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Lag0022028 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022028
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr7:16300292..16301114
RNA-Seq ExpressionLag0022028
SyntenyLag0022028
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]8.0e-0631.13Show/hide
Query:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQT-------QEENLNHQEHRDST---------------
        MA NS+QW SERS  KK VAG++EID +S+L+AQ+ +L NA  K SG G++ S E  AA  + +       Q +  +H   + S+               
Subjt:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQT-------QEENLNHQEHRDST---------------

Query:  -----------------------------GTTGKCFNTMNKGKSPAEQEKSSLEYCKAVSVHHEEETQVAEEKE-------TTETEELAGDVEEGTTSNE
                                     G      NTM KGK P++ E    E+CKAV++   +E Q  E+K+       T E E     V+E T + +
Subjt:  -----------------------------GTTGKCFNTMNKGKSPAEQEKSSLEYCKAVSVHHEEETQVAEEKE-------TTETEELAGDVEEGTTSNE

Query:  AEKLIPKPSIPS
        A+K  P  SI S
Subjt:  AEKLIPKPSIPS
XP_022843226.1 uncharacterized protein LOC111366761 [Olea europaea var. sylvestris]1.8e-0545.21Show/hide
Query:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQTQEENLNHQE
        +ATNSYQW SERSG KK VAG+ E+D I+AL AQ++SL N  +  +  G+ Q+++S  + +S  QE  + +++
Subjt:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQTQEENLNHQE
XP_022868533.1 uncharacterized protein LOC111388104 [Olea europaea var. sylvestris]1.1e-0546.58Show/hide
Query:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQTQEENLNHQE
        +ATNSYQW SERSG KK VAG+ E+D I+AL AQ+SSL N  +  +  G+ Q ++S  + +S  QE  + +++
Subjt:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQTQEENLNHQE
XP_022868848.1 uncharacterized protein LOC111388394 [Olea europaea var. sylvestris]1.1e-0545.21Show/hide
Query:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQTQEENLNHQE
        +ATNSYQW SERSG KK VAG+ E+D I+AL AQ++SL N  +  +  G+ Q ++S  + +S  QE  + +++
Subjt:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQTQEENLNHQE
XP_022881095.1 uncharacterized protein LOC111398428 [Olea europaea var. sylvestris]1.4e-0543.3Show/hide
Query:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQTQEENLNHQEHRDSTGTTGKCFNTMNK-GKSPAE
        +ATN+YQWSSERSG KK VAG+ E+D I+AL AQ++SL N  +  +  G+ Q ++S  + +S  QE  + +     +T      FNT N  GK P E
Subjt:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQTQEENLNHQEHRDSTGTTGKCFNTMNK-GKSPAE
TrEMBL top hitse value%identityAlignment
A0A6J1DU19 uncharacterized protein LOC1110243613.9e-0631.13Show/hide
Query:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQT-------QEENLNHQEHRDST---------------
        MA NS+QW SERS  KK VAG++EID +S+L+AQ+ +L NA  K SG G++ S E  AA  + +       Q +  +H   + S+               
Subjt:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQT-------QEENLNHQEHRDST---------------

Query:  -----------------------------GTTGKCFNTMNKGKSPAEQEKSSLEYCKAVSVHHEEETQVAEEKE-------TTETEELAGDVEEGTTSNE
                                     G      NTM KGK P++ E    E+CKAV++   +E Q  E+K+       T E E     V+E T + +
Subjt:  -----------------------------GTTGKCFNTMNKGKSPAEQEKSSLEYCKAVSVHHEEETQVAEEKE-------TTETEELAGDVEEGTTSNE

Query:  AEKLIPKPSIPS
        A+K  P  SI S
Subjt:  AEKLIPKPSIPS
U5CUI2 Retrotrans_gag domain-containing protein6.2e-0448.39Show/hide
Query:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALAS
        +A+N+YQWS+ R+   + VAGV E+D I+AL AQM+S+ N  LK    G+A++I+ AAA+ S
Subjt:  MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCAACAGCTATCAGTGGTCATCTGAGCGGTCGGGACCGAAAAAGATTGTTGCTGGAGTGTTCGAGATTGACAACATAAGTGCACTTCAGGCCCAAATGTCTTC
CCTTGCTAATGCATTTTTAAAGTTTTCAGGTACAGGGAGTGCTCAATCAATTGAGTCTGCAGCTGCCCTTGCATCCCAGACTCAGGAGGAAAATCTCAACCATCAAGAAC
ATAGAGACTCAACTGGGACAACTGGTAAGTGTTTCAATACCATGAATAAAGGTAAATCCCCAGCTGAACAGGAGAAATCTTCATTGGAGTACTGCAAGGCCGTCTCTGTG
CATCACGAGGAAGAGACTCAAGTAGCTGAGGAGAAGGAGACTACTGAAACTGAGGAACTCGCTGGAGATGTTGAGGAGGGCACTACCTCAAATGAAGCTGAAAAGCTTAT
ACCTAAGCCCTCTATCCCTTCTCCTATAGTTTTAGTTCCTAAGTCAAAGAATAAGAAAAAGAAAAATTCTAAGGCCAATTTAATCAGTTTCTTGATGCTTTTACAGGGTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCAACAGCTATCAGTGGTCATCTGAGCGGTCGGGACCGAAAAAGATTGTTGCTGGAGTGTTCGAGATTGACAACATAAGTGCACTTCAGGCCCAAATGTCTTC
CCTTGCTAATGCATTTTTAAAGTTTTCAGGTACAGGGAGTGCTCAATCAATTGAGTCTGCAGCTGCCCTTGCATCCCAGACTCAGGAGGAAAATCTCAACCATCAAGAAC
ATAGAGACTCAACTGGGACAACTGGTAAGTGTTTCAATACCATGAATAAAGGTAAATCCCCAGCTGAACAGGAGAAATCTTCATTGGAGTACTGCAAGGCCGTCTCTGTG
CATCACGAGGAAGAGACTCAAGTAGCTGAGGAGAAGGAGACTACTGAAACTGAGGAACTCGCTGGAGATGTTGAGGAGGGCACTACCTCAAATGAAGCTGAAAAGCTTAT
ACCTAAGCCCTCTATCCCTTCTCCTATAGTTTTAGTTCCTAAGTCAAAGAATAAGAAAAAGAAAAATTCTAAGGCCAATTTAATCAGTTTCTTGATGCTTTTACAGGGTT
GA
Protein sequenceShow/hide protein sequence
MATNSYQWSSERSGPKKIVAGVFEIDNISALQAQMSSLANAFLKFSGTGSAQSIESAAALASQTQEENLNHQEHRDSTGTTGKCFNTMNKGKSPAEQEKSSLEYCKAVSV
HHEEETQVAEEKETTETEELAGDVEEGTTSNEAEKLIPKPSIPSPIVLVPKSKNKKKKNSKANLISFLMLLQG