CuGenDBv2

Gene ID	Lag0021938
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	calumenin-B
Genome location	chr7:14223670..14236239
RNA-Seq Expression	Lag0021938
Synteny	Lag0021938
Gene Ontology terms	GO:0098869 - cellular oxidant detoxification (biological process) GO:0005783 - endoplasmic reticulum (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004601 - peroxidase activity (molecular function) GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR018247 - EF-Hand 1, calcium-binding site

Homology

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GenBank top hits

e value

%identity

Alignment

KJB31882.1 hypothetical protein B456_005G213000 [Gossypium raimondii]

5.4e-19

76.27

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Query:  PQIWHRLGNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLC
        P  W +  N SFGYD+GWW EEHFNASDANGDG+L+ITEFNDFLHP++SKSPKLL WLC
Subjt:  PQIWHRLGNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLC

MBA0766204.1 hypothetical protein [Gossypium trilobum]

5.4e-19

76.27

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Query:  PQIWHRLGNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLC
        P  W +  N SFGYD+GWW EEHFNASDANGDG+L+ITEFNDFLHP++SKSPKLL WLC
Subjt:  PQIWHRLGNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLC

XP_008445899.1 PREDICTED: calumenin-B [Cucumis melo]

5.7e-21

60.42

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Query:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV-----TDLVGELQIVD----LLQWIKKLPLENISSNDERKE
        GN SFGYD+GWWNEEHFNASDA+GDGVLD+ EFNDFLHPA+SKSPKLLLWLCA V      D  G+L   +    +L  I+++  +  SSN E +E
Subjt:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV-----TDLVGELQIVD----LLQWIKKLPLENISSNDERKE

XP_011655504.1 calumenin-B [Cucumis sativus]

1.7e-20

59.38

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Query:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV-----TDLVGELQIVD----LLQWIKKLPLENISSNDERKE
        GNGSFGYD+GWWNEEHFNASDA+GDGVLD+ EFNDFLHPA+SKS KLLLWLCA V      D  G+L   +    +L  ++++  +  SSN E +E
Subjt:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV-----TDLVGELQIVD----LLQWIKKLPLENISSNDERKE

XP_038892509.1 calumenin-B-like [Benincasa hispida]

1.7e-20

89.09

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Query:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV
        GN SFGYD+GWWNEEHFNASDA+GDGVLDI EFNDFLHPA+SKSPKLLLWLCA V
Subjt:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KT37 Uncharacterized protein

8.1e-21

59.38

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Query:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV-----TDLVGELQIVD----LLQWIKKLPLENISSNDERKE
        GNGSFGYD+GWWNEEHFNASDA+GDGVLD+ EFNDFLHPA+SKS KLLLWLCA V      D  G+L   +    +L  ++++  +  SSN E +E
Subjt:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV-----TDLVGELQIVD----LLQWIKKLPLENISSNDERKE

A0A1S3BDS4 calumenin-B

2.8e-21

60.42

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Query:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV-----TDLVGELQIVD----LLQWIKKLPLENISSNDERKE
        GN SFGYD+GWWNEEHFNASDA+GDGVLD+ EFNDFLHPA+SKSPKLLLWLCA V      D  G+L   +    +L  I+++  +  SSN E +E
Subjt:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV-----TDLVGELQIVD----LLQWIKKLPLENISSNDERKE

A0A5A7SY06 Calumenin-B

2.8e-21

60.42

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Query:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV-----TDLVGELQIVD----LLQWIKKLPLENISSNDERKE
        GN SFGYD+GWWNEEHFNASDA+GDGVLD+ EFNDFLHPA+SKSPKLLLWLCA V      D  G+L   +    +L  I+++  +  SSN E +E
Subjt:  GNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYV-----TDLVGELQIVD----LLQWIKKLPLENISSNDERKE

A0A5D2DIY5 Uncharacterized protein

2.6e-19

76.27

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Query:  PQIWHRLGNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLC
        P  W +  N SFGYD+GWW EEHFNASDANGDG+L+ITEFNDFLHP++SKSPKLL WLC
Subjt:  PQIWHRLGNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLC

A0A5D2W117 Uncharacterized protein

2.6e-19

76.27

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Query:  PQIWHRLGNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLC
        P  W +  N SFGYD+GWW EEHFNASDANGDG+L+ITEFNDFLHP++SKSPKLL WLC
Subjt:  PQIWHRLGNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G27790.1 Calcium-binding EF hand family protein

1.8e-04

45.45

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Query:  DLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWL
        + GWW E+ F  SD + +G LDI EFN+FLHP +S++     W+
Subjt:  DLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWL

AT5G08580.1 Calcium-binding EF hand family protein

1.9e-22

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Query:  PQIWHRLG-NGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLC
        P  W R   N SFGYD+GWW EEHFNASDANGDG+L++TEFNDFLHPA++K+PKLLLWLC
Subjt:  PQIWHRLG-NGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLC

Sequences

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CDS sequence

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ATGGTTCGTCCCTCGTCACTGGTCGTGAAGGGTAGTAGGTCGTGGCCACAAATTTGGCATCGATTGGGTAATGGTTCTTTCGGCTATGATCTTGGCTGGTGGAATGAGGA
GCACTTCAATGCATCAGATGCAAATGGGGATGGGGTTTTGGACATAACTGAATTCAATGACTTCTTGCATCCTGCTAACAGCAAGAGTCCAAAGCTACTACTCTGGCTGT
GTGCATATGTGACTGATCTTGTTGGTGAGCTTCAAATTGTTGATCTACTACAATGGATAAAGAAACTCCCATTGGAAAATATTTCTTCAAATGATGAGAGGAAGGAAGGT
ACGCGAAACTTCTCAAAAGCAAAGGTTGCTCAGCTAACGACTCACATGATACATGATCTTGTCCTTTCTTTGCCTCAACATCGCTCCTACTACTACATCATTGGCGTTGC
ACATCACCTCAAATGGATACCCATTAATGTTAGCTCTCAATTTCAAGGTACCCATAATATTTGGAGGTTTAATCGTCAATTAGGAGTGAATTTGTTACCCGGGCAGCAAG
TCGAAGGTTCTGTTTTGTTGTTTAAAACCTTGGAGTTAAGGGAATTTGTTGAAGGTTTATCAAGTGTTTATTTGGCTAAGGTGTCTACAATTTTTGAGATAGTTGTAGTT
ACGTCGTTATGCTGTCGAATTTTGATGCGCGATTTTGCTTACCACAAGTGTACGGGTCAAAGCCCAGTTTCAGGCACGTTATCGTGGGCTCTCTCAATTCAAGACAGTGT
TGAGCTTATGATCAAACACGTTATTCGTGTGCCAGATGGGCACCTAGGCATGTTGTCATGCGTCAGTTGCTCCACCGTATTTCATGATCATGTTTCAGAGGTGGTACTCG
ATGACATCAGACGTGGCGAGGGCAGTGACTTGACTAGGCTATGGGATGCAGCTGCAAATCATGTCTCTAGAAGTCTAGGACCGGATCTAGGCTCCTTTGATGGGTTTTCA
GATCCGACCGGAAACTACGTGTGTGGGTCTTCTAGTCAGGAGTCGTGCGTCTTGTGTGTTGCAGTCGAAAACAAGGAAGAGAGGGAGAGAGGGATGCAATCGGCTTTGCT
CACCAAGACGCAGTCCCTCGGATCTCACGAAGACATAGCCGAAAAACACAGTCCCTCAGATCTCGCGAAGATGCAGCTGAAAACGCAGTCCCTCAAATCTTGCGAAGACA
CAACCGAAAACCAGTCCCTCAGATCTCGCCAAGATTCGCTTGTCGTCGTTTGCGAAGATCCACTCGTCGCTCGCGAATATCCTCTCAACTCTTCGTTCAATCGCAACCCA
GCTCAGAGGCGCCGTCGTTCAGATCTTCGTTAG

mRNA sequence

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Protein sequence

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MVRPSSLVVKGSRSWPQIWHRLGNGSFGYDLGWWNEEHFNASDANGDGVLDITEFNDFLHPANSKSPKLLLWLCAYVTDLVGELQIVDLLQWIKKLPLENISSNDERKEG
TRNFSKAKVAQLTTHMIHDLVLSLPQHRSYYYIIGVAHHLKWIPINVSSQFQGTHNIWRFNRQLGVNLLPGQQVEGSVLLFKTLELREFVEGLSSVYLAKVSTIFEIVVV
TSLCCRILMRDFAYHKCTGQSPVSGTLSWALSIQDSVELMIKHVIRVPDGHLGMLSCVSCSTVFHDHVSEVVLDDIRRGEGSDLTRLWDAAANHVSRSLGPDLGSFDGFS
DPTGNYVCGSSSQESCVLCVAVENKEERERGMQSALLTKTQSLGSHEDIAEKHSPSDLAKMQLKTQSLKSCEDTTENQSLRSRQDSLVVVCEDPLVAREYPLNSSFNRNP
AQRRRRSDLR

Lag0021938 (gene) of Sponge gourd (AG-4) v1 genome