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Lag0022030 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022030
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr7:16425793..16427293
RNA-Seq ExpressionLag0022030
SyntenyLag0022030
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48538.1 hypothetical protein EZV62_024413 [Acer yangbiense]9.3e-0951.39Show/hide
Query:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR
        ++TKF+ E+F GKGDF + +KKMK +LVQQK  KAL ++ + P  +  E+  D+ + A++TIIL LADNVLR
Subjt:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR

TXG70425.1 hypothetical protein EZV62_005360 [Acer yangbiense]1.6e-0851.43Show/hide
Query:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNV
        ++TKFE E+F GKGDF + +KKMK +LVQQK AK+L ++ + P  +  E+  D+ + A+NTIIL LADN+
Subjt:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNV

TXG73199.1 hypothetical protein EZV62_001778 [Acer yangbiense]4.6e-0848.61Show/hide
Query:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR
        M+ KFE ++F G GDF + ++K+K LL QQK+ KA+   D+ P+ + DE  +DM ++A  TIIL L+DNVLR
Subjt:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR

XP_022157854.1 uncharacterized protein LOC111024471 isoform X1 [Momordica charantia]7.6e-1161.11Show/hide
Query:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR
        M  KFE E F GKGDF+L KKKMK LLVQQKVAKAL D  +       E+  ++Q+IAF++IIL+LADNVLR
Subjt:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR

XP_022157856.1 uncharacterized protein LOC111024471 isoform X3 [Momordica charantia]7.6e-1161.11Show/hide
Query:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR
        M  KFE E F GKGDF+L KKKMK LLVQQKVAKAL D  +       E+  ++Q+IAF++IIL+LADNVLR
Subjt:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR

TrEMBL top hitse value%identityAlignment
A0A5C7GV29 Uncharacterized protein4.5e-0951.39Show/hide
Query:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR
        ++TKF+ E+F GKGDF + +KKMK +LVQQK  KAL ++ + P  +  E+  D+ + A++TIIL LADNVLR
Subjt:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR

A0A5C7IML8 gag_pre-integrs domain-containing protein7.7e-0951.43Show/hide
Query:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNV
        ++TKFE E+F GKGDF + +KKMK +LVQQK AK+L ++ + P  +  E+  D+ + A+NTIIL LADN+
Subjt:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNV

A0A5C7IVV0 gag_pre-integrs domain-containing protein2.2e-0848.61Show/hide
Query:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR
        M+ KFE ++F G GDF + ++K+K LL QQK+ KA+   D+ P+ + DE  +DM ++A  TIIL L+DNVLR
Subjt:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR

A0A6J1DXR5 uncharacterized protein LOC111024471 isoform X13.7e-1161.11Show/hide
Query:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR
        M  KFE E F GKGDF+L KKKMK LLVQQKVAKAL D  +       E+  ++Q+IAF++IIL+LADNVLR
Subjt:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR

A0A6J1DZD8 uncharacterized protein LOC111024471 isoform X33.7e-1161.11Show/hide
Query:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR
        M  KFE E F GKGDF+L KKKMK LLVQQKVAKAL D  +       E+  ++Q+IAF++IIL+LADNVLR
Subjt:  MTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVLR

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-0436.76Show/hide
Query:  KFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVL
        K+E  +F G   F+  +++M+DLL+QQ + K L    +KP+ M  E +AD+ + A + I L+L+D+V+
Subjt:  KFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADMQKIAFNTIILYLADNVL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTGGATGAAGATCTCAGGTTGGGAAAAAGGCTTTGTCAAGCAGGGGAGGAGGTGGGATTGCTGGAAAGTTTACCTGAAACTCAGAAGAAGAGGAGCAAGGTTGA
TGTAGGAGTGATCATAGTTGAAGAGAGAGCGGCGAGCCCTGGCTTCTTTTTCGATAAGATGACTACTAAGTTTGAGGGTGAGAGGTTTGTTGGAAAAGGGGACTTTGCCT
TGTGCAAAAAGAAGATGAAAGACCTATTGGTACAACAAAAGGTTGCTAAAGCTCTGAGTGATAAAGATGAAAAGCCGGAGCAAATGATGGATGAACAATATGCTGATATG
CAGAAAATAGCTTTCAACACTATAATCCTATATTTAGCAGATAATGTCTTACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTGGATGAAGATCTCAGGTTGGGAAAAAGGCTTTGTCAAGCAGGGGAGGAGGTGGGATTGCTGGAAAGTTTACCTGAAACTCAGAAGAAGAGGAGCAAGGTTGA
TGTAGGAGTGATCATAGTTGAAGAGAGAGCGGCGAGCCCTGGCTTCTTTTTCGATAAGATGACTACTAAGTTTGAGGGTGAGAGGTTTGTTGGAAAAGGGGACTTTGCCT
TGTGCAAAAAGAAGATGAAAGACCTATTGGTACAACAAAAGGTTGCTAAAGCTCTGAGTGATAAAGATGAAAAGCCGGAGCAAATGATGGATGAACAATATGCTGATATG
CAGAAAATAGCTTTCAACACTATAATCCTATATTTAGCAGATAATGTCTTACGATAG
Protein sequenceShow/hide protein sequence
MGLDEDLRLGKRLCQAGEEVGLLESLPETQKKRSKVDVGVIIVEERAASPGFFFDKMTTKFEGERFVGKGDFALCKKKMKDLLVQQKVAKALSDKDEKPEQMMDEQYADM
QKIAFNTIILYLADNVLR