| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN78706.1 hypothetical protein VITISV_028658 [Vitis vinifera] | 8.3e-47 | 26.3 | Show/hide |
Query: SRIQNPVSTPISSFPYDLATPPYLSDTTSKIED--YPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSM
+R NP +T S +A P T ++ED + + ++G+GL F+ Q+PPK + G +PNP++ + RQD+L+ SW L S+
Subjt: SRIQNPVSTPISSFPYDLATPPYLSDTTSKIED--YPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSM
Query: SNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVNLYQQLNN
+ L +V+ C +A ++W ++ F+S++ A+V+ K+++ KK L+++DY K+KN D LA AG KIS DH+L I++GLG EY+S + +
Subjt: SNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVNLYQQLNN
Query: NNHQFKKARGETMEVKGIRITMESETTSEIGITMGNHNANFVVVLDTLQSAVTSDLSG----GIKNQASAS----------TPHGFFPPHQPP-------
KK+ V I E + I+ + + N+ S+ + + +G G +N+ HG P + P
Subjt: NNHQFKKARGETMEVKGIRITMESETTSEIGITMGNHNANFVVVLDTLQSAVTSDLSG----GIKNQASAS----------TPHGFFPPHQPP-------
Query: ----------------YTTYSLRHDLNKENQ--------------WYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWPNLLEGK
T Y + D + +PDSGA+NHVT DL NLN G +Y G++K+H GNG ++ HIGL +P+
Subjt: ----------------YTTYSLRHDLNKENQ--------------WYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWPNLLEGK
Query: VAYELYQF----SLEK---ATSQHSTGGCPSSKFHSQIESWDIQTTSTIDKYAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLPLIKRSLYA
L +++K + SQ + +FH ++ + ++ EP +EA+ W +AM E+ ALM+N WS ++LP K +
Subjt: VAYELYQF----SLEK---ATSQHSTGGCPSSKFHSQIESWDIQTTSTIDKYAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLPLIKRSLYA
Query: NGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNLPGRTW
+ + P + R+ +A + +R +D+NN FL+G L EEV+M PPG + + L+ + +Y ++ P R W
Subjt: NGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNLPGRTW
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| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.7e-44 | 33.33 | Show/hide |
Query: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSK---IPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTK
+ T+L+ + L +F++ +++ P K++ S + S+ PNP Y+ W RQD LISSW LGSMS EIL+++L C++AK+IW L FSSR LAQ ++ K K
Subjt: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSK---IPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTK
Query: LETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVNLYQQLNNNNHQFKKARGETMEVKGIRITMESETTSEIGITMGNHNA
L KKGS+ LK+YF+KI VD+LA+ K +S DDH+L+IL GLGS+Y S +++ ++ EV + +T ES+ S++ +
Subjt: LETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVNLYQQLNNNNHQFKKARGETMEVKGIRITMESETTSEIGITMGNHNA
Query: NFVVVLDTLQSAVTS---------------DLSGGIKNQAS--------------------------------ASTPHGFFP-PHQPPYTTYS-------
N +V T + S + GG N S S G+ P H YT +
Subjt: NFVVVLDTLQSAVTS---------------DLSGGIKNQAS--------------------------------ASTPHGFFP-PHQPPYTTYS-------
Query: --LRHDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNW
DLN ++ WYPDSGA+NH+T LSNL++G++Y G N+++ NG+ L + H G +++
Subjt: --LRHDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNW
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| RVW13474.1 Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera] | 4.4e-48 | 25.96 | Show/hide |
Query: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLET
+ ++G+GL F+ +PPK + G +PNP++ + RQD+L+ SW + S+ + L +V+ C + ++W ++ F+S++ A+V+ K++++
Subjt: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLET
Query: TKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDS-------------------------------------TVNLYQQLNN-----
KK L+++DY K+KN D LA AG KIS DH+L I++GLG EY+S +VN Q +N
Subjt: TKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDS-------------------------------------TVNLYQQLNN-----
Query: -------------NNHQF------------KKARGETMEVKGIRITMESETTSEIGITMG----NHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHG
N +QF + RG GI+ + + ++ G T+ ++ NF + L G KN AS S
Subjt: -------------NNHQF------------KKARGETMEVKGIRITMESETTSEIGITMG----NHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHG
Query: FFPPHQPPYTTYSLRHDLNKENQ--------------WYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWPNLL---EGKVAYEL
T Y + D + W+PDSGA+NHVT DL NLN GT+Y G++K+H GNG L++ HIGL P+ +G + L
Subjt: FFPPHQPPYTTYSLRHDLNKENQ--------------WYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWPNLL---EGKVAYEL
Query: YQFSLEK--------------------------------ATSQHSTGGCPSSKFHS----------------QIESWDIQTTS-----------------
YQF L K A S H P S S ES I ++S
Subjt: YQFSLEK--------------------------------ATSQHSTGGCPSSKFHS----------------QIESWDIQTTS-----------------
Query: --------------------------------TIDKYAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLP-----------------------
T+D E EP ++E + W +AM E+ ALM+N WS + LP
Subjt: --------------------------------TIDKYAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLP-----------------------
Query: LIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNL
K L A G S+ G D SPVVKPTTIRV+ +A++ W +R +D+NN FL+G L EEV+M PPG + + L+ + +Y ++
Subjt: LIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNL
Query: PGRTW
P R W
Subjt: PGRTW
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| XP_022156747.1 uncharacterized protein LOC111023586 [Momordica charantia] | 1.8e-57 | 42.02 | Show/hide |
Query: DYPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKI---PNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLA
D P + V T+++GHGL +ID D + P +FIQ+GD +S PNPEY WI+QD LIS W LGSMS EILS++LDC K+IWT+L F+SRNLA
Subjt: DYPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKI---PNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLA
Query: QVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVNLYQQLNNNNHQFKKARGETMEVKGIRITMESETTSEIG
+V++LK+KLE KKGS++LK+YF+KIKNLVDSLA AGK++ DDH++HIL LG E+DS V++ + + + S G
Subjt: QVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVNLYQQLNNNNHQFKKARGETMEVKGIRITMESETTSEIG
Query: ITMGNHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHGFFPPHQPPYTTYSLRHDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGAS
+ G +QS+ +G + A + G F P + +D N++ WYPDSGA+NHVT+D N ++G+ Y G+ K+ GNG +
Subjt: ITMGNHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHGFFPPHQPPYTTYSLRHDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGAS
Query: LDVLHIG
L + HIG
Subjt: LDVLHIG
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| XP_022156747.1 uncharacterized protein LOC111023586 [Momordica charantia] | 3.3e-03 | 55.56 | Show/hide |
Query: YAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLPLIKR
Y EIEPPLVK AL+ +WV AM EY+AL+RN WS + P K+
Subjt: YAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLPLIKR
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| XP_022156747.1 uncharacterized protein LOC111023586 [Momordica charantia] | 8.9e-49 | 33.77 | Show/hide |
Query: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKI---PNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTK
+RT+L+G+GL +ID + P +F+Q+ +D SS NP Y WI+QD LIS+W LGSM+ +ILS++LDC++A++IWTVL F+SR LA+V++LK K
Subjt: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKI---PNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTK
Query: LETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVN-----------------LYQQLNNNNHQFKKARGETMEVKGIRITM
LE KKG+LSLKDYF+KIKNLVDSLA AGKK+S +DH++HIL GLG E+D+ ++ L QQ N + G V
Subjt: LETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVN-----------------LYQQLNNNNHQFKKARGETMEVKGIRITM
Query: ESETTSEIGITMGNHNANFVVVLDTLQSAVTSDLSGGIKN-----------------------------------QASASTPHGF---FPPHQPPYTTYS
+ H +N+ + + T++ S +N + +P GF FP + P + +S
Subjt: ESETTSEIGITMGNHNANFVVVLDTLQSAVTSDLSGGIKN-----------------------------------QASASTPHGF---FPPHQPPYTTYS
Query: -----------------------LRHDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWP
+ D N+++ WY DSG +NHVT++ N ++G++Y GD K+ GNG G NWP
Subjt: -----------------------LRHDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9FW32 Uncharacterized protein | 1.3e-45 | 27.61 | Show/hide |
Query: LKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKG
L+G L F+D P ++ P PNP ++ W+ QD +I S + S+S +L+ V+ C T++D+W L F++ + A+ + ++ +L T KKG
Subjt: LKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKG
Query: SLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTV-------------NLYQQLNNNNHQFKKARGET-MEVKGIRITMESETTSEIGI
S+ DYF LVD+LAA + +++++ + +L GLGSEY+S + LY L + + +A+ + + + G T ++S
Subjt: SLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTV-------------NLYQQLNNNNHQFKKARGET-MEVKGIRITMESETTSEIGI
Query: TMGNHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHGFFPPHQ-------PPYTTY-----SLRHDLNK-----------ENQWYPDSGASNHVTSDL
G+ N F +S+ + + G +N+ S+ +G P Q T Y S D NK ++QWY DSGA++H+T+DL
Subjt: TMGNHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHGFFPPHQ-------PPYTTY-----SLRHDLNK-----------ENQWYPDSGASNHVTSDL
Query: SNLNMGTD-YTGDNKVHEGNGASL--------DVLHIGLLNWPNL---LEGKVAYE------------------------LYQFSLEKATSQHSTGGC--
+NLN+ D Y G + +H GN S+ ++N P + LE A + L + +A+SQ
Subjt: SNLNMGTD-YTGDNKVHEGNGASL--------DVLHIGLLNWPNL---LEGKVAYE------------------------LYQFSLEKATSQHSTGGC--
Query: --PSSKFH------SQIESWDIQTTSTI-------------DKYAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWS--------------WL-----
P+S H +QI I T TI + EP A+KS W +AM E++AL+RN W+ W+
Subjt: --PSSKFH------SQIESWDIQTTSTI-------------DKYAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWS--------------WL-----
Query: ----NLPLIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSF
+ K L A G + G D SPV+KPTT+R + ++A++ GW LR +DI N FLHG L+EEVFMS PPG P+ V L
Subjt: ----NLPLIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSF
Query: VYFIRNLPGRTW
+Y ++ P R W
Subjt: VYFIRNLPGRTW
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| A0A2N9HLF0 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.6e-48 | 28.04 | Show/hide |
Query: SRIQNPVSTPISSFPYDLATPPYLSDTTSKI----EDYPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLG
S + +T +S + TP S T +I ++Y T + + G+ + H ID PPK I S PS IPNP Y TW D L+ S +
Subjt: SRIQNPVSTPISSFPYDLATPPYLSDTTSKI----EDYPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLG
Query: SMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTV------
++S ++S ++ ++ ++W L FSS++ A+V++ + L T KK + ++ +YF K K D LA+ G+ +S +D V ++L GL S+YDS +
Subjt: SMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTV------
Query: -------NLYQQLNNNNHQFKKARGETMEVKGIRITMESETTSEIGITMGNHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHG--------FFPPHQ
+LY L H+ + + T+ G+ T T NF + +G N S+S + H
Subjt: -------NLYQQLNNNNHQFKKARGETMEVKGIRITMESETTSEIGITMGNHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHG--------FFPPHQ
Query: PPYTTYSLRHDLNKENQ------------------WYPDSGASNHVTSDLSNLNMGTD-YTGDNKVHEGNGASLDVL------HIGLLNWPNLLEGKVAY
P T R + N + Q WYPD+GA+NH+TSDLSNLN+ + Y G ++VH GNG + L H+ L + P +
Subjt: PPYTTYSLRHDLNKENQ------------------WYPDSGASNHVTSDLSNLNMGTD-YTGDNKVHEGNGASLDVL------HIGLLNWPNLLEGKVAY
Query: ELYQFSLEKATSQHS--TGGCPSSKFHSQI-----------ESWDIQTTS--TIDKYAEIEPPLVK----------------------EALKSSHWVDAM
+ + +T S + PS + + + +QT S I K ++ P ++K EA KS+ W AM
Subjt: ELYQFSLEKATSQHS--TGGCPSSKFHSQI-----------ESWDIQTTS--TIDKYAEIEPPLVK----------------------EALKSSHWVDAM
Query: RTEYEALMRNDIWSWLNLPLIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPH
TE+ AL++N W+ L P K L A G + +G +D SPV+KP TIR + ++A A W +R +D+ N FLHG L+E+V+M+ PPG + S P+
Subjt: RTEYEALMRNDIWSWLNLPLIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPH
Query: MVSHLLLWISSFVYFIRNLPGRTW
V HL +Y ++ P R W
Subjt: MVSHLLLWISSFVYFIRNLPGRTW
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| A0A6J1DSS1 uncharacterized protein LOC111023586 | 8.7e-58 | 42.02 | Show/hide |
Query: DYPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKI---PNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLA
D P + V T+++GHGL +ID D + P +FIQ+GD +S PNPEY WI+QD LIS W LGSMS EILS++LDC K+IWT+L F+SRNLA
Subjt: DYPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKI---PNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLA
Query: QVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVNLYQQLNNNNHQFKKARGETMEVKGIRITMESETTSEIG
+V++LK+KLE KKGS++LK+YF+KIKNLVDSLA AGK++ DDH++HIL LG E+DS V++ + + + S G
Subjt: QVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVNLYQQLNNNNHQFKKARGETMEVKGIRITMESETTSEIG
Query: ITMGNHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHGFFPPHQPPYTTYSLRHDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGAS
+ G +QS+ +G + A + G F P + +D N++ WYPDSGA+NHVT+D N ++G+ Y G+ K+ GNG +
Subjt: ITMGNHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHGFFPPHQPPYTTYSLRHDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGAS
Query: LDVLHIG
L + HIG
Subjt: LDVLHIG
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| A0A6J1DSS1 uncharacterized protein LOC111023586 | 1.6e-03 | 55.56 | Show/hide |
Query: YAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLPLIKR
Y EIEPPLVK AL+ +WV AM EY+AL+RN WS + P K+
Subjt: YAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLPLIKR
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| A0A6J1DSS1 uncharacterized protein LOC111023586 | 4.3e-49 | 33.77 | Show/hide |
Query: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKI---PNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTK
+RT+L+G+GL +ID + P +F+Q+ +D SS NP Y WI+QD LIS+W LGSM+ +ILS++LDC++A++IWTVL F+SR LA+V++LK K
Subjt: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKI---PNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTK
Query: LETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVN-----------------LYQQLNNNNHQFKKARGETMEVKGIRITM
LE KKG+LSLKDYF+KIKNLVDSLA AGKK+S +DH++HIL GLG E+D+ ++ L QQ N + G V
Subjt: LETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVN-----------------LYQQLNNNNHQFKKARGETMEVKGIRITM
Query: ESETTSEIGITMGNHNANFVVVLDTLQSAVTSDLSGGIKN-----------------------------------QASASTPHGF---FPPHQPPYTTYS
+ H +N+ + + T++ S +N + +P GF FP + P + +S
Subjt: ESETTSEIGITMGNHNANFVVVLDTLQSAVTSDLSGGIKN-----------------------------------QASASTPHGF---FPPHQPPYTTYS
Query: -----------------------LRHDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWP
+ D N+++ WY DSG +NHVT++ N ++G++Y GD K+ GNG G NWP
Subjt: -----------------------LRHDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWP
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| A5B6L3 Uncharacterized protein | 4.0e-47 | 26.3 | Show/hide |
Query: SRIQNPVSTPISSFPYDLATPPYLSDTTSKIED--YPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSM
+R NP +T S +A P T ++ED + + ++G+GL F+ Q+PPK + G +PNP++ + RQD+L+ SW L S+
Subjt: SRIQNPVSTPISSFPYDLATPPYLSDTTSKIED--YPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSM
Query: SNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVNLYQQLNN
+ L +V+ C +A ++W ++ F+S++ A+V+ K+++ KK L+++DY K+KN D LA AG KIS DH+L I++GLG EY+S + +
Subjt: SNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVNLYQQLNN
Query: NNHQFKKARGETMEVKGIRITMESETTSEIGITMGNHNANFVVVLDTLQSAVTSDLSG----GIKNQASAS----------TPHGFFPPHQPP-------
KK+ V I E + I+ + + N+ S+ + + +G G +N+ HG P + P
Subjt: NNHQFKKARGETMEVKGIRITMESETTSEIGITMGNHNANFVVVLDTLQSAVTSDLSG----GIKNQASAS----------TPHGFFPPHQPP-------
Query: ----------------YTTYSLRHDLNKENQ--------------WYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWPNLLEGK
T Y + D + +PDSGA+NHVT DL NLN G +Y G++K+H GNG ++ HIGL +P+
Subjt: ----------------YTTYSLRHDLNKENQ--------------WYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWPNLLEGK
Query: VAYELYQF----SLEK---ATSQHSTGGCPSSKFHSQIESWDIQTTSTIDKYAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLPLIKRSLYA
L +++K + SQ + +FH ++ + ++ EP +EA+ W +AM E+ ALM+N WS ++LP K +
Subjt: VAYELYQF----SLEK---ATSQHSTGGCPSSKFHSQIESWDIQTTSTIDKYAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLPLIKRSLYA
Query: NGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNLPGRTW
+ + P + R+ +A + +R +D+NN FL+G L EEV+M PPG + + L+ + +Y ++ P R W
Subjt: NGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNLPGRTW
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.5e-06 | 25.84 | Show/hide |
Query: IPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGS-LSLKDYFMKIKNLVDSLAAAGKKISQDD
+PN ++W + + S + +S+ L+ TA+ I L+A + ++LA L L+ +L + K S +SL +F L+ L AAG KI + D
Subjt: IPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGS-LSLKDYFMKIKNLVDSLAAAGKKISQDD
Query: HVLHILKGLGSEYDSTVNLYQQLNNNNHQFKKARGETMEVKGIRITMESETTSEIGITMGNHNANFVVVLDTLQSAVT
+ H+L L S YD + + L+ N + ++ + I+I + TS+ + HN N + ++ VT
Subjt: HVLHILKGLGSEYDSTVNLYQQLNNNNHQFKKARGETMEVKGIRITMESETTSEIGITMGNHNANFVVVLDTLQSAVT
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.9e-09 | 27.27 | Show/hide |
Query: QIESWDIQTTSTIDKYAEIEPPLVKEAL---KSSHWVDAMRTEYEALMRNDIWSWLNLPLIKR-----------------------SLYANGSSRSRGTP
++ES +T + + EP +KE L + + + AM+ E E+L +N + + LP KR L G + +G
Subjt: QIESWDIQTTSTIDKYAEIEPPLVKEAL---KSSHWVDAMRTEYEALMRNDIWSWLNLPLIKR-----------------------SLYANGSSRSRGTP
Query: MDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNLPGRTW
D + SPVVK T+IR + ++A + + +D+ FLHG L EE++M P G K HMV L + +Y ++ P R W
Subjt: MDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNLPGRTW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-20 | 25 | Show/hide |
Query: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLET
V G+ L F+D +PP I G D + ++ NP+Y W RQD LI S LG++S + V TA IW L +++ + V +L+T+L+
Subjt: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLET
Query: TKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVN-------------LYQQLNNNNHQFKKARGETMEVKGIRITMESETTSE
KG+ ++ DY + D LA GK + D+ V +L+ L EY ++ ++++L N+ + T+ TT+
Subjt: TKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDSTVN-------------LYQQLNNNNHQFKKARGETMEVKGIRITMESETTSE
Query: IGITMGNHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPH------------------------GFFPPHQP--PYTTYSLRHDL-----NKENQWYPD
GN N + + S S + S P+ QP P+T + R +L N W D
Subjt: IGITMGNHNANFVVVLDTLQSAVTSDLSGGIKNQASASTPH------------------------GFFPPHQP--PYTTYSLRHDL-----NKENQWYPD
Query: SGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIG
SGA++H+TSD +NL++ YTG + V +G+++ + H G
Subjt: SGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.0e-16 | 31.95 | Show/hide |
Query: AEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWS---------------WL---------NLPLIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRV
AE EP +ALK W +AM +E A + N W W+ +L K L A G ++ G +D SPV+K T+IR+
Subjt: AEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWS---------------WL---------NLPLIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRV
Query: LFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNLPGRTW
+ +A+ WP+R +D+NN FL G L ++V+MS PPG +D+ +P+ V L +Y ++ P R W
Subjt: LFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNLPGRTW
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.9e-15 | 24.92 | Show/hide |
Query: TSDLSGGIKNQASASTPHGFFPPHQPPYTTYSLRHD--LNKENQWYPDSGASNHVT----SDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWPNLL
+S +S ++ +A + +G P QP T S + LN N P + N + S +S+ ++ T T ++ + + +S P L
Subjt: TSDLSGGIKNQASASTPHGFFPPHQPPYTTYSLRHD--LNKENQWYPDSGASNHVT----SDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWPNLL
Query: EGKVAYELYQFSLEKATSQHSTGGCPSSKFHSQIESWDIQTTSTIDKYAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWS---------------WL
A + Q + + + HS + + T+ A EP +A+K W AM +E A + N W W+
Subjt: EGKVAYELYQFSLEKATSQHSTGGCPSSKFHSQIESWDIQTTSTIDKYAEIEPPLVKEALKSSHWVDAMRTEYEALMRNDIWS---------------WL
Query: ---------NLPLIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLL
+L K L A G ++ G +D SPV+K T+IR++ +A+ WP+R +D+NN FL G L +EV+MS PPG +D+ +P V L
Subjt: ---------NLPLIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTMALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLL
Query: WISSFVYFIRNLPGRTW
+Y ++ P R W
Subjt: WISSFVYFIRNLPGRTW
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.3e-13 | 23.53 | Show/hide |
Query: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLET
V G+ L F+D +PP I G D ++ NP+Y W RQD LI S LG++S + V TA IW L +++ + V +L
Subjt: VRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSMSNEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLET
Query: TKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDS---------------------------------------TVNLYQQLNNNNH
+ D LA GK + D+ V +L+ L +Y T N+ N N +
Subjt: TKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKGLGSEYDS---------------------------------------TVNLYQQLNNNNH
Query: QFKKARGETMEVKGIRITMESETTSEIGITMGN-----------------HNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHGFFPPHQPPYTTYSLR
+ + RG+ S S G N H+A L QS NQ +++P F P Q P ++
Subjt: QFKKARGETMEVKGIRITMESETTSEIGITMGN-----------------HNANFVVVLDTLQSAVTSDLSGGIKNQASASTPHGFFPPHQPPYTTYSLR
Query: HDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWP
N N W DSGA++H+TSD +NL+ YTG + V +G+++ + H G + P
Subjt: HDLNKENQWYPDSGASNHVTSDLSNLNMGTDYTGDNKVHEGNGASLDVLHIGLLNWP
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 4.9e-05 | 26.58 | Show/hide |
Query: NPVSTPISSF--PYDLATPPYLS-DTTSKIED-YPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSMSN
+P S P S + P D+ P S SK ED Y R+ L+ FID P F +P Y+ W + + ++ W + SM++
Subjt: NPVSTPISSF--PYDLATPPYLS-DTTSKIED-YPHKPTCVRTSLKGHGLGHFIDDDAQIPPKFIQSGDDPSSKIPNPEYETWIRQDNLISSWFLGSMSN
Query: EILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNL
++L V+ ETA +W L F ++ +L+ +L T ++G S+++YF K+ +
Subjt: EILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNL
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| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 5.6e-09 | 25.23 | Show/hide |
Query: WIRQDNLISSWFLGSMS-NEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKG
W ++D ++ G+++ + + T++DIW + +F + A+ L+L ++L T G + + DY+ K+K L DSL ++ + V+++L G
Subjt: WIRQDNLISSWFLGSMS-NEILSKVLDCETAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAAGKKISQDDHVLHILKG
Query: LGSEYDSTVNL
L ++D+ +N+
Subjt: LGSEYDSTVNL
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 5.6e-09 | 24.24 | Show/hide |
Query: EPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLP-----------------------LIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTM
EP EA + W AM E A+ W LP K L A G ++ G +D + SPV K T+++++ +
Subjt: EPPLVKEALKSSHWVDAMRTEYEALMRNDIWSWLNLP-----------------------LIKRSLYANGSSRSRGTPMDLLLVTSPVVKPTTIRVLFTM
Query: ALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNLPGRTW
+ + + L +DI+N FL+G L+EE++M PPG + + + + ++ +Y ++ R W
Subjt: ALAFGWPLRHVDINNVFLHGLLNEEVFMSHPPGMLDQSKPHMVSHLLLWISSFVYFIRNLPGRTW
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| AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 1.2e-11 | 31.5 | Show/hide |
Query: GDDPSSKIPNPEYE-TWIRQDNLISSWFLGSMSNEILSKVLDCE-TAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAA
G S P P E W +D L+ W G++++ +L ++ TA+D+W L F A+ L+ + +L TT LS+ +Y K+K+L D L
Subjt: GDDPSSKIPNPEYE-TWIRQDNLISSWFLGSMSNEILSKVLDCE-TAKDIWTVLNARFSSRNLAQVLKLKTKLETTKKGSLSLKDYFMKIKNLVDSLAAA
Query: GKKISQDDHVLHILKGLGSEYDSTVNL
IS V+H+L GL +YD +N+
Subjt: GKKISQDDHVLHILKGLGSEYDSTVNL
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