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Lag0021934 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021934
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr7:14143267..14143782
RNA-Seq ExpressionLag0021934
SyntenyLag0021934
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.8e-2145.99Show/hide
Query:  SNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPN
        +   L   LET AV GA W +S     T + + L P A VW  F +S LLPTTH  T+SK+R+LL+ S+L   SI+VGR++ +EI ACA RK   LFFP+
Subjt:  SNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPN

Query:  LITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE
        LIT LC  A+     +EE L + G ID+ ++AR+ +E
Subjt:  LITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.8e-2145.26Show/hide
Query:  SNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPN
        + + L   LET A  GA W +S     T + + L P A VW+ F +S LLPTTH  T+SK+R+LL+ S+L   SI+VGR++ +EI ACA RK   LFFP+
Subjt:  SNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPN

Query:  LITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE
        LIT LC  A+     +EE L + G ID+ ++AR+ +E
Subjt:  LITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]5.7e-2244.78Show/hide
Query:  QLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPNLIT
        +L + LET A+ GA W +S   + T L + L P A +W+ F +S LLPTTH   +SKERVLL++S+L   SI++GR++  EI ACA RK   LFFP+LI 
Subjt:  QLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPNLIT

Query:  ALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE
         +C  A+     +EE L + G ID+ ++AR+ +E
Subjt:  ALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.7e-2145.32Show/hide
Query:  APSNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFF
        A +  +L   LET A+ GA W +S     T L + L P A VW+ F +S LLPTTH  T+SKERVLL++S+L   SI+VG+++  EI A A RK   LFF
Subjt:  APSNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFF

Query:  PNLITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE
        P+LIT +C  A+     +EE L + G ID+ ++AR+ +E
Subjt:  PNLITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.0e-1940.12Show/hide
Query:  QLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPNLIT
        +L   LET A  GA W +S     T + + L P A VW+ F +S LLPTTH   +SK+R+LL+ S+L   SI+VGR++ +EI ACA +K   LFFP+LIT
Subjt:  QLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPNLIT

Query:  ALCLKAQVQVDEDEEILMDMGIIDSASIARLLRESKGRTNTNIVFRSSGNLKAAKENDEAHG
         LC  A   V+E++  L + G ID+ ++AR+ +E      T    + S +  AA  +   +G
Subjt:  ALCLKAQVQVDEDEEILMDMGIIDSASIARLLRESKGRTNTNIVFRSSGNLKAAKENDEAHG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.3e-2145.99Show/hide
Query:  SNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPN
        +   L   LET AV GA W +S     T + + L P A VW  F +S LLPTTH  T+SK+R+LL+ S+L   SI+VGR++ +EI ACA RK   LFFP+
Subjt:  SNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPN

Query:  LITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE
        LIT LC  A+     +EE L + G ID+ ++AR+ +E
Subjt:  LITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.4e-2145.26Show/hide
Query:  SNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPN
        + + L   LET A  GA W +S     T + + L P A VW+ F +S LLPTTH  T+SK+R+LL+ S+L   SI+VGR++ +EI ACA RK   LFFP+
Subjt:  SNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPN

Query:  LITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE
        LIT LC  A+     +EE L + G ID+ ++AR+ +E
Subjt:  LITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE

A0A2P5BNT0 Uncharacterized protein (Fragment)2.8e-2244.78Show/hide
Query:  QLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPNLIT
        +L + LET A+ GA W +S   + T L + L P A +W+ F +S LLPTTH   +SKERVLL++S+L   SI++GR++  EI ACA RK   LFFP+LI 
Subjt:  QLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPNLIT

Query:  ALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE
         +C  A+     +EE L + G ID+ ++AR+ +E
Subjt:  ALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE

A0A2P5CPE8 Uncharacterized protein8.1e-2245.32Show/hide
Query:  APSNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFF
        A +  +L   LET A+ GA W +S     T L + L P A VW+ F +S LLPTTH  T+SKERVLL++S+L   SI+VG+++  EI A A RK   LFF
Subjt:  APSNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFF

Query:  PNLITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE
        P+LIT +C  A+     +EE L + G ID+ ++AR+ +E
Subjt:  PNLITALCLKAQVQVDEDEEILMDMGIIDSASIARLLRE

A0A2P5DXM3 Uncharacterized protein9.9e-2040.12Show/hide
Query:  QLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPNLIT
        +L   LET A  GA W +S     T + + L P A VW+ F +S LLPTTH   +SK+R+LL+ S+L   SI+VGR++ +EI ACA +K   LFFP+LIT
Subjt:  QLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPNLIT

Query:  ALCLKAQVQVDEDEEILMDMGIIDSASIARLLRESKGRTNTNIVFRSSGNLKAAKENDEAHG
         LC  A   V+E++  L + G ID+ ++AR+ +E      T    + S +  AA  +   +G
Subjt:  ALCLKAQVQVDEDEEILMDMGIIDSASIARLLRESKGRTNTNIVFRSSGNLKAAKENDEAHG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGCTCCATCTAATGAGCAACTCCAATTAGCTCTAGAAACATGTGCAGTAGAAGGGGCAAGCTGGAAAATGTCCAGGAACTCAATCCGAACACTGTTGGCAGC
TTACCTAAAGCCAGAAGCAAATGTATGGCATACTTTTGCAAGGAGTATGTTGCTCCCTACCACTCATGACACCACTATGTCCAAGGAAAGAGTTCTTTTGGTATTCTCCA
TCTTGAAGATTTTGAGCATTGATGTGGGGAGGTTGTTGGCAAATGAGATTTTGGCTTGTGCAAAAAGGAAGATAGAAAGGCTATTTTTCCCAAATCTTATTACTGCATTA
TGTCTGAAGGCTCAAGTGCAAGTGGATGAAGATGAGGAGATCTTAATGGACATGGGTATAATTGATTCAGCATCAATAGCAAGGCTGCTTAGGGAGAGCAAAGGGAGAAC
CAACACTAATATTGTATTTAGGAGTTCGGGAAATCTTAAAGCAGCAAAGGAGAATGATGAGGCACATGGAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTGCTCCATCTAATGAGCAACTCCAATTAGCTCTAGAAACATGTGCAGTAGAAGGGGCAAGCTGGAAAATGTCCAGGAACTCAATCCGAACACTGTTGGCAGC
TTACCTAAAGCCAGAAGCAAATGTATGGCATACTTTTGCAAGGAGTATGTTGCTCCCTACCACTCATGACACCACTATGTCCAAGGAAAGAGTTCTTTTGGTATTCTCCA
TCTTGAAGATTTTGAGCATTGATGTGGGGAGGTTGTTGGCAAATGAGATTTTGGCTTGTGCAAAAAGGAAGATAGAAAGGCTATTTTTCCCAAATCTTATTACTGCATTA
TGTCTGAAGGCTCAAGTGCAAGTGGATGAAGATGAGGAGATCTTAATGGACATGGGTATAATTGATTCAGCATCAATAGCAAGGCTGCTTAGGGAGAGCAAAGGGAGAAC
CAACACTAATATTGTATTTAGGAGTTCGGGAAATCTTAAAGCAGCAAAGGAGAATGATGAGGCACATGGAGCATAG
Protein sequenceShow/hide protein sequence
MEIAPSNEQLQLALETCAVEGASWKMSRNSIRTLLAAYLKPEANVWHTFARSMLLPTTHDTTMSKERVLLVFSILKILSIDVGRLLANEILACAKRKIERLFFPNLITAL
CLKAQVQVDEDEEILMDMGIIDSASIARLLRESKGRTNTNIVFRSSGNLKAAKENDEAHGA