSFSAML+ E LDKVLPG+KTLADG+QIYRKFYSEEKE+SNGVLGIHVKKSV QP+ +LSRIIS+
Subjt:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIISL

XP_038879102.1 uncharacterized protein LOC120071108 isoform X2 [Benincasa hispida]

1.7e-34

84.27

Show/hide

Query:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIISL
        +IQPGALILFNKCLLFEVQDV +YPSFSAML+ E LDKVLPG+KTLADG+QIYRKFYSEEKE+SNGVLGIHVKKSV QP+ +LSRIIS+
Subjt:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIISL

XP_038879108.1 uncharacterized protein LOC120071108 isoform X3 [Benincasa hispida]

1.7e-34

85.23

Show/hide

Query:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS
        +IQPGALILFNKCLLFEVQDV +YPSFSAML+ E LDKVLPG+KTLADG+QIYRKFYSEEKE+SNGVLGIHVKKSV QP+ +LSRIIS
Subjt:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS

TrEMBL top hits

e value

%identity

Alignment

A0A5D3E1K2 RNA-binding ASCH domain protein, putative isoform 1

4.6e-33

84.27

Show/hide

Query:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIISL
        +IQ GALILFNKCLLFEVQDV +YPSF AML+ E LD VLPGVKTL DGVQ+YRKFYSEEKELSNGVLGIHVKKSVVQP+ ILSRIIS+
Subjt:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIISL

A0A6J1CVK0 uncharacterized protein LOC111015172 isoform X8

1.3e-32

83.15

Show/hide

Query:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIISL
        ++QPG LILFNKCLL EVQDV +Y SFSAMLE EGLDKVLPGVKTL DGVQ+YRKFYSEEKELSNGVLGIHVKKSV QP  +LSRIIS+
Subjt:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIISL

A0A6J1CWC5 uncharacterized protein LOC111015172 isoform X7

7.8e-33

84.27

Show/hide

Query:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIISL
        ++QPG LILFNKCLL EVQDV +Y SFSAMLE EGLDKVLPGVKTL DGVQ+YRKFYSEEKELSNGVLGIHVKKSV QP  +LSRIISL
Subjt:  KIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIISL

A0A6J1GV12 uncharacterized protein LOC111457433

4.2e-34

86.52

Show/hide

Query:  VKIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS
        ++IQPGALILFNKCLLFEVQDV +YPSFSAMLE E LDKVLPGVKTL DGVQIYR FYSEEKE SNGVLGIHVKKS VQP  ILSRIIS
Subjt:  VKIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS

A0A6J1IYG9 uncharacterized protein LOC111479615

1.4e-34

87.64

Show/hide

Query:  VKIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS
        ++IQPGALILFNKCLLFEVQDV +YPSFSAMLE E LDKVLPGVKTL DGVQIYR FYSEEKE SNGVLGIHVKKSVVQP  ILSRIIS
Subjt:  VKIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G43465.1 RNA-binding ASCH domain protein

7.0e-18

45.24

Show/hide

Query:  GALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS
        G++++ NKCL+FEV ++ +Y SF  +L+ E  +KV PG KT+ +G+Q++RK Y  ++E  NGV+ IH+ KSV QP   L+ I+S
Subjt:  GALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS

AT3G03320.1 RNA-binding ASCH domain protein

1.1e-23

58.43

Show/hide

Query:  VKIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS
        ++I  G  +LFNKCLL EVQDV RY SFS ML+ EGL KVLPGV+++ +GVQ+YR FYSEEKE  NGV+ I V K   QP   L+ ++S
Subjt:  VKIQPGALILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIIS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGGAGCAAACAAGAGAGGAGCCTTCTACTCCAACAGCTTCACCAACGACTACAAGTTCTCAAGAAGATGAGAACTCAAGTGAAAGGATTCCACGTTTCAGAAGATT
ACAAGAACTCTATGAGGTAACTGAAAATCGTGATAATCTTGCTCTCTTTTGTCTTTTTGCCGACTGTGAGCCCATGAACTTCCAAGAAGCAGTGAAAAACAAAAATTGGA
AAAGCGCTATGGATGAGGAGATCAAGACGATCAAGAAAAAGGACACATGGGAGATAGTCTCACTTCCAAAAGGGCACAAGGCGATCAAAGTGAAAATTCAGCCTGGAGCC
TTGATACTTTTCAATAAATGTTTGTTGTTTGAGGTTCAGGATGTATGTCGATACCCTTCATTTTCTGCAATGTTGGAAACAGAGGGTCTTGATAAAGTTCTTCCTGGAGT
AAAAACCTTAGCTGATGGTGTCCAAATATACAGGAAGTTCTACTCTGAAGAGAAAGAACTGTCCAATGGCGTCCTTGGGATCCATGTCAAAAAATCTGTTGTCCAGCCAC
ACACTATTTTGTCAAGAATTATATCTTTAAAAGCATTTTACCGAACCTTACCAGCGGGAATCGTTGGGATTAAAGGGGCAACGAGATATATGGCTAAAATAAATAGGTGG
GATTTGAAAAATAGCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MMEQTREEPSTPTASPTTTSSQEDENSSERIPRFRRLQELYEVTENRDNLALFCLFADCEPMNFQEAVKNKNWKSAMDEEIKTIKKKDTWEIVSLPKGHKAIKVKIQPGA
LILFNKCLLFEVQDVCRYPSFSAMLETEGLDKVLPGVKTLADGVQIYRKFYSEEKELSNGVLGIHVKKSVVQPHTILSRIISLKAFYRTLPAGIVGIKGATRYMAKINRW
DLKNS

Lag0021931 (gene) of Sponge gourd (AG-4) v1 genome