; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022049 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022049
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:16977300..16977731
RNA-Seq ExpressionLag0022049
SyntenyLag0022049
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.1e-2339.44Show/hide
Query:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD
        M+++ + W+ +  T+ E           +  A+++++C+V K+ + KR + +A RSVM+SVWRVH S R +  G N+++I FKSL ++ RVL  GPWTF+
Subjt:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD

Query:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMA
        +SL+VL     ++Q  D+ FNF +FWI+I N+   C++ EMA
Subjt:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMA

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]8.2e-2239.16Show/hide
Query:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD
        M+++ E W+ + LT  +       +   L   E+++   VGK+ + KR +++AFRSVM+S+W+VH S  I++AG N+++I FKS+ ++ RVL  GPW+F+
Subjt:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD

Query:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK
         SL+VL     +DQ  D+ FNF + WI+I  +   CM  +MAK
Subjt:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.3e-2437.06Show/hide
Query:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD
        M+D+ + W+ + L   E       N   +   ++I++C VGK+   KR  ++AF SVM+ VW++H S RI++AG N+++I FK++ +++RV  +GPWTFD
Subjt:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD

Query:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK
        +SL++LVP   +++  D++ +  +FW++I  +   CMT +MAK
Subjt:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]7.9e-2541.26Show/hide
Query:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD
        M+++ E W+ +NLT+ E   F   N   +  AE+I++C VGK+ + KR +  A  SVM+ VW++H S RI++AG N+++I FK+++++ RVL  GPWTFD
Subjt:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD

Query:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK
        +SL VLV    +D+  D++F F +FW++I  +    +T +MAK
Subjt:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK

XP_042939610.1 uncharacterized protein LOC122274661 [Carya illinoinensis]6.9e-2139.86Show/hide
Query:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVHS-PRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD
        M++L +RW+K NL+  E ++F   N      +   + C++GKV+S K  N +AFRS M  VWR+    R    G+  FLIEF+ L D+ +VL   PW FD
Subjt:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVHS-PRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD

Query:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMT
        R L+ L+ +NES  I  L+F F  FW+++ N+ +  MT
Subjt:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMT

TrEMBL top hitse value%identityAlignment
A0A5C7HVE7 Uncharacterized protein8.2e-2042.98Show/hide
Query:  LSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVHSPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFDRSLVVLVPLNESDQIGDLEFNFASFWIKI
        +   + +E+CLVGK++S K  N DAFR+VM  +WR     I+   +N FL  F+S  DR RVL  GPW+FD SL+V+  LN   +IG ++F    FW++I
Subjt:  LSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVHSPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFDRSLVVLVPLNESDQIGDLEFNFASFWIKI

Query:  LNMLVNCMTVEMAK
         N  + CMT E+ +
Subjt:  LNMLVNCMTVEMAK

A0A6J1D765 uncharacterized protein LOC1110179025.5e-2439.44Show/hide
Query:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD
        M+++ + W+ +  T+ E           +  A+++++C+V K+ + KR + +A RSVM+SVWRVH S R +  G N+++I FKSL ++ RVL  GPWTF+
Subjt:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD

Query:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMA
        +SL+VL     ++Q  D+ FNF +FWI+I N+   C++ EMA
Subjt:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMA

A0A6J1DP89 uncharacterized protein LOC1110229324.0e-2239.16Show/hide
Query:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD
        M+++ E W+ + LT  +       +   L   E+++   VGK+ + KR +++AFRSVM+S+W+VH S  I++AG N+++I FKS+ ++ RVL  GPW+F+
Subjt:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD

Query:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK
         SL+VL     +DQ  D+ FNF + WI+I  +   CM  +MAK
Subjt:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK

A0A6J1DVS4 uncharacterized protein LOC1110235556.5e-2537.06Show/hide
Query:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD
        M+D+ + W+ + L   E       N   +   ++I++C VGK+   KR  ++AF SVM+ VW++H S RI++AG N+++I FK++ +++RV  +GPWTFD
Subjt:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD

Query:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK
        +SL++LVP   +++  D++ +  +FW++I  +   CMT +MAK
Subjt:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK

A0A6J1DYG3 uncharacterized protein LOC1110246763.8e-2541.26Show/hide
Query:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD
        M+++ E W+ +NLT+ E   F   N   +  AE+I++C VGK+ + KR +  A  SVM+ VW++H S RI++AG N+++I FK+++++ RVL  GPWTFD
Subjt:  MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVH-SPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFD

Query:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK
        +SL VLV    +D+  D++F F +FW++I  +    +T +MAK
Subjt:  RSLVVLVPLNESDQIGDLEFNFASFWIKILNMLVNCMTVEMAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACTTGTTGGAACGATGGAAGAAATGGAATTTGACGGATTGTGAAGGACGATTGTTTGAGGCGGTGAACAGTAACCTGTTAAGCAAGGCAGAAGATATTGAAAT
GTGCCTAGTGGGAAAAGTGATGTCTCATAAGAGAGCCAACCTCGATGCATTCAGATCAGTTATGCGATCTGTTTGGAGAGTTCATTCTCCGCGGATTGACTCGGCAGGTG
AAAACGTCTTTCTTATTGAGTTTAAATCACTGATGGATAGAGTGAGAGTTTTGAGAATGGGGCCATGGACTTTTGATAGATCCTTAGTGGTATTGGTTCCATTGAATGAG
AGCGATCAAATTGGGGATTTGGAATTCAACTTTGCATCTTTTTGGATTAAAATTCTTAATATGCTAGTGAATTGTATGACTGTTGAGATGGCAAAATGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACTTGTTGGAACGATGGAAGAAATGGAATTTGACGGATTGTGAAGGACGATTGTTTGAGGCGGTGAACAGTAACCTGTTAAGCAAGGCAGAAGATATTGAAAT
GTGCCTAGTGGGAAAAGTGATGTCTCATAAGAGAGCCAACCTCGATGCATTCAGATCAGTTATGCGATCTGTTTGGAGAGTTCATTCTCCGCGGATTGACTCGGCAGGTG
AAAACGTCTTTCTTATTGAGTTTAAATCACTGATGGATAGAGTGAGAGTTTTGAGAATGGGGCCATGGACTTTTGATAGATCCTTAGTGGTATTGGTTCCATTGAATGAG
AGCGATCAAATTGGGGATTTGGAATTCAACTTTGCATCTTTTTGGATTAAAATTCTTAATATGCTAGTGAATTGTATGACTGTTGAGATGGCAAAATGTTAG
Protein sequenceShow/hide protein sequence
MEDLLERWKKWNLTDCEGRLFEAVNSNLLSKAEDIEMCLVGKVMSHKRANLDAFRSVMRSVWRVHSPRIDSAGENVFLIEFKSLMDRVRVLRMGPWTFDRSLVVLVPLNE
SDQIGDLEFNFASFWIKILNMLVNCMTVEMAKC