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Lag0021967 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021967
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiongag_pre-integrs domain-containing protein
Genome locationchr7:14976816..14977665
RNA-Seq ExpressionLag0021967
SyntenyLag0021967
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEU57388.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Tanacetum cinerariifolium]1.0e-0932.46Show/hide
Query:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDDRCHHLVEVGVRFCLFRLGDRYFKPW
        + + +T + +GIGDV LKT  G    L++IR+ P +K  LIS+G+L ++GY   FG  Q K+  GS ++         ++VEV + FC         KP 
Subjt:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDDRCHHLVEVGVRFCLFRLGDRYFKPW

Query:  SVPRRSDITIVVGV
         + ++ +I++++ V
Subjt:  SVPRRSDITIVVGV

KAG6409956.1 hypothetical protein SASPL_128000 [Salvia splendens]3.9e-0946.67Show/hide
Query:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDD
        M N   ++ +GIGD+ L T  G KLVLRD+R  P+I++N+IS GKL DDGY+  FG  + KL  GS +   E+ +
Subjt:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDD

KAG6437371.1 hypothetical protein SASPL_102286 [Salvia splendens]3.9e-0946.67Show/hide
Query:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDD
        M N   ++ +GIGD+ L T  G KLVLRD+R  P+I++N+IS GKL DDGY+  FG  + KL  GS +   E+ +
Subjt:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDD

PKI46705.1 hypothetical protein CRG98_032900 [Punica granatum]5.1e-0935.71Show/hide
Query:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLEL-EEDDRCHHLVEVGVRFCLFRLGDRYFKP
        M NG++ K  GIGDV L+T+ G KL+L+ +R  P I++NLIS G+L D+GY  EF + + KL  GS ++   ++ D  + L             D   K 
Subjt:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLEL-EEDDRCHHLVEVGVRFCLFRLGDRYFKP

Query:  WSVPRRSDITIV
        W+ P R+   ++
Subjt:  WSVPRRSDITIV

RVX08547.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.0e-0950.72Show/hide
Query:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLL
        M N   SK  GIGD+ L+T  G+KLVL+D+R+ PNI +NLISIG+L D+G+   FG  + KL  GS ++
Subjt:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLL

TrEMBL top hitse value%identityAlignment
A0A2I0HZM2 Uncharacterized protein (Fragment)4.2e-0937.74Show/hide
Query:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDDRCHHLVEVGVRFCLFRLGDRYFKPW
        M NG++ K  GIGDV L+T+ G KL+L+ +R  P I++NLIS G+L D+G+  EF + + KL  GS ++     DR       G  + +  + D   K W
Subjt:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDDRCHHLVEVGVRFCLFRLGDRYFKPW

Query:  SVPRRS
        + P R+
Subjt:  SVPRRS

A0A2I0IRS8 Uncharacterized protein2.5e-0935.71Show/hide
Query:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLEL-EEDDRCHHLVEVGVRFCLFRLGDRYFKP
        M NG++ K  GIGDV L+T+ G KL+L+ +R  P I++NLIS G+L D+GY  EF + + KL  GS ++   ++ D  + L             D   K 
Subjt:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLEL-EEDDRCHHLVEVGVRFCLFRLGDRYFKP

Query:  WSVPRRSDITIV
        W+ P R+   ++
Subjt:  WSVPRRSDITIV

A0A2I0J4S0 Integrase catalytic domain-containing protein5.5e-0944.74Show/hide
Query:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDDR
        M NG++ K  GIGDV LKT+ G KL+L+ +R  P I++NLI  G+L D+GY  EF + + KL  GS ++  ++  R
Subjt:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDDR

A0A438JHW9 Retrovirus-related Pol polyprotein from transposon TNT 1-945.0e-1050.72Show/hide
Query:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLL
        M N   SK  GIGD+ L+T  G+KLVL+D+R+ PNI +NLISIG+L D+G+   FG  + KL  GS ++
Subjt:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLL

A0A6L2L6P8 Retrovirus-related Pol polyprotein from transposon TNT 1-945.0e-1032.46Show/hide
Query:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDDRCHHLVEVGVRFCLFRLGDRYFKPW
        + + +T + +GIGDV LKT  G    L++IR+ P +K  LIS+G+L ++GY   FG  Q K+  GS ++         ++VEV + FC         KP 
Subjt:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDDRCHHLVEVGVRFCLFRLGDRYFKPW

Query:  SVPRRSDITIVVGV
         + ++ +I++++ V
Subjt:  SVPRRSDITIVVGV

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-947.7e-0843.48Show/hide
Query:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLL
        M N   SK +GIGD+ +KT  G  LVL+D+R  P+++MNLIS   L  DGY   F + + +L  GS ++
Subjt:  MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATGGTAGAACCTCCAAGACTAGTGGAATTGGAGATGTTAGTCTGAAGACACAGTGTGGAGATAAATTGGTACTGCGAGATATCAGGTTTGCGCCCAATATCAA
GATGAATCTCATTTCTATTGGCAAGTTGGTAGATGATGGTTACATGTGTGAGTTTGGCAGTTGTCAGTGTAAACTCAGGTTAGGATCCCAGTTGCTCGAGTTGGAAGAAG
ATGACAGGTGTCACCACTTAGTTGAAGTGGGAGTACGTTTCTGTCTTTTTCGTCTAGGAGACAGGTATTTTAAGCCTTGGAGTGTACCAAGAAGATCAGATATAACAATT
GTAGTGGGAGTAGATCCTTGGAGTTCGCCAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATGGTAGAACCTCCAAGACTAGTGGAATTGGAGATGTTAGTCTGAAGACACAGTGTGGAGATAAATTGGTACTGCGAGATATCAGGTTTGCGCCCAATATCAA
GATGAATCTCATTTCTATTGGCAAGTTGGTAGATGATGGTTACATGTGTGAGTTTGGCAGTTGTCAGTGTAAACTCAGGTTAGGATCCCAGTTGCTCGAGTTGGAAGAAG
ATGACAGGTGTCACCACTTAGTTGAAGTGGGAGTACGTTTCTGTCTTTTTCGTCTAGGAGACAGGTATTTTAAGCCTTGGAGTGTACCAAGAAGATCAGATATAACAATT
GTAGTGGGAGTAGATCCTTGGAGTTCGCCAAGATGA
Protein sequenceShow/hide protein sequence
MENGRTSKTSGIGDVSLKTQCGDKLVLRDIRFAPNIKMNLISIGKLVDDGYMCEFGSCQCKLRLGSQLLELEEDDRCHHLVEVGVRFCLFRLGDRYFKPWSVPRRSDITI
VVGVDPWSSPR