; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022016 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022016
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:15966714..15969728
RNA-Seq ExpressionLag0022016
SyntenyLag0022016
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]1.1e-4136.88Show/hide
Query:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS
        GG+  +DLE FNQ L AKQCWRI++   S +A + + R HP + FL AEVG+  SFIWRSL WG+ELL KGLR R+G+G  + VY   W+P     ++ S
Subjt:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS

Query:  PVTLAPETRVADLITRSGQWNEQLIRQ--------------------------HFSPHEFPSSSSDESIMG-------------------WWMGCWRMLI
        P  L   TRV DL T SGQWN  L++                           H+  +   S  S   + G                   +W   W + I
Subjt:  PVTLAPETRVADLITRSGQWNEQLIRQ--------------------------HFSPHEFPSSSSDESIMG-------------------WWMGCWRMLI

Query:  PNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFG
        PNK+K FLWR   D LP    L  R +    +C  C +  ES LH  W C+  + V R+S +G
Subjt:  PNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFG

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]4.3e-4136.88Show/hide
Query:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS
        GG+  +DLE FNQ L AKQCWRI++   S +A + + R HP + FL AEVG+  SFIWRSL WG+ELL KGLR R+GNG  + VY   W+P     ++ S
Subjt:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS

Query:  PVTLAPETRVADLITRSGQWNEQLIRQHFSPHEFPSS----------------------------------------SSDESI-----MGWWMGCWRMLI
        P  L   T V DL T SGQWN  L++  F   E  +                                         S + S+       +W   W + I
Subjt:  PVTLAPETRVADLITRSGQWNEQLIRQHFSPHEFPSS----------------------------------------SSDESI-----MGWWMGCWRMLI

Query:  PNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFG
        PNK+K FLWR   D LP    L  R +    +C  C +  ES LH  W C+  + V R+S +G
Subjt:  PNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFG

XP_015382226.1 uncharacterized protein LOC107175329, partial [Citrus sinensis]9.0e-3932.11Show/hide
Query:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS
        GGM  +D   FNQ L AKQ WRI+QH  S +A VLK +      F+ A++GSR SF+WRS+LWGR++++KGLR +IG+G  V +Y++NW+P     +  S
Subjt:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS

Query:  PVTLAPETRVADLITRSGQWNEQLIRQHF-----------------SPHEF-------------------------PSSSSDESIMGWWMGCWRMLIPNK
        P TL  +  VADLI  +  W +++  QHF                  P ++                          S  S +S +  W   W   +P K
Subjt:  PVTLAPETRVADLITRSGQWNEQLIRQHF-----------------SPHEF-------------------------PSSSSDESIMGWWMGCWRMLIPNK

Query:  VKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFGILVHDVQAWSIFNLLRERKFKGFKPVMGLVE---WTVSY
        +KIF+WR   + LPT +NL  R +    +C  CG   E  +H    CK  ++V R++     +  +    +  +L E + K  K  + L+    WT+ Y
Subjt:  VKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFGILVHDVQAWSIFNLLRERKFKGFKPVMGLVE---WTVSY

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]6.0e-6733.86Show/hide
Query:  NCFRLPMNCYGGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWI
        N   LP  C GGM  +DLE+FN+ L AKQCWRI+ H +S L+ VLKGR      F+ A++    S+IWRS+LWGR+LLKKGLR RIGNG+ V +Y  NW+
Subjt:  NCFRLPMNCYGGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWI

Query:  PDDGGLRVRSPVTLAPETRVADLIT-RSGQWNEQLIRQHFSPHE---------------------------------------------FPSSSSDESIM
        P+   L++ S   L   +RV+ L+    G W   ++R  F+P E                                              PSSSS E + 
Subjt:  PDDGGLRVRSPVTLAPETRVADLIT-RSGQWNEQLIRQHFSPHE---------------------------------------------FPSSSSDESIM

Query:  GWWMGCWRMLIPNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFGIL--------VHD-----------VQ
         WW G W+M IPNK+K+FLWRLCLD LPT  NLS R V++ N C  CG++GE S+H+FW CKF   +  +S+FG L         H+           V 
Subjt:  GWWMGCWRMLIPNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFGIL--------VHD-----------VQ

Query:  AWSIFNLLRERKFKG-----FKPVMGLVEWTVSYISPFQQAAAFSGLCGRSGMAREGVIWSPRRLG---------------------------GRV----
         W ++N    R F       FK  M LVEW   Y   F++A + + + GR     E ++W P   G                           G+V    
Subjt:  AWSIFNLLRERKFKG-----FKPVMGLVEWTVSYISPFQQAAAFSGLCGRSGMAREGVIWSPRRLG---------------------------GRV----

Query:  ------VRSPEMAEGWATVKGMRLVVEMGLFPLMLETGSSRVAGALQDEAVDDFSDLGALAVDLRKDISASSLARCMFTRRERNGVVHQLACLALREEES
              ++S +MAE  A V+G++L  E+G+ P                 A++D S+ G + +  +   + S  A   F +RE N   H LA  AL   E 
Subjt:  ------VRSPEMAEGWATVKGMRLVVEMGLFPLMLETGSSRVAGALQDEAVDDFSDLGALAVDLRKDISASSLARCMFTRRERNGVVHQLACLALREEES

Query:  MVWMEYVP
         +WME  P
Subjt:  MVWMEYVP

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]1.1e-4128.06Show/hide
Query:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS
        GGM  +DL  FNQ L AKQ WRI+Q  SS +A VLK R      F+ A +GS+ SF+WRS++WGR++L KG R RIGNG+ V VY  NWIP     +  S
Subjt:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS

Query:  PVTLAPETRVADLITRSGQWNEQLIRQHFSPH--------------------------------------------EFPSSSSDESIMGWWMGCWRMLIP
          ++  +T VA+LI    QW E LI QHF P                                             E PS S+ +  +  W   W++ IP
Subjt:  PVTLAPETRVADLITRSGQWNEQLIRQHFSPH--------------------------------------------EFPSSSSDESIMGWWMGCWRMLIP

Query:  NKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEF-----GILVHDV---------------------QAWSIF
         KVKIFLWR   D LPT  NL  + V    +C  C  H E+  H    C   R++ R S       G+   D+                       W+I+
Subjt:  NKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEF-----GILVHDV---------------------QAWSIF

Query:  NLLRERKFKGFKP-VMGLVEWTVSYISPFQQAAAFSGLCGRSGMAREGVIWSPRRLG-------------------GRVVR------------------S
            +  F+G K   + +V    + +  F++      +    G A     WSP   G                   G VVR                  S
Subjt:  NLLRERKFKGFKP-VMGLVEWTVSYISPFQQAAAFSGLCGRSGMAREGVIWSPRRLG-------------------GRVVR------------------S

Query:  PEMAEGWATVKGMRLVVEMGLFPLMLETGSSRVAGALQDEAVDDFSDLGALAVDLRKDISASSLARCMFTRRERNGVVHQLACLALREEESMVWMEYVP
          MAE  A   G+++  +  +   + E+ S  V   +  ++    +++G L  D+++++      +   + R+ N   H LA LAL+++E+++W++ +P
Subjt:  PEMAEGWATVKGMRLVVEMGLFPLMLETGSSRVAGALQDEAVDDFSDLGALAVDLRKDISASSLARCMFTRRERNGVVHQLACLALREEESMVWMEYVP

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein5.5e-4236.88Show/hide
Query:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS
        GG+  +DLE FNQ L AKQCWRI++   S +A + + R HP + FL AEVG+  SFIWRSL WG+ELL KGLR R+G+G  + VY   W+P     ++ S
Subjt:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS

Query:  PVTLAPETRVADLITRSGQWNEQLIRQ--------------------------HFSPHEFPSSSSDESIMG-------------------WWMGCWRMLI
        P  L   TRV DL T SGQWN  L++                           H+  +   S  S   + G                   +W   W + I
Subjt:  PVTLAPETRVADLITRSGQWNEQLIRQ--------------------------HFSPHEFPSSSSDESIMG-------------------WWMGCWRMLI

Query:  PNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFG
        PNK+K FLWR   D LP    L  R +    +C  C +  ES LH  W C+  + V R+S +G
Subjt:  PNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFG

A0A5E4FZN9 PREDICTED: retrotransposon2.1e-4136.88Show/hide
Query:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS
        GG+  +DLE FNQ L AKQCWRI++   S +A + + R HP + FL AEVG+  SFIWRSL WG+ELL KGLR R+GNG  + VY   W+P     ++ S
Subjt:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS

Query:  PVTLAPETRVADLITRSGQWNEQLIRQHFSPHEFPSS----------------------------------------SSDESI-----MGWWMGCWRMLI
        P  L   T V DL T SGQWN  L++  F   E  +                                         S + S+       +W   W + I
Subjt:  PVTLAPETRVADLITRSGQWNEQLIRQHFSPHEFPSS----------------------------------------SSDESI-----MGWWMGCWRMLI

Query:  PNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFG
        PNK+K FLWR   D LP    L  R +    +C  C +  ES LH  W C+  + V R+S +G
Subjt:  PNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFG

A0A6J1DAR4 uncharacterized protein LOC1110189542.9e-6733.86Show/hide
Query:  NCFRLPMNCYGGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWI
        N   LP  C GGM  +DLE+FN+ L AKQCWRI+ H +S L+ VLKGR      F+ A++    S+IWRS+LWGR+LLKKGLR RIGNG+ V +Y  NW+
Subjt:  NCFRLPMNCYGGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWI

Query:  PDDGGLRVRSPVTLAPETRVADLIT-RSGQWNEQLIRQHFSPHE---------------------------------------------FPSSSSDESIM
        P+   L++ S   L   +RV+ L+    G W   ++R  F+P E                                              PSSSS E + 
Subjt:  PDDGGLRVRSPVTLAPETRVADLIT-RSGQWNEQLIRQHFSPHE---------------------------------------------FPSSSSDESIM

Query:  GWWMGCWRMLIPNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFGIL--------VHD-----------VQ
         WW G W+M IPNK+K+FLWRLCLD LPT  NLS R V++ N C  CG++GE S+H+FW CKF   +  +S+FG L         H+           V 
Subjt:  GWWMGCWRMLIPNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFGIL--------VHD-----------VQ

Query:  AWSIFNLLRERKFKG-----FKPVMGLVEWTVSYISPFQQAAAFSGLCGRSGMAREGVIWSPRRLG---------------------------GRV----
         W ++N    R F       FK  M LVEW   Y   F++A + + + GR     E ++W P   G                           G+V    
Subjt:  AWSIFNLLRERKFKG-----FKPVMGLVEWTVSYISPFQQAAAFSGLCGRSGMAREGVIWSPRRLG---------------------------GRV----

Query:  ------VRSPEMAEGWATVKGMRLVVEMGLFPLMLETGSSRVAGALQDEAVDDFSDLGALAVDLRKDISASSLARCMFTRRERNGVVHQLACLALREEES
              ++S +MAE  A V+G++L  E+G+ P                 A++D S+ G + +  +   + S  A   F +RE N   H LA  AL   E 
Subjt:  ------VRSPEMAEGWATVKGMRLVVEMGLFPLMLETGSSRVAGALQDEAVDDFSDLGALAVDLRKDISASSLARCMFTRRERNGVVHQLACLALREEES

Query:  MVWMEYVP
         +WME  P
Subjt:  MVWMEYVP

A0A803PM68 Uncharacterized protein3.0e-4026.44Show/hide
Query:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS
        GG+  +DL +FNQ L AKQ WR +++ +S  + VLK    P +  L A+ G+  SF+WRSL+WG+++++KG R RIGNG  V V E  W+P     +V  
Subjt:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS

Query:  PVTLAPETRVADLITRSGQWNEQLIRQHFSPHE------FPSS------------------------------------SSDESIMGWWMGCWRMLIPNK
          +L     V DL+  +G+W+E+ IR  F+P +       P+S                                    S+ E+   WW   W++ IP K
Subjt:  PVTLAPETRVADLITRSGQWNEQLIRQHFSPHE------FPSS------------------------------------SSDESIMGWWMGCWRMLIPNK

Query:  VKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHG-ESSLHVFWHCK----------FVRRVLRDSEFGILVHDVQ----------------AWSIFN
        VK F+W++    LPT + L++R V V   C+ C     E+  H  W C+          F  R+ R  +  +L   ++                +W+++ 
Subjt:  VKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHG-ESSLHVFWHCK----------FVRRVLRDSEFGILVHDVQ----------------AWSIFN

Query:  LLRERKFKGFKP-VMGLVEWTVSYISPFQQAAAFSGLCG--RSGMAREGVIWSPR-------------RLGG-------------------------RVV
        +       G KP    +V+W   ++S F+        CG  + G+AR    W P              ++GG                         R V
Subjt:  LLRERKFKGFKP-VMGLVEWTVSYISPFQQAAAFSGLCG--RSGMAREGVIWSPR-------------RLGG-------------------------RVV

Query:  RSPEMAEGWATVKGMRLVVEMGLFPLMLETGSSRVAGALQDEAVDDFSDLGALAVDLRKDISASSLARCMFTRRERNGVVHQLACLALREEESMVWMEYV
         SP  AE  A   G++  +   L   ++ET   +    +Q E  +   DL  L   ++  +    +    F  RE N V H LA  AL  + S +W+  V
Subjt:  RSPEMAEGWATVKGMRLVVEMGLFPLMLETGSSRVAGALQDEAVDDFSDLGALAVDLRKDISASSLARCMFTRRERNGVVHQLACLALREEESMVWMEYV

Query:  PQC
        P C
Subjt:  PQC

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)5.5e-4236.88Show/hide
Query:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS
        GG+  +DLE FNQ L AKQCWRI++   S +A + + R HP + FL AEVG+  SFIWRSL WG+ELL KGLR R+G+G  + VY   W+P     ++ S
Subjt:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRS

Query:  PVTLAPETRVADLITRSGQWNEQLIRQ--------------------------HFSPHEFPSSSSDESIMG-------------------WWMGCWRMLI
        P  L   TRV DL T SGQWN  L++                           H+  +   S  S   + G                   +W   W + I
Subjt:  PVTLAPETRVADLITRSGQWNEQLIRQ--------------------------HFSPHEFPSSSSDESIMG-------------------WWMGCWRMLI

Query:  PNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFG
        PNK+K FLWR   D LP    L  R +    +C  C +  ES LH  W C+  + V R+S +G
Subjt:  PNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVRRVLRDSEFG

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.6e-1441.94Show/hide
Query:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDD
        GG+  +DL  FNQ L AKQ +RI+    + L+ +L+ R  P    +   VG+R S+ WRS++ GRELL +GL R IG+G    V+   WI D+
Subjt:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDD

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein9.3e-1025.75Show/hide
Query:  LKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRSPVTLAPETRVADLITRSGQ---WNEQLIRQHF--
        +K R    +  L A+V  + S+ W SLL G  LLKKG R  IG+G+ + +   N I D    R  +      E  + +L  R G    W++  I Q    
Subjt:  LKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVRSPVTLAPETRVADLITRSGQ---WNEQLIRQHF--

Query:  SPHEF-------PSSSSDESI------------MGWWM-----------------------GCWRMLIPNKVKIFLWRLCLDCLPTINNLSFRDVDVLNV
        S H F        S   D+ I             G+W+                         W + I  K+K FLWR     L T   L+ R + +   
Subjt:  SPHEF-------PSSSSDESI------------MGWWM-----------------------GCWRMLIPNKVKIFLWRLCLDCLPTINNLSFRDVDVLNV

Query:  CSLCGQHGESSLHVFWHCKFVRRVLRDSEFGIL
        C  C +  ES  H  + C F     R S+  ++
Subjt:  CSLCGQHGESSLHVFWHCKFVRRVLRDSEFGIL

AT4G29090.1 Ribonuclease H-like superfamily protein7.3e-2327.41Show/hide
Query:  MNCY---GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWI---
        ++CY   GG+  KD+E FN  L  KQ WR++    S +A V K R     D L A +GSR SF+W+S+   +E+L++G R  +GNGE + ++   W+   
Subjt:  MNCY---GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWI---

Query:  PDDGGLRV-RSP----VTLAPETRVADLITRSG-QWNEQLIRQHFSPHEFP--------------------SSSSDESI-MGWWM---------------
        P    LR+ R P     +++   +V+DLI  SG +W + +I   F   E                      +SS D ++  G+W+               
Subjt:  PDDGGLRV-RSP----VTLAPETRVADLITRSG-QWNEQLIRQHFSPHEFP--------------------SSSSDESI-MGWWM---------------

Query:  ---------GCWRMLIPNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVR
                   W+     K++ FLW+   + LP    L++R +   + C  C    E+  H+ + C F R
Subjt:  ---------GCWRMLIPNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVR

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.1e-1541.94Show/hide
Query:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDD
        GG+  +DL  FNQ L AKQ +RI+    + L+ +L+ R  P    +   VG+R S+ WRS++ GRELL +GL R IG+G    V+   WI D+
Subjt:  GGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGCTTTCGATTGCCAATGAATTGTTATGGTGGGATGGACTCCAAGGACCTGGAGATTTTCAATCAGACATTGTGGGCAAAGCAGTGCTGGAGAATTGTACAGCA
TCAGTCCTCCTTTTTAGCATGTGTGCTAAAGGGCAGATGTCATCCTTTCATAGATTTCTTGAGGGCGGAGGTGGGTTCGAGGCTGTCTTTTATTTGGAGGAGCCTGCTGT
GGGGGAGAGAGCTTCTAAAGAAGGGATTACGTCGGCGGATAGGGAATGGGGAAGTGGTTCCAGTGTATGAAGCGAATTGGATTCCTGATGATGGTGGTCTCAGAGTGCGG
TCACCAGTGACTTTGGCCCCTGAGACTCGGGTAGCTGATTTGATTACTAGGTCTGGGCAGTGGAACGAACAGCTCATTCGGCAACATTTTAGTCCCCACGAGTTCCCGTC
ATCCTCCTCGGATGAGTCGATTATGGGTTGGTGGATGGGGTGTTGGAGGATGTTGATTCCGAATAAGGTTAAGATATTCTTATGGAGACTCTGTTTAGATTGCCTGCCTA
CAATTAATAATTTGAGTTTTCGCGACGTGGATGTGTTAAATGTGTGTAGCCTTTGTGGCCAGCATGGTGAATCTAGCTTGCATGTCTTTTGGCATTGTAAGTTTGTTAGA
AGGGTTTTGAGGGATTCTGAGTTTGGGATCTTGGTACACGACGTGCAGGCATGGTCTATTTTTAATCTCCTTAGGGAGCGGAAATTTAAGGGGTTTAAACCAGTGATGGG
ACTAGTGGAGTGGACGGTGAGTTATATCTCACCGTTTCAACAGGCTGCCGCGTTTAGTGGATTATGTGGGCGTAGTGGGATGGCAAGGGAGGGGGTGATATGGAGCCCCC
GGAGGTTGGGTGGACGGGTTGTGCGGAGTCCGGAGATGGCCGAAGGGTGGGCGACGGTGAAGGGCATGAGATTGGTTGTGGAGATGGGTCTGTTCCCACTAATGCTGGAG
ACTGGTTCCAGTCGAGTGGCTGGCGCTTTGCAGGATGAGGCAGTGGATGATTTTTCGGATCTGGGTGCGCTAGCGGTCGATCTACGGAAGGATATATCAGCGTCTTCCCT
TGCCAGGTGTATGTTTACTCGAAGAGAGAGGAATGGTGTGGTGCATCAGTTGGCTTGTTTGGCGTTGAGGGAGGAAGAATCGATGGTGTGGATGGAATATGTACCTCAGT
GTTTTGAGGCGTTGGTTTTTTTTATATGGCATTGTTGTAATGTTTTGCAAGTATGTGTTAGAGCTCGAACGTTTCAAGGTCAGGAAGGGCAAAGAGAACAAGGAATTCCT
TATGTCAGAAAGGGAGGTCAACCTGAGCAGTTACAGTCACCACTCCAACCGTTGTGCCGGAAATCGGGGGAGATTGAGGTCATGCACCTGAGTAGTGGATCTGTTTTGAG
CAGAATTGAAATTTGCCTAAACTATGAGCTCGGGAGGCAAGACGAGGTGAAAATGAGCGAGTACGAAGCATACGTGCAGCTAGCTTTGTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGCTTTCGATTGCCAATGAATTGTTATGGTGGGATGGACTCCAAGGACCTGGAGATTTTCAATCAGACATTGTGGGCAAAGCAGTGCTGGAGAATTGTACAGCA
TCAGTCCTCCTTTTTAGCATGTGTGCTAAAGGGCAGATGTCATCCTTTCATAGATTTCTTGAGGGCGGAGGTGGGTTCGAGGCTGTCTTTTATTTGGAGGAGCCTGCTGT
GGGGGAGAGAGCTTCTAAAGAAGGGATTACGTCGGCGGATAGGGAATGGGGAAGTGGTTCCAGTGTATGAAGCGAATTGGATTCCTGATGATGGTGGTCTCAGAGTGCGG
TCACCAGTGACTTTGGCCCCTGAGACTCGGGTAGCTGATTTGATTACTAGGTCTGGGCAGTGGAACGAACAGCTCATTCGGCAACATTTTAGTCCCCACGAGTTCCCGTC
ATCCTCCTCGGATGAGTCGATTATGGGTTGGTGGATGGGGTGTTGGAGGATGTTGATTCCGAATAAGGTTAAGATATTCTTATGGAGACTCTGTTTAGATTGCCTGCCTA
CAATTAATAATTTGAGTTTTCGCGACGTGGATGTGTTAAATGTGTGTAGCCTTTGTGGCCAGCATGGTGAATCTAGCTTGCATGTCTTTTGGCATTGTAAGTTTGTTAGA
AGGGTTTTGAGGGATTCTGAGTTTGGGATCTTGGTACACGACGTGCAGGCATGGTCTATTTTTAATCTCCTTAGGGAGCGGAAATTTAAGGGGTTTAAACCAGTGATGGG
ACTAGTGGAGTGGACGGTGAGTTATATCTCACCGTTTCAACAGGCTGCCGCGTTTAGTGGATTATGTGGGCGTAGTGGGATGGCAAGGGAGGGGGTGATATGGAGCCCCC
GGAGGTTGGGTGGACGGGTTGTGCGGAGTCCGGAGATGGCCGAAGGGTGGGCGACGGTGAAGGGCATGAGATTGGTTGTGGAGATGGGTCTGTTCCCACTAATGCTGGAG
ACTGGTTCCAGTCGAGTGGCTGGCGCTTTGCAGGATGAGGCAGTGGATGATTTTTCGGATCTGGGTGCGCTAGCGGTCGATCTACGGAAGGATATATCAGCGTCTTCCCT
TGCCAGGTGTATGTTTACTCGAAGAGAGAGGAATGGTGTGGTGCATCAGTTGGCTTGTTTGGCGTTGAGGGAGGAAGAATCGATGGTGTGGATGGAATATGTACCTCAGT
GTTTTGAGGCGTTGGTTTTTTTTATATGGCATTGTTGTAATGTTTTGCAAGTATGTGTTAGAGCTCGAACGTTTCAAGGTCAGGAAGGGCAAAGAGAACAAGGAATTCCT
TATGTCAGAAAGGGAGGTCAACCTGAGCAGTTACAGTCACCACTCCAACCGTTGTGCCGGAAATCGGGGGAGATTGAGGTCATGCACCTGAGTAGTGGATCTGTTTTGAG
CAGAATTGAAATTTGCCTAAACTATGAGCTCGGGAGGCAAGACGAGGTGAAAATGAGCGAGTACGAAGCATACGTGCAGCTAGCTTTGTGTTGA
Protein sequenceShow/hide protein sequence
MNCFRLPMNCYGGMDSKDLEIFNQTLWAKQCWRIVQHQSSFLACVLKGRCHPFIDFLRAEVGSRLSFIWRSLLWGRELLKKGLRRRIGNGEVVPVYEANWIPDDGGLRVR
SPVTLAPETRVADLITRSGQWNEQLIRQHFSPHEFPSSSSDESIMGWWMGCWRMLIPNKVKIFLWRLCLDCLPTINNLSFRDVDVLNVCSLCGQHGESSLHVFWHCKFVR
RVLRDSEFGILVHDVQAWSIFNLLRERKFKGFKPVMGLVEWTVSYISPFQQAAAFSGLCGRSGMAREGVIWSPRRLGGRVVRSPEMAEGWATVKGMRLVVEMGLFPLMLE
TGSSRVAGALQDEAVDDFSDLGALAVDLRKDISASSLARCMFTRRERNGVVHQLACLALREEESMVWMEYVPQCFEALVFFIWHCCNVLQVCVRARTFQGQEGQREQGIP
YVRKGGQPEQLQSPLQPLCRKSGEIEVMHLSSGSVLSRIEICLNYELGRQDEVKMSEYEAYVQLALC