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Lag0021959 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021959
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUPF0496 protein 4-like
Genome locationchr7:14615835..14616343
RNA-Seq ExpressionLag0021959
SyntenyLag0021959
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593278.1 Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2246.93Show/hide
Query:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL
        M+LL  SFNK C K  N HH+RH  +A FSVS LQ F+ EVSSCLNQLLLSS D   LSF WL QL           AKLVVDL+ PV K GADL    L
Subjt:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL

Query:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
          +++    L S         NS L          S           IV K +F GLEN+G V D+KKG SG+E AIE+
Subjt:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

KAG7025628.1 Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-2246.37Show/hide
Query:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL
        M+LL  SFNK C K  N HH+RH  +A FSVS LQ F+ EVSSCLNQLLLSS D + LSF WL QL           AKLVVDL+ PV K GADL    L
Subjt:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL

Query:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
          +++    L S         NS L          S           IV K +F G+EN+G V D+KKG SG+E AIE+
Subjt:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

XP_022960422.1 protein BPS1, chloroplastic-like [Cucurbita moschata]8.6e-2246.37Show/hide
Query:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL
        M+LL  SFNK C K  N HH+RH  +A FSVS LQ F+ EVSSCLNQLLLSS D   LSF WL QL           AKLVVDL+ PV K GADL    L
Subjt:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL

Query:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
          +++    L S         NS L          S           IV K +F GLEN+G V D+KKG S +E AIE+
Subjt:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

XP_023514538.1 protein BPS1, chloroplastic-like [Cucurbita pepo subsp. pepo]2.9e-2246.93Show/hide
Query:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL
        M+LL  SFNK C K  N HH+RH  +A FSVS LQ F+ EVSSCLNQLLLSS D   LSF WL QL           AKLVVDL+ PV K GADL    L
Subjt:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL

Query:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
          +++    L S         NS L          S           IV K +F GLEN+G V D+KKG SG+E AIE+
Subjt:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

XP_038896303.1 protein BPS1, chloroplastic-like [Benincasa hispida]4.2e-2950.28Show/hide
Query:  MVLLFHSFNKLCFKLDNHHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL------------AKLVVDLEYPVGKCGADLFFSIL
        M LL  +FNKLC KLDNHH+R  CK+ FSVSRLQ FE +VSSCLNQLLLS+ DLK LSF+WL QL            AKLVVDLEYPVGK GADL    L
Subjt:  MVLLFHSFNKLCFKLDNHHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL------------AKLVVDLEYPVGKCGADLFFSIL

Query:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
          +++    L S         NS +  +       S           IV K SF G E +G V+D+KKGCS +E AIEK
Subjt:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

TrEMBL top hitse value%identityAlignment
A0A1S4E356 UPF0496 protein 4-like3.3e-1944.51Show/hide
Query:  MVLLFHSFNKLCFKLDNHH-NRHACK-ALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL------------AKLVVDLEYPVGKCGADLFFS
        M LL  +FNK C KLDN H NRH  K A FS+SRL  FE +VS+CLN LLLS+   K LSF +L QL            AKLVVDLEYPVG+  ADL   
Subjt:  MVLLFHSFNKLCFKLDNHH-NRHACK-ALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL------------AKLVVDLEYPVGKCGADLFFS

Query:  ILIGAISTFPFLRSEPNSELPFNGGCPSEIS-------------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
         L  +++    L S   S L   G     +S                   I  K    GLE +G V+D KKGCSG+E AIEK
Subjt:  ILIGAISTFPFLRSEPNSELPFNGGCPSEIS-------------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

A0A5D3CEU0 UPF0496 protein 4-like3.3e-1944.51Show/hide
Query:  MVLLFHSFNKLCFKLDNHH-NRHACK-ALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL------------AKLVVDLEYPVGKCGADLFFS
        M LL  +FNK C KLDN H NRH  K A FS+SRL  FE +VS+CLN LLLS+   K LSF +L QL            AKLVVDLEYPVG+  ADL   
Subjt:  MVLLFHSFNKLCFKLDNHH-NRHACK-ALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL------------AKLVVDLEYPVGKCGADLFFS

Query:  ILIGAISTFPFLRSEPNSELPFNGGCPSEIS-------------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
         L  +++    L S   S L   G     +S                   I  K    GLE +G V+D KKGCSG+E AIEK
Subjt:  ILIGAISTFPFLRSEPNSELPFNGGCPSEIS-------------------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

A0A6J1DLC1 UPF0496 protein 4-like1.9e-1941.53Show/hide
Query:  MVLLFHSFNKLCFKLDNHHN-----RHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLF
        MVLL  +FNKLC KLDNHH+     RH  +A  + S LQ FE +VSSCL Q   SS D +LLSF WL QL            KL V+LE+PVG+   DL 
Subjt:  MVLLFHSFNKLCFKLDNHHN-----RHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLF

Query:  FSILIGAISTFPFLRSEPNS-------------ELPFNGGCPSEI-----SIVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
           L   ++    L S   S              L      PS        IVPK +FR  E K  VRD++KGCSG++ AIE+
Subjt:  FSILIGAISTFPFLRSEPNS-------------ELPFNGGCPSEI-----SIVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

A0A6J1H7D5 protein BPS1, chloroplastic-like4.1e-2246.37Show/hide
Query:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL
        M+LL  SFNK C K  N HH+RH  +A FSVS LQ F+ EVSSCLNQLLLSS D   LSF WL QL           AKLVVDL+ PV K GADL    L
Subjt:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL

Query:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK
          +++    L S         NS L          S           IV K +F GLEN+G V D+KKG S +E AIE+
Subjt:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIEK

A0A6J1KTC2 protein BPS1, chloroplastic-like1.6e-2145.51Show/hide
Query:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL
        M+LL  +FNK C K  N HH+RH  +A FSVS LQ F+ EVSSCLNQLLL S D   LSF WL QL           +KLVVDL+ PV K GADL    L
Subjt:  MVLLFHSFNKLCFKLDN-HHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQL-----------AKLVVDLEYPVGKCGADLFFSIL

Query:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIE
          +++    L S         NS L          S           IV K +F GLEN+G V D+KK CSG+E AIE
Subjt:  IGAISTFPFLRSEP-------NSELPFNGGCPSEIS-----------IVPKTSFRGLENKGTVRDKKKGCSGKESAIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTTTTGTTTCATTCTTTCAACAAGCTCTGTTTCAAGCTTGACAATCACCACAACCGCCATGCATGTAAAGCTTTGTTCTCTGTTTCTCGTCTTCAGGTCTTCGA
GGTCGAAGTCTCGTCTTGCTTGAATCAACTCTTGCTGTCGAGTTTCGATTTGAAATTGTTGTCGTTTCAATGGCTTTTTCAGCTTGCGAAATTGGTTGTTGATCTGGAGT
ACCCCGTCGGGAAATGCGGAGCCGATTTGTTTTTCTCTATCCTAATTGGTGCAATCTCGACTTTCCCTTTCTTACGCTCTGAGCCTAATTCAGAGCTCCCTTTTAATGGT
GGTTGCCCATCTGAAATTTCGATTGTCCCGAAGACAAGTTTCAGAGGATTGGAAAACAAAGGAACTGTGAGAGATAAAAAGAAGGGTTGCTCCGGCAAGGAGTCAGCGAT
CGAGAAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCCTTTTGTTTCATTCTTTCAACAAGCTCTGTTTCAAGCTTGACAATCACCACAACCGCCATGCATGTAAAGCTTTGTTCTCTGTTTCTCGTCTTCAGGTCTTCGA
GGTCGAAGTCTCGTCTTGCTTGAATCAACTCTTGCTGTCGAGTTTCGATTTGAAATTGTTGTCGTTTCAATGGCTTTTTCAGCTTGCGAAATTGGTTGTTGATCTGGAGT
ACCCCGTCGGGAAATGCGGAGCCGATTTGTTTTTCTCTATCCTAATTGGTGCAATCTCGACTTTCCCTTTCTTACGCTCTGAGCCTAATTCAGAGCTCCCTTTTAATGGT
GGTTGCCCATCTGAAATTTCGATTGTCCCGAAGACAAGTTTCAGAGGATTGGAAAACAAAGGAACTGTGAGAGATAAAAAGAAGGGTTGCTCCGGCAAGGAGTCAGCGAT
CGAGAAAAAGTAG
Protein sequenceShow/hide protein sequence
MVLLFHSFNKLCFKLDNHHNRHACKALFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLFQLAKLVVDLEYPVGKCGADLFFSILIGAISTFPFLRSEPNSELPFNG
GCPSEISIVPKTSFRGLENKGTVRDKKKGCSGKESAIEKK