; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021992 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021992
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:15549160..15550107
RNA-Seq ExpressionLag0021992
SyntenyLag0021992
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382410.1 uncharacterized protein LOC107175497 [Citrus sinensis]2.5e-2134.48Show/hide
Query:  VRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEF------------------RKYAEVLGNSIGNFEDASSDNEGKMWGES
        VRIE  G NI+  K     DK R++ GGPW+FD AL++  E +G   + ++ F                  R   + LG  IG+ ED  +D EG   GE 
Subjt:  VRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEF------------------RKYAEVLGNSIGNFEDASSDNEGKMWGES

Query:  LRVKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREEGADESTKLMFGIELRET
         R+++ +D+ +PL++   V T  +     IPI YERLPDFC+ CG +G   +EC E        L +G  ++ T
Subjt:  LRVKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREEGADESTKLMFGIELRET

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]6.6e-2236.18Show/hide
Query:  IEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFRK------------------YAEVLGNSIGNFEDASSDNEGKMWGESLR
        +E  GKN++        D NR++  GPW FD ALI+ ++   + ++ + EF +                   A  LGN+IGNF D   + +G  WG SLR
Subjt:  IEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFRK------------------YAEVLGNSIGNFEDASSDNEGKMWGESLR

Query:  VKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQEC
        ++V ID+ +PL++G  +         WIPI YERLPDFCY+CG +G    +C
Subjt:  VKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQEC

XP_024037025.1 uncharacterized protein LOC112096996 [Citrus clementina]4.3e-2134.48Show/hide
Query:  VRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEF------------------RKYAEVLGNSIGNFEDASSDNEGKMWGES
        VRIE  G NI+  K     DK R++ GGPW+FD AL++  E +G   + ++ F                  R   + LG  IG+ ED  +D EG   GE 
Subjt:  VRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEF------------------RKYAEVLGNSIGNFEDASSDNEGKMWGES

Query:  LRVKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREEGADESTKLMFGIELRET
         R+++ +D+ +PL++   V T  +     IPI YERLPDFC+ CG +G   +EC E        L +G  ++ T
Subjt:  LRVKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREEGADESTKLMFGIELRET

XP_024955847.1 uncharacterized protein LOC112498636 [Citrus sinensis]1.9e-2133.91Show/hide
Query:  VRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEF------------------RKYAEVLGNSIGNFEDASSDNEGKMWGES
        VRIE  G NI+  K     DK R++ GGPW+FD AL++  E +G   + ++ F                  R   + LG  IG+ E+  +D EG   G+ 
Subjt:  VRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEF------------------RKYAEVLGNSIGNFEDASSDNEGKMWGES

Query:  LRVKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREEGADESTKLMFGIELRET
         R+++ +D+ +PL++   V T  +G    IPI YERLPDFC+ CG +G   +EC E        L +G  ++ T
Subjt:  LRVKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREEGADESTKLMFGIELRET

XP_035547259.1 uncharacterized protein LOC118348856 [Juglans regia]4.3e-2135.29Show/hide
Query:  VRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFRKYAEVLGNSIGNFEDASSDNEGKMWGESLRVKVQIDVKEPLKQGTS
        V  +  G N++  + +  RDK RI+  GPW+FD  L++ +++ GN         K   ++GN IG  E+   +     WGE LR++V++++ +PL +G +
Subjt:  VRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFRKYAEVLGNSIGNFEDASSDNEGKMWGESLRVKVQIDVKEPLKQGTS

Query:  VRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECR---EEGADESTKLMFG
        V+    G   WI   YERLP+FCY CGKLG  +++C     +GA ++ +L FG
Subjt:  VRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECR---EEGADESTKLMFG

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054816.7e-2036.26Show/hide
Query:  IEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFRK------------------YAEVLGNSIGNFEDASSDNEGKMWGESLR
        ++  G NI+        D+NRI+  GPW FD ALII +         D +FR                    A  LGN+IG FED  S+     WG  LR
Subjt:  IEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFRK------------------YAEVLGNSIGNFEDASSDNEGKMWGESLR

Query:  VKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREEGADESTK-LMFGIELR
        V+V+ DV +PL +G  +         WIPI YERLPDF Y+CG+L  + ++C +   D  +K L +G  LR
Subjt:  VKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREEGADESTK-LMFGIELR

A0A6J1D765 uncharacterized protein LOC1110179023.9e-2032.04Show/hide
Query:  RIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFR------------------KYAEVLGNSIGNFEDASSDNEGKMWGESL
        R E  G NIY    KSL +K+R+++ GPW F+ +L++       N   D  F                   + A +LG  +G+ E+   D      G  +
Subjt:  RIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFR------------------KYAEVLGNSIGNFEDASSDNEGKMWGESL

Query:  RVKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREEGADESTKL--MFGIELRETQASEGI
        RV+V+IDV +PL++G  ++ +S G+  W P+ YE+LPDFCY CGK+G   +EC +     +T     +G  LR T   + +
Subjt:  RVKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREEGADESTKL--MFGIELRETQASEGI

A0A6J1DU55 uncharacterized protein LOC1110231353.2e-2236.18Show/hide
Query:  IEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFRK------------------YAEVLGNSIGNFEDASSDNEGKMWGESLR
        +E  GKN++        D NR++  GPW FD ALI+ ++   + ++ + EF +                   A  LGN+IGNF D   + +G  WG SLR
Subjt:  IEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFRK------------------YAEVLGNSIGNFEDASSDNEGKMWGESLR

Query:  VKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQEC
        ++V ID+ +PL++G  +         WIPI YERLPDFCY+CG +G    +C
Subjt:  VKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQEC

A0A6P9EID8 uncharacterized protein LOC1183488562.1e-2135.29Show/hide
Query:  VRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFRKYAEVLGNSIGNFEDASSDNEGKMWGESLRVKVQIDVKEPLKQGTS
        V  +  G N++  + +  RDK RI+  GPW+FD  L++ +++ GN         K   ++GN IG  E+   +     WGE LR++V++++ +PL +G +
Subjt:  VRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLEDKEFRKYAEVLGNSIGNFEDASSDNEGKMWGESLRVKVQIDVKEPLKQGTS

Query:  VRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECR---EEGADESTKLMFG
        V+    G   WI   YERLP+FCY CGKLG  +++C     +GA ++ +L FG
Subjt:  VRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECR---EEGADESTKLMFG

A0A7N2R0C3 Reverse transcriptase domain-containing protein1.9e-1930.85Show/hide
Query:  KEDGFVRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLED------------------KEFRKYAEVLGNSIGNFEDASSDNEGK
        K +  +++   G+ ++  + +  RDK R+++  PW+++  L++F+E  G+ S +D                     ++  + +G SIG F +   +  G 
Subjt:  KEDGFVRIEKAGKNIYQCKLKSLRDKNRIVNGGPWNFDDALIIFEEMRGNNSLED------------------KEFRKYAEVLGNSIGNFEDASSDNEGK

Query:  MWGESLRVKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREE-GAD---ESTKLMFGIELRETQASEG
         WG  LRV+V+IDV   L +G  +    KGE RW+   YERLP+FCY CG L    ++C EE G D   E + L +G  LR     +G
Subjt:  MWGESLRVKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVRQECREE-GAD---ESTKLMFGIELRETQASEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGAAGGGCAACATAGAGGTTTGCTTAGAGGGGTCCAATGGTGACCAAGGAGGAAGCGTGGAGAAACTCATGGAGCAACACAGCACCAAGGGATACACTGAGAA
CGCAAAAGGCGGCTCACCGGCGAAGGAGATGGAGATAACAGCTGCGTCTGAAATCGATCCCAAGATCCCGGAAGTGAAGGAAAATGAGGCAGTTCTCAATCTGCTGCAAA
AGCTAAAGATAGCAGAAAAGAGCAGAAAAGAGGACGGCTTTGTCAGGATTGAGAAAGCAGGGAAAAACATCTACCAGTGCAAACTTAAATCGCTAAGAGACAAAAACAGA
ATAGTTAATGGAGGGCCCTGGAACTTCGATGATGCACTAATCATATTTGAAGAAATGAGAGGGAACAACAGCTTAGAGGATAAGGAATTCAGGAAATATGCCGAAGTGCT
GGGGAACTCGATTGGTAACTTCGAAGATGCCAGTTCAGACAATGAAGGGAAGATGTGGGGAGAGAGCCTGAGAGTTAAAGTTCAAATTGATGTCAAAGAACCCCTGAAAC
AGGGCACGAGTGTGAGAACGAGCTCTAAAGGGGAGGCCAGGTGGATCCCAATCACATACGAGAGACTACCCGATTTCTGCTACTACTGTGGAAAATTAGGAGATGTTCGG
CAAGAGTGCAGGGAAGAAGGGGCAGATGAGTCGACGAAACTGATGTTTGGTATTGAATTAAGGGAAACCCAAGCTAGTGAAGGGATATACAAAAACATAAAAACAGGGGG
GTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACATGAAGGGCAACATAGAGGTTTGCTTAGAGGGGTCCAATGGTGACCAAGGAGGAAGCGTGGAGAAACTCATGGAGCAACACAGCACCAAGGGATACACTGAGAA
CGCAAAAGGCGGCTCACCGGCGAAGGAGATGGAGATAACAGCTGCGTCTGAAATCGATCCCAAGATCCCGGAAGTGAAGGAAAATGAGGCAGTTCTCAATCTGCTGCAAA
AGCTAAAGATAGCAGAAAAGAGCAGAAAAGAGGACGGCTTTGTCAGGATTGAGAAAGCAGGGAAAAACATCTACCAGTGCAAACTTAAATCGCTAAGAGACAAAAACAGA
ATAGTTAATGGAGGGCCCTGGAACTTCGATGATGCACTAATCATATTTGAAGAAATGAGAGGGAACAACAGCTTAGAGGATAAGGAATTCAGGAAATATGCCGAAGTGCT
GGGGAACTCGATTGGTAACTTCGAAGATGCCAGTTCAGACAATGAAGGGAAGATGTGGGGAGAGAGCCTGAGAGTTAAAGTTCAAATTGATGTCAAAGAACCCCTGAAAC
AGGGCACGAGTGTGAGAACGAGCTCTAAAGGGGAGGCCAGGTGGATCCCAATCACATACGAGAGACTACCCGATTTCTGCTACTACTGTGGAAAATTAGGAGATGTTCGG
CAAGAGTGCAGGGAAGAAGGGGCAGATGAGTCGACGAAACTGATGTTTGGTATTGAATTAAGGGAAACCCAAGCTAGTGAAGGGATATACAAAAACATAAAAACAGGGGG
GTGA
Protein sequenceShow/hide protein sequence
MDMKGNIEVCLEGSNGDQGGSVEKLMEQHSTKGYTENAKGGSPAKEMEITAASEIDPKIPEVKENEAVLNLLQKLKIAEKSRKEDGFVRIEKAGKNIYQCKLKSLRDKNR
IVNGGPWNFDDALIIFEEMRGNNSLEDKEFRKYAEVLGNSIGNFEDASSDNEGKMWGESLRVKVQIDVKEPLKQGTSVRTSSKGEARWIPITYERLPDFCYYCGKLGDVR
QECREEGADESTKLMFGIELRETQASEGIYKNIKTGG