CuGenDBv2

Gene ID	Lag0021966
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr7:14952951..14954912
RNA-Seq Expression	Lag0021966
Synteny	Lag0021966
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR026960 - Reverse transcriptase zinc-binding domain IPR036397 - Ribonuclease H superfamily IPR044730 - Ribonuclease H-like domain, plant type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAB4277970.1 unnamed protein product [Prunus armeniaca]

6.7e-97

37.24

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP
        M+ FRLP  L REI   +A+FWW ++ +G+ IHW +W  MC+ K  GG+GFR +  FNQ LL KQ WR+++   SL+  + K RYFPHS+F   S G  P
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP

Query:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH
        SF W+S+LWGR+LL  G RWRIG+GR + IYG  WVP +    +QS P+LP++SRVCDLF+ SG WD  KV A F  PE EAIL IPL    L DR IW+
Subjt:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH

Query:  FEKHGVFSVKSGYRLA--------FSLASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLF
        F K+G +SVKSGY  A         S      PSSS  + W+     LW+L +P K    LWR+  + LP+K  L +R +    +C  C +  E  LH  
Subjt:  FEKHGVFSVKSGYRLA--------FSLASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLF

Query:  WKCAVTREMWLCSKFSQLYQSLYHLDL---VDVIWAF--REKLGVLDFELVTVFWWSVWNLRNNLCWRGESDGRDLWSWSEEYLRAYYDVVGRRESRCSL
          C V  ++W    F   +      D+   +D +W+    +K  +  F +     W +WN RN + +  +     +     +     YD   +R S  + 
Subjt:  WKCAVTREMWLCSKFSQLYQSLYHLDL---VDVIWAF--REKLGVLDFELVTVFWWSVWNLRNNLCWRGESDGRDLWSWSEEYLRAYYDVVGRRESRCSL

Query:  QPCPRRPAEQSSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILH
        +     P     W PP G  FKLN D +   +TG  G G ++RD  G ++ A  +  P   SV   E +AL  G+  AL M  +   +E DSL+ V +++
Subjt:  QPCPRRPAEQSSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILH

Query:  GEVIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTF-SYSGCVWLEEWPMEIAAVLAGDVVLCHEGAPV
         E    +  G L+D VRRLL       V   PR  N+ AH +A  +    S  +WL+  P+ +   +  D   CHE   V
Subjt:  GEVIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTF-SYSGCVWLEEWPMEIAAVLAGDVVLCHEGAPV

ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]

9.3e-99

35.77

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP
        M+CFR+P+ L +E++  MARFWW ++++ + IHWV W+ +C+ K  GGLGFR++E FNQ LLAKQCWR+++  ESL+  + + RY P   F EA +G  P
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP

Query:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH
        SFIWRSL WG+ELL +G RWR+G+G SI +Y   W+P     ++ S P LPLS+RVCDLF+ SGQW+   ++  F   E +AIL+IPL S    D LIWH
Subjt:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH

Query:  FEKHGVFSVKSGYRLAFSLASQVC-PSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTR
        +E++G++SVKSGYRLA     ++    S+  +    +W  +W L IPNK K FLWR   + LP    L  R +  +P+C  C    E  LH  W C   +
Subjt:  FEKHGVFSVKSGYRLAFSLASQVC-PSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTR

Query:  EMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQ
        E+W  S +  + + ++ ++    +W A +      +  L     W +WN RN+  + G+S+    L S   +  + + D      +    Q  P+ P + 
Subjt:  EMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQ

Query:  SSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGEVIDSSEVG
          W PP           +V+      G G V+R+ +G  + A    +   +     E  A ++G+  A+ MGF    +E+D+   +  +      +   G
Subjt:  SSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGEVIDSSEVG

Query:  LLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEIAAVLAGDVV
         L+++V  LL+        +TPR GN+VAH LA   F  +  V W+EE P  +  VL  DV+
Subjt:  LLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEIAAVLAGDVV

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]

3.3e-104

36.77

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP
        M+CFR+P+ L +E++  MARFWW ++++ + IHWV W+ +C+ K  GGLGFR++E FNQ LLAKQCWR+++  ESL+  + + RY P   F EA +G  P
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP

Query:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH
        SFIWRSL WG+ELL +G RWR+GNG SI +Y   W+P     ++ S P LPLS+ VCDLF+ SGQW+   ++  F   E +A L+IPL S    D LIWH
Subjt:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH

Query:  FEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRI-WWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTR
        +E++G++SVKSGYRLA     ++    S        +W  +W L IPNK K FLWR   + LP    L  R +  +P+C  C    E  LH  W C   +
Subjt:  FEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRI-WWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTR

Query:  EMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQ
        E+W  S +  + +  + ++    +W A +      +  L     W +WN RN+  + G+S+    L     +  + + +      +    Q  P+ P   
Subjt:  EMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQ

Query:  SSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVR-ILHGEVIDSSEV
          W PP  G +K+N D +V+      G G V+R+ +G  + A    +   +     E  A ++G+  A+ MGF +  +E+D+   +  IL  E  +  + 
Subjt:  SSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVR-ILHGEVIDSSEV

Query:  GLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEIAAVLAGDVV
        GLL+++V  LLH        +TPR+GN+VAH LA   F  +  V W+EE P  +  VL  DV+
Subjt:  GLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEIAAVLAGDVV

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]

1.1e-123

42.5

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP
        M+CFRLP+ LIRE H   ARFWW  S+E K+IHWV+W+ +  PKC GG+GFR++ELFN+ LLAKQCWR++    S+L  VLKGRYF    F EA +   P
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP

Query:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFS-PSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIW
        S+IWRS+LWGR+LL +G RWRIGNG S+ IYG NWVP+ P+L++ S+P LPL SRV  L     G W    VR  F   E + IL IP+  G  EDRLIW
Subjt:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFS-PSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIW

Query:  HFEKHGVFSVKSGYRLAFSLASQVC---PSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCA
        ++EK GV+SV+SGY++A  L +  C   PSSS SE  R WW+  W++ IPNK KVFLWRL L+RLPT  NL KRGVE++  C  C    ED +HLFW C 
Subjt:  HFEKHGVFSVKSGYRLAFSLASQVC---PSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCA

Query:  VTREMWLCSKFSQLYQSLYHLDLVDVIWAFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-----GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCP
            +W+ SKF +L   L       ++    E L   DFE + V  W +WN RN   +   +      G +L  W+ +Y   +      RE++ +  P  
Subjt:  VTREMWLCSKFSQLYQSLYHLDLVDVIWAFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-----GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCP

Query:  RRPAEQSS--WTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGE
         R    +   W PP  G +K+NTDAS       AG G ++ +  G V+ AA   L    SVD+AE  A V+G++LA ++G                +H  
Subjt:  RRPAEQSS--WTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGE

Query:  VIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHAL---ACLTFSYSGCVWLEEWPMEIAAVL
        + D SE G ++   +            F  R GN+ AH L   A L   +S  +W+E+WP+E+ + L
Subjt:  VIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHAL---ACLTFSYSGCVWLEEWPMEIAAVL

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]

1.1e-99

35.64

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP
        M+ F++P  L  +I +AMARFWW   ++ K IHW  W+ +   K  GG+GFR++  FNQ L+AKQ WR++Q   SL+  VLK RYF H+ F  A LG +P
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP

Query:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH
        SF+WRS++WGR++L +G RWRIGNG+++ +YG+NW+P   + +  SAPS+   + V +L     QW E  +  HF   + EAI++IPL     ED+LIWH
Subjt:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH

Query:  FEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTRE
        ++K G +SVKSGY++A  +     PS S  +  +  W  +W+L IP K K+FLWR   + LPT  NL K+ V   P+C  C   VE   H   +C   R+
Subjt:  FEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTRE

Query:  MWLCSKFSQLYQSLYHLDLVDVIWAFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESDGRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQSSW
        +W  S  ++  + +Y  D+V ++  +  +   ++   V    W++W  RN   + G+ +       + E +   +  + + E     +    R   Q  W
Subjt:  MWLCSKFSQLYQSLYHLDLVDVIWAFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESDGRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQSSW

Query:  TPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGEVIDSSEVGLLM
        +PP  G  K+N DA+V  +   AG G V+RD  G    AA   L    SV +AE  A+  G+++A +        E DSL ++ +++ +    +E+G L+
Subjt:  TPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGEVIDSSEVGLLM

Query:  DDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEI
         D++  L      K   +PR+ N  AH+LA L       V WL+E P EI
Subjt:  DDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEI

TrEMBL top hits

e value

%identity

Alignment

A0A251NPF0 Reverse transcriptase domain-containing protein

4.5e-99

35.77

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP
        M+CFR+P+ L +E++  MARFWW ++++ + IHWV W+ +C+ K  GGLGFR++E FNQ LLAKQCWR+++  ESL+  + + RY P   F EA +G  P
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP

Query:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH
        SFIWRSL WG+ELL +G RWR+G+G SI +Y   W+P     ++ S P LPLS+RVCDLF+ SGQW+   ++  F   E +AIL+IPL S    D LIWH
Subjt:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH

Query:  FEKHGVFSVKSGYRLAFSLASQVC-PSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTR
        +E++G++SVKSGYRLA     ++    S+  +    +W  +W L IPNK K FLWR   + LP    L  R +  +P+C  C    E  LH  W C   +
Subjt:  FEKHGVFSVKSGYRLAFSLASQVC-PSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTR

Query:  EMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQ
        E+W  S +  + + ++ ++    +W A +      +  L     W +WN RN+  + G+S+    L S   +  + + D      +    Q  P+ P + 
Subjt:  EMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQ

Query:  SSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGEVIDSSEVG
          W PP           +V+      G G V+R+ +G  + A    +   +     E  A ++G+  A+ MGF    +E+D+   +  +      +   G
Subjt:  SSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGEVIDSSEVG

Query:  LLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEIAAVLAGDVV
         L+++V  LL+        +TPR GN+VAH LA   F  +  V W+EE P  +  VL  DV+
Subjt:  LLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEIAAVLAGDVV

A0A5E4FZN9 PREDICTED: retrotransposon

1.6e-104

36.77

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP
        M+CFR+P+ L +E++  MARFWW ++++ + IHWV W+ +C+ K  GGLGFR++E FNQ LLAKQCWR+++  ESL+  + + RY P   F EA +G  P
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP

Query:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH
        SFIWRSL WG+ELL +G RWR+GNG SI +Y   W+P     ++ S P LPLS+ VCDLF+ SGQW+   ++  F   E +A L+IPL S    D LIWH
Subjt:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH

Query:  FEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRI-WWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTR
        +E++G++SVKSGYRLA     ++    S        +W  +W L IPNK K FLWR   + LP    L  R +  +P+C  C    E  LH  W C   +
Subjt:  FEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRI-WWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTR

Query:  EMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQ
        E+W  S +  + +  + ++    +W A +      +  L     W +WN RN+  + G+S+    L     +  + + +      +    Q  P+ P   
Subjt:  EMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQ

Query:  SSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVR-ILHGEVIDSSEV
          W PP  G +K+N D +V+      G G V+R+ +G  + A    +   +     E  A ++G+  A+ MGF +  +E+D+   +  IL  E  +  + 
Subjt:  SSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVR-ILHGEVIDSSEV

Query:  GLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEIAAVLAGDVV
        GLL+++V  LLH        +TPR+GN+VAH LA   F  +  V W+EE P  +  VL  DV+
Subjt:  GLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEIAAVLAGDVV

A0A6J1DAR4 uncharacterized protein LOC111018954

5.3e-124

42.5

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP
        M+CFRLP+ LIRE H   ARFWW  S+E K+IHWV+W+ +  PKC GG+GFR++ELFN+ LLAKQCWR++    S+L  VLKGRYF    F EA +   P
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP

Query:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFS-PSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIW
        S+IWRS+LWGR+LL +G RWRIGNG S+ IYG NWVP+ P+L++ S+P LPL SRV  L     G W    VR  F   E + IL IP+  G  EDRLIW
Subjt:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFS-PSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIW

Query:  HFEKHGVFSVKSGYRLAFSLASQVC---PSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCA
        ++EK GV+SV+SGY++A  L +  C   PSSS SE  R WW+  W++ IPNK KVFLWRL L+RLPT  NL KRGVE++  C  C    ED +HLFW C 
Subjt:  HFEKHGVFSVKSGYRLAFSLASQVC---PSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCA

Query:  VTREMWLCSKFSQLYQSLYHLDLVDVIWAFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-----GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCP
            +W+ SKF +L   L       ++    E L   DFE + V  W +WN RN   +   +      G +L  W+ +Y   +      RE++ +  P  
Subjt:  VTREMWLCSKFSQLYQSLYHLDLVDVIWAFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-----GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCP

Query:  RRPAEQSS--WTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGE
         R    +   W PP  G +K+NTDAS       AG G ++ +  G V+ AA   L    SVD+AE  A V+G++LA ++G                +H  
Subjt:  RRPAEQSS--WTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGE

Query:  VIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHAL---ACLTFSYSGCVWLEEWPMEIAAVL
        + D SE G ++   +            F  R GN+ AH L   A L   +S  +W+E+WP+E+ + L
Subjt:  VIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHAL---ACLTFSYSGCVWLEEWPMEIAAVL

A0A803NHG3 Uncharacterized protein

5.3e-100

36.26

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP
        M+C+RL +  I  IHR  ARFWW  + + K+IHW  W+++CRPK  GGLGFR++ELFNQ LLAKQ WR ++   SL   VLK  YFPH     A  G   
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP

Query:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH
        SF+WRSL+WG+E++++G RWR+GNG+ + +    W+P   S +V   P  P    V DL  PSG WDE+ +RA+F   + E ILR+P     LED+++WH
Subjt:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH

Query:  FEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGL-HLFWKCAVTR
        + ++G ++V+SGYR+A  +      ++ E +  + WW  LW+L +P K K F W+L    LPT  NL+ R V   P C  CS+ V + + H  W C+  +
Subjt:  FEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGL-HLFWKCAVTR

Query:  EMWLCSKFSQLYQSLYHLDLVDVIWAFREKLGVLDFELVTVFWWSVWNLRNNLCWRGE-SDGRDLWSWSEEYLRAYYDVV---GRRESRCSLQPCPRRPA
         +W  S F    Q     D++  +      +    +E   V  W VW LRN+    G      ++  W  +YL  Y   V   GR+  R  +Q       
Subjt:  EMWLCSKFSQLYQSLYHLDLVDVIWAFREKLGVLDFELVTVFWWSVWNLRNNLCWRGE-SDGRDLWSWSEEYLRAYYDVV---GRRESRCSLQPCPRRPA

Query:  EQSSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGEVIDSSE
         QS WTPP  G  K+N D  VR   G +  GCV+R+ SG+ + A+   LP   S    E  A+  G++  +Q  F  F VE D    + ++H +     +
Subjt:  EQSSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGEVIDSSE

Query:  VGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALA
        +  +++++R L+       + F  R  N VA+ LA
Subjt:  VGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALA

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)

4.5e-99

35.77

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP
        M+CFR+P+ L +E++  MARFWW ++++ + IHWV W+ +C+ K  GGLGFR++E FNQ LLAKQCWR+++  ESL+  + + RY P   F EA +G  P
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP

Query:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH
        SFIWRSL WG+ELL +G RWR+G+G SI +Y   W+P     ++ S P LPLS+RVCDLF+ SGQW+   ++  F   E +AIL+IPL S    D LIWH
Subjt:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWH

Query:  FEKHGVFSVKSGYRLAFSLASQVC-PSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTR
        +E++G++SVKSGYRLA     ++    S+  +    +W  +W L IPNK K FLWR   + LP    L  R +  +P+C  C    E  LH  W C   +
Subjt:  FEKHGVFSVKSGYRLAFSLASQVC-PSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTR

Query:  EMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQ
        E+W  S +  + + ++ ++    +W A +      +  L     W +WN RN+  + G+S+    L S   +  + + D      +    Q  P+ P + 
Subjt:  EMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESD-GRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQ

Query:  SSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGEVIDSSEVG
          W PP           +V+      G G V+R+ +G  + A    +   +     E  A ++G+  A+ MGF    +E+D+   +  +      +   G
Subjt:  SSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGEVIDSSEVG

Query:  LLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEIAAVLAGDVV
         L+++V  LL+        +TPR GN+VAH LA   F  +  V W+EE P  +  VL  DV+
Subjt:  LLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCV-WLEEWPMEIAAVLAGDVV

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

2.7e-48

27.44

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFP---HSEFWEASLG
        M+   LP+ ++  + +    F W  + E K+ H V W  +C PK  GGLG R  +  N+ L++K  WR++Q+  SL   VL+ +Y         W    G
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFP---HSEFWEASLG

Query:  HRPSFIWRSLLWG-RELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVC--DLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLE
           S  WRS+  G R+++  G  W  G+G+ I  +   WV   P L + +         V   DL+ P   WD AK+      P      R+ LR+ +L+
Subjt:  HRPSFIWRSLLWG-RELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVC--DLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLE

Query:  ------DRLIWHFEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDG
              DRL W F + G FSV+S Y +   L     P  + +     +++ LW++ +P + K FLW +  + + T+    +R +  S +C +C   VE  
Subjt:  ------DRLIWHFEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDG

Query:  LHLFWKCAVTREMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVF----WWSVWNLRNNLCWRGESDGRDLWSWSEEYLRAYYDVVGRRES
        LH+   C     +W+     +  Q  +   L + ++    ++ G  D    T+F    WW  W  R    +   +  RD   + +E+    Y        
Subjt:  LHLFWKCAVTREMWLCSKFSQLYQSLYHLDLVDVIW-AFREKLGVLDFELVTVF----WWSVWNLRNNLCWRGESDGRDLWSWSEEYLRAYYDVVGRRES

Query:  RCSLQPCPRRPAEQSSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLV
            QP   R      W  P  G  K+NTD + R + G A  G VLRD +GA      L++ RC S   AE W +  G+  A +       +EVDS  +V
Subjt:  RCSLQPCPRRPAEQSSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLV

Query:  RILHGEVIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYS
          L   + DS  +  L+      L      +++   R  NR+A  LA   FS S
Subjt:  RILHGEVIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYS

P93295 Uncharacterized mitochondrial protein AtMg00310

2.4e-33

45.45

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPK-CMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHR
        M+CFRL + L +++  AM  FWW+  E  ++I WV+W  +C+ K   GGLGFR++  FNQ LLAKQ +R+I    +LL  +L+ RYFPHS   E S+G R
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPK-CMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHR

Query:  PSFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSL
        PS+ WRS++ GRELL RG    IG+G    ++   W+ D   L
Subjt:  PSFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSL

Arabidopsis top hits

e value

%identity

Alignment

AT2G02650.1 Ribonuclease H-like superfamily protein

4.0e-15

23.6

Show/hide

Query:  ASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTREMWLCSKF---SQLYQSLYH
        A Q  P S+E +       ++W+L +  K K FLWR V   L T   L  R ++  P+C  C    E   H+ + C  T+ +W  +     +Q       
Subjt:  ASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTREMWLCSKF---SQLYQSLYH

Query:  LDLVDVIWAFREKLGVLDFELVTVFW--WSVWNLRN-----NLCWRGESDGRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQSSWTPPVGGGFK
         D ++ +    +       +    FW  W +W  RN       C   + + R     + E+L A  +         +  P      + S W PP  G  K
Subjt:  LDLVDVIWAFREKLGVLDFELVTVFW--WSVWNLRN-----NLCWRGESDGRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQSSWTPPVGGGFK

Query:  LNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRIL-HGEVIDSSEVGLLMDDVRRLLH
         N D+     +     G  +R+ +G ++L     L        AE    +  +++    G      E DS  LV ++ +GE  D S +G L+ D+R  + 
Subjt:  LNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRIL-HGEVIDSSEVGLLMDDVRRLLH

Query:  PCGRGKVLFTPRNGNRVAHALA
              + F  R  N  A ALA
Subjt:  PCGRGKVLFTPRNGNRVAHALA

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein

6.2e-16

28.21

Show/hide

Query:  CVLCSSVVEDGLHLFWKCAVTREMWLCSKF---------SQLYQSLYHLDLVDVIWAFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESDGRDLWSWSE
        CV C    E   HL +KC   R +W  S             LY +LY +  ++V      K+G     LV    W +W  RN L ++G+         + 
Subjt:  CVLCSSVVEDGLHLFWKCAVTREMWLCSKF---------SQLYQSLYHLDLVDVIWAFREKLGVLDFELVTVFWWSVWNLRNNLCWRGESDGRDLWSWSE

Query:  EYLRAYYDVVGRRESRCSLQPCPRRPAEQSS----WTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVEL
        E LR   +      +R  L+     P  + +    W  P     K NTDA+ + +    G G +LR+ SG VL      LPR  +V  AE  AL   V  
Subjt:  EYLRAYYDVVGRRESRCSLQPCPRRPAEQSS----WTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVEL

Query:  ALQMGFLSFCVEVDSLRLVRILHGEVIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYS
          +  +     E D+  LV +L+ +    + +   ++D+++LLH     K  FTPR GN+VA  +A  + S+S
Subjt:  ALQMGFLSFCVEVDSLRLVRILHGEVIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYS

AT3G09510.1 Ribonuclease H-like superfamily protein

8.6e-34

26.86

Show/hide

Query:  LKGRYFPHSEFWEASLGHRPSFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQ---WDEAKVRAHFLG
        +K RYF      +A +  + S+ W SLL G  LL +G R  IG+G++I I   N V  +P  R  +         + +LF   G    WD++K+      
Subjt:  LKGRYFPHSEFWEASLGHRPSFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQ---WDEAKVRAHFLG

Query:  PECEAILRIPLRSGLLEDRLIWHFEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPL
         +   I RI L      D++IW++   G ++V+SGY L     S   P+ +         + +W L I  K K FLWR + + L T   L  RG+ + P 
Subjt:  PECEAILRIPLRSGLLEDRLIWHFEKHGVFSVKSGYRLAFSLASQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPL

Query:  CVLCSSVVEDGLHLFWKCAVTREMWLCSKFSQLYQSLYHLDL---VDVIWAFREKLGVLDFELVTVFW--WSVWNLRNNLCWR--GESDGRDLWSWSEEY
        C  C    E   H  + C      W  S  S +   L   D    +  I  F +   + DF  +   W  W +W  RNN+ +    ES  + + S   E 
Subjt:  CVLCSSVVEDGLHLFWKCAVTREMWLCSKFSQLYQSLYHLDL---VDVIWAFREKLGVLDFELVTVFW--WSVWNLRNNLCWR--GESDGRDLWSWSEEY

Query:  LRAYYDVVGRRESRCSLQPCPRRPAEQS-SWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMG
            +D +   +S        R+ AE    W  P     K N DA       EA GG ++R+  G  +    + L    +   AE  AL+  ++     G
Subjt:  LRAYYDVVGRRESRCSLQPCPRRPAEQS-SWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMG

Query:  FLSFCVEVDSLRLVRILHGEVIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALA--CLTFS--YSGC----VWLEEW
        +    +E D   L+ +++G    SS    L +D+    +     +  F  R GN++AH LA    T+S  YSG     +WL+ +
Subjt:  FLSFCVEVDSLRLVRILHGEVIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALA--CLTFS--YSGC----VWLEEW

AT4G29090.1 Ribonuclease H-like superfamily protein

4.1e-68

31.91

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP
        M CF LP+ + ++I   +A FWW   +E K +HW +WDH+   K  GG+GF+++E FN  LL KQ WR++   ESL+  V K RYF  S+   A LG RP
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRP

Query:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNP---SLRVQSAPSLPLSS-----RVCDLFSPSG-QWDEAKVRAHFLGPECEAILRIPLRSG
        SF+W+S+   +E+L +G R  +GNG  I I+   W+   P   +LR+Q  P    +S     +V DL   SG +W +  +   F  PE E  L   LR G
Subjt:  SFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNP---SLRVQSAPSLPLSS-----RVCDLFSPSG-QWDEAKVRAHFLGPECEAILRIPLRSG

Query:  --LLEDRLIWHFEKHGVFSVKSGYRLAFSLASQVCPSSSESEP-WRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDG
           + D   W +   G ++VKSGY +   + ++       SEP     +  +W+     K + FLW+ +   LP    L  R +     C+ C S  E  
Subjt:  --LLEDRLIWHFEKHGVFSVKSGYRLAFSLASQVCPSSSESEP-WRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDG

Query:  LHLFWKCAVTREMWLCSKF-----SQLYQSLYHLDLVDVIWAFREKLGVLDFE----LVTVFWWSVWNLRNNLCWRGESDGRDLWSWSEEYLRAYYDVVG
         HL +KC   R  W  S        +   S+Y    V++ W F    G   +E    LV    W +W  RN L +RG          ++E LR   D + 
Subjt:  LHLFWKCAVTREMWLCSKF-----SQLYQSLYHLDLVDVIWAFREKLGVLDFE----LVTVFWWSVWNLRNNLCWRGESDGRDLWSWSEEYLRAYYDVVG

Query:  RRESRCSLQPCPRRPAEQSS----WTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCV
            R   + C  +P    S    W PP     K NTDA+   D    G G VLR+  G V       LP+  SV  AE  A+   V    +  +     
Subjt:  RRESRCSLQPCPRRPAEQSS----WTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCV

Query:  EVDSLRLVRILHGEVIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSY
        E DS  L+ IL+ + I  S +   + D++RLL      K +F PR GN +A  +A  + S+
Subjt:  EVDSLRLVRILHGEVIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSY

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.7e-34

45.45

Show/hide

Query:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPK-CMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHR
        M+CFRL + L +++  AM  FWW+  E  ++I WV+W  +C+ K   GGLGFR++  FNQ LLAKQ +R+I    +LL  +L+ RYFPHS   E S+G R
Subjt:  MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPK-CMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHR

Query:  PSFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSL
        PS+ WRS++ GRELL RG    IG+G    ++   W+ D   L
Subjt:  PSFIWRSLLWGRELLVRGCRWRIGNGRSIPIYGSNWVPDNPSL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATTGCTTTCGTCTGCCTCGTTGCCTGATTAGAGAAATCCATCGGGCCATGGCCAGGTTCTGGTGGAATGAGTCTGAGGAGGGGAAGAGGATCCATTGGGTGAGTTG
GGACCACATGTGTCGTCCTAAGTGTATGGGGGGTTTGGGTTTCCGTAATATGGAGCTTTTTAATCAAGTGCTTTTGGCTAAACAGTGCTGGCGAGTAATCCAGGATTCTG
AATCCCTTTTGGGTGCCGTTCTGAAGGGTAGGTATTTTCCTCACTCTGAGTTTTGGGAGGCGTCTCTGGGTCATCGGCCTTCGTTCATCTGGCGCAGTCTGTTGTGGGGT
CGGGAGCTGCTGGTTCGAGGGTGCAGGTGGAGGATTGGGAATGGTCGATCTATTCCCATATATGGTTCGAATTGGGTGCCGGATAATCCGTCTCTGCGTGTGCAGTCTGC
TCCTTCGCTTCCTTTATCAAGTAGGGTCTGTGATTTGTTTTCTCCGTCAGGACAGTGGGACGAGGCTAAGGTGCGTGCCCATTTTTTGGGGCCTGAGTGTGAGGCCATTC
TAAGGATTCCCTTGCGCTCTGGACTGCTTGAAGATCGACTTATTTGGCATTTTGAGAAGCATGGTGTGTTCTCTGTGAAGAGTGGGTATAGGTTGGCTTTCTCCTTGGCG
TCCCAGGTGTGTCCGTCTTCTTCTGAGTCTGAGCCCTGGCGGATTTGGTGGTCTAGTCTATGGAGACTTGGGATCCCGAATAAGCACAAGGTTTTCCTATGGCGTCTCGT
CCTGGAACGGCTGCCCACTAAGGTAAATCTCCTTAAAAGAGGAGTTGAGGTGTCGCCTTTGTGTGTATTGTGTAGTTCTGTGGTGGAGGATGGTCTCCATCTTTTTTGGA
AGTGCGCCGTGACTAGGGAAATGTGGCTCTGCTCGAAATTTTCTCAGCTATACCAGTCGTTATACCACCTGGATCTTGTTGATGTCATCTGGGCATTTAGGGAGAAGTTG
GGCGTATTAGACTTTGAGCTTGTGACGGTGTTCTGGTGGTCAGTTTGGAATTTACGTAACAATTTGTGTTGGAGGGGAGAATCTGATGGTCGAGATTTGTGGTCATGGTC
TGAAGAGTATCTGAGGGCGTACTATGATGTTGTCGGGCGGCGGGAGTCTCGTTGTAGTTTGCAGCCTTGTCCCAGGCGACCGGCCGAGCAGTCTTCATGGACTCCCCCGG
TGGGCGGCGGATTTAAGTTGAACACCGATGCCTCGGTTAGGCCTGATACGGGTGAAGCGGGGGGAGGTTGTGTTCTTCGGGATATGTCTGGTGCAGTGCTTTTAGCGGCA
TGTTTGGACCTGCCCAGGTGCTGGAGTGTGGATCTGGCGGAAGGTTGGGCATTGGTGAAGGGCGTGGAGCTAGCGCTACAGATGGGTTTCTTAAGTTTCTGTGTCGAGGT
GGATTCATTAAGGCTGGTTCGAATTCTACATGGGGAGGTGATTGATTCTTCAGAAGTAGGCCTGTTGATGGATGATGTCCGACGTCTTCTCCATCCTTGTGGGAGGGGAA
AGGTCCTTTTTACGCCACGGAATGGGAATAGAGTGGCTCATGCTCTAGCCTGTTTGACCTTCTCCTATTCGGGTTGCGTTTGGCTGGAGGAGTGGCCTATGGAAATCGCT
GCGGTGCTGGCTGGGGATGTCGTGTTGTGTCATGAGGGGGCCCCTGTAGGGGAGAGTGAGCGCTCCATGCCGTCTCCAGTGGCGGTTGAGTTTGAGCAGGTCGAGAGCGG
GAGTGGTCCAAGGAATCAACTGTACTGGGATGCGATCAGACTGAGTAGCGGAAACCTCTACCCAATGCTGGGGTGCAGATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNCFRLPRCLIREIHRAMARFWWNESEEGKRIHWVSWDHMCRPKCMGGLGFRNMELFNQVLLAKQCWRVIQDSESLLGAVLKGRYFPHSEFWEASLGHRPSFIWRSLLWG
RELLVRGCRWRIGNGRSIPIYGSNWVPDNPSLRVQSAPSLPLSSRVCDLFSPSGQWDEAKVRAHFLGPECEAILRIPLRSGLLEDRLIWHFEKHGVFSVKSGYRLAFSLA
SQVCPSSSESEPWRIWWSSLWRLGIPNKHKVFLWRLVLERLPTKVNLLKRGVEVSPLCVLCSSVVEDGLHLFWKCAVTREMWLCSKFSQLYQSLYHLDLVDVIWAFREKL
GVLDFELVTVFWWSVWNLRNNLCWRGESDGRDLWSWSEEYLRAYYDVVGRRESRCSLQPCPRRPAEQSSWTPPVGGGFKLNTDASVRPDTGEAGGGCVLRDMSGAVLLAA
CLDLPRCWSVDLAEGWALVKGVELALQMGFLSFCVEVDSLRLVRILHGEVIDSSEVGLLMDDVRRLLHPCGRGKVLFTPRNGNRVAHALACLTFSYSGCVWLEEWPMEIA
AVLAGDVVLCHEGAPVGESERSMPSPVAVEFEQVESGSGPRNQLYWDAIRLSSGNLYPMLGCR

Lag0021966 (gene) of Sponge gourd (AG-4) v1 genome