; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022050 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022050
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr7:16995335..17001948
RNA-Seq ExpressionLag0022050
SyntenyLag0022050
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-4348.8Show/hide
Query:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK
        T NT+L++D+LRFVL E+CP  P   NAT+ +R+ ++ W KANEKAR YIL SLSEVLAK+HE M TAREIM+SLQEMFGQ SYQ+ HDALKY+YN+ M 
Subjt:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK

Query:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE
        EGA +REHVL+MMV FN+AE NGAVIDE SQV                                              +GEANVA S RKF   S+S T+
Subjt:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE

Query:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH
        ++ SSS   KK ++ KG      GQ   KA + A K  KK  + K  C H
Subjt:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-4348.8Show/hide
Query:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK
        T NT+L++D+LRFVL E+CP  P   NAT+ +R+ ++ W KANEKAR YIL SLSEVLAK+HE M TAREIM+SLQEMFGQ SYQ+ HDALKY+YN+ M 
Subjt:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK

Query:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE
        EGA +REHVL+MMV FN+AE NGAVIDE SQV                                              +GEANVA S RKF   S+S T+
Subjt:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE

Query:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH
        ++ SSS   KK ++ KG      GQ   KA + A K  KK  + K  C H
Subjt:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH

KAA0060254.1 gag/pol protein [Cucumis melo var. makuwa]5.7e-4757.56Show/hide
Query:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK
        T N +L++D+L+FVL E+CP  P   NATQ +R+ ++ W K NEK R YIL SLSEVLAK+HE M TAREIM+SLQEMFGQ SYQ++HDALKY+YN+ M 
Subjt:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK

Query:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQ-VEGEANVAQSKRKFENDSSSETETVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEK
        EGA +REHVL+MMV FN+AE NGAVIDE SQ  +GEANVA S RKF   S+S T+++ SSS   KK ++ KG      GQ   KA + A K  KK  + K
Subjt:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQ-VEGEANVAQSKRKFENDSSSETETVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEK

Query:  YRCSH
          C H
Subjt:  YRCSH

TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa]5.7e-4757.56Show/hide
Query:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK
        T N +L++D+L+FVL E+CP  P   NATQ +R+ ++ W K NEK R YIL SLSEVLAK+HE M TAREIM+SLQEMFGQ SYQ++HDALKY+YN+ M 
Subjt:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK

Query:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQ-VEGEANVAQSKRKFENDSSSETETVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEK
        EGA +REHVL+MMV FN+AE NGAVIDE SQ  +GEANVA S RKF   S+S T+++ SSS   KK ++ KG      GQ   KA + A K  KK  + K
Subjt:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQ-VEGEANVAQSKRKFENDSSSETETVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEK

Query:  YRCSH
          C H
Subjt:  YRCSH

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-4348.8Show/hide
Query:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK
        T NT+L++D+LRFVL E+CP  P   NAT+ +R+ ++ W KANEKAR YIL SLSEVLAK+HE M TAREIM+SLQEMFGQ SYQ+ HDALKY+YN+ M 
Subjt:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK

Query:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE
        EGA +REHVL+MMV FN+AE NGAVIDE SQV                                              +GEANVA S RKF   S+S T+
Subjt:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE

Query:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH
        ++ SSS   KK ++ KG      GQ   KA + A K  KK  + K  C H
Subjt:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein6.4e-4448.8Show/hide
Query:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK
        T NT+L++D+LRFVL E+CP  P   NAT+ +R+ ++ W KANEKAR YIL SLSEVLAK+HE M TAREIM+SLQEMFGQ SYQ+ HDALKY+YN+ M 
Subjt:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK

Query:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE
        EGA +REHVL+MMV FN+AE NGAVIDE SQV                                              +GEANVA S RKF   S+S T+
Subjt:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE

Query:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH
        ++ SSS   KK ++ KG      GQ   KA + A K  KK  + K  C H
Subjt:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH

A0A5A7TU93 Gag/pol protein6.4e-4448.8Show/hide
Query:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK
        T NT+L++D+LRFVL E+CP  P   NAT+ +R+ ++ W KANEKAR YIL SLSEVLAK+HE M TAREIM+SLQEMFGQ SYQ+ HDALKY+YN+ M 
Subjt:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK

Query:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE
        EGA +REHVL+MMV FN+AE NGAVIDE SQV                                              +GEANVA S RKF   S+S T+
Subjt:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE

Query:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH
        ++ SSS   KK ++ KG      GQ   KA + A K  KK  + K  C H
Subjt:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH

A0A5A7UYX7 Gag/pol protein2.8e-4757.56Show/hide
Query:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK
        T N +L++D+L+FVL E+CP  P   NATQ +R+ ++ W K NEK R YIL SLSEVLAK+HE M TAREIM+SLQEMFGQ SYQ++HDALKY+YN+ M 
Subjt:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK

Query:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQ-VEGEANVAQSKRKFENDSSSETETVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEK
        EGA +REHVL+MMV FN+AE NGAVIDE SQ  +GEANVA S RKF   S+S T+++ SSS   KK ++ KG      GQ   KA + A K  KK  + K
Subjt:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQ-VEGEANVAQSKRKFENDSSSETETVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEK

Query:  YRCSH
          C H
Subjt:  YRCSH

A0A5D3BHG7 Gag/pol protein2.8e-4757.56Show/hide
Query:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK
        T N +L++D+L+FVL E+CP  P   NATQ +R+ ++ W K NEK R YIL SLSEVLAK+HE M TAREIM+SLQEMFGQ SYQ++HDALKY+YN+ M 
Subjt:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK

Query:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQ-VEGEANVAQSKRKFENDSSSETETVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEK
        EGA +REHVL+MMV FN+AE NGAVIDE SQ  +GEANVA S RKF   S+S T+++ SSS   KK ++ KG      GQ   KA + A K  KK  + K
Subjt:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQ-VEGEANVAQSKRKFENDSSSETETVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEK

Query:  YRCSH
          C H
Subjt:  YRCSH

A0A5D3CPJ6 Gag/pol protein6.4e-4448.8Show/hide
Query:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK
        T NT+L++D+LRFVL E+CP  P   NAT+ +R+ ++ W KANEKAR YIL SLSEVLAK+HE M TAREIM+SLQEMFGQ SYQ+ HDALKY+YN+ M 
Subjt:  TWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQLHHDALKYVYNSYMK

Query:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE
        EGA +REHVL+MMV FN+AE NGAVIDE SQV                                              +GEANVA S RKF   S+S T+
Subjt:  EGAFIREHVLDMMVQFNIAEANGAVIDEHSQV----------------------------------------------EGEANVAQSKRKFENDSSSETE

Query:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH
        ++ SSS   KK ++ KG      GQ   KA + A K  KK  + K  C H
Subjt:  TVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKEVSEKYRCSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGGCTTCGTGTCGCCTTGGGTGTGGCCTCCCTTCGAAAAGTGTTTGCATGGATCAATAACAAGAAATCAAACTTGGAATACGATTCTTGTCGTCGATGAGTTACG
GTTTGTCTTAACGGAGGATTGTCCTCCGACCCCTACTGATCGTAATGCAACCCAAGCATTGAGGGATGCTCATGACTGCTGGACAAAAGCCAATGAAAAGGCCCGCGTCT
ACATCTTAACCAGCTTATCTGAAGTTTTGGCTAAGAGGCATGAGGGAATGGCTACAGCGAGAGAGATTATGAACTCTCTCCAAGAGATGTTTGGACAACCGTCCTATCAA
CTCCACCATGATGCTCTAAAATACGTTTATAACTCCTACATGAAAGAAGGTGCCTTTATTCGGGAACATGTCCTGGACATGATGGTCCAATTTAACATAGCGGAAGCGAA
TGGGGCGGTCATAGACGAGCACAGTCAAGTAGAAGGAGAGGCAAACGTTGCCCAATCCAAGAGAAAGTTCGAGAATGACTCATCTTCTGAGACTGAAACTGTAGCTTCTT
CTTCAAAAAAGATAAAGAAGACGAGAGAAGACAAGGGGAAGACTCCCACAGCTGCTGGTCAAAATAAAGGAAAAGCCAAGGTTGTGGCTGAAAAGAAGGAGAAAAAAGAA
GTCTCAGAGAAATACCGGTGTAGTCATAGTGGTGGTGTTCTCAAGACTTGGAGAAAAATTTCCAGCGAAGATCAAGGTACGTGGTTGCTGTATTTTCAAGAGAAGATTCA
ATGGTTTGGTGAAACCGTCAAGACTTCAACAAGAGAGGACCTAATGGACCTACAGATCAGAAGCTCCAATGATATGAGTCAGGAAGGAGTGAATTCCATCTTGTATGATT
ATGCTCCCAGCCACCAACTCGGTCTTGTCCCCAAAATGGTAGGCTTATTGAGTCGGCGAACTGGACACGCTCGTGCATACAAATCAAAGGACAATCCCTTGCAAACAAAA
AGGGGAAAGACATTAAAGAGAGAAATCGCACGCTCACCGGAAACTCATCCAAACGAAAACCCTTCGCGCGCGCGTCTTAGACGTTGTACTGCCCGTCGCCGTAGTCGCAC
GCTCATCGGAGAAAGACTGACGCCGACGCTGAGGATGAGGAACGAAGATGATGCTGGTTGGCCGACCGAAACAGGACACACAGAGAGAGCTAAGACACTCGGTTCGGTTG
TGAAGGAGGAAGGAATGGCCTGTTATGCGTGTGGCTCAAAGACAAGGAAAAGGAAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCGGCTTCGTGTCGCCTTGGGTGTGGCCTCCCTTCGAAAAGTGTTTGCATGGATCAATAACAAGAAATCAAACTTGGAATACGATTCTTGTCGTCGATGAGTTACG
GTTTGTCTTAACGGAGGATTGTCCTCCGACCCCTACTGATCGTAATGCAACCCAAGCATTGAGGGATGCTCATGACTGCTGGACAAAAGCCAATGAAAAGGCCCGCGTCT
ACATCTTAACCAGCTTATCTGAAGTTTTGGCTAAGAGGCATGAGGGAATGGCTACAGCGAGAGAGATTATGAACTCTCTCCAAGAGATGTTTGGACAACCGTCCTATCAA
CTCCACCATGATGCTCTAAAATACGTTTATAACTCCTACATGAAAGAAGGTGCCTTTATTCGGGAACATGTCCTGGACATGATGGTCCAATTTAACATAGCGGAAGCGAA
TGGGGCGGTCATAGACGAGCACAGTCAAGTAGAAGGAGAGGCAAACGTTGCCCAATCCAAGAGAAAGTTCGAGAATGACTCATCTTCTGAGACTGAAACTGTAGCTTCTT
CTTCAAAAAAGATAAAGAAGACGAGAGAAGACAAGGGGAAGACTCCCACAGCTGCTGGTCAAAATAAAGGAAAAGCCAAGGTTGTGGCTGAAAAGAAGGAGAAAAAAGAA
GTCTCAGAGAAATACCGGTGTAGTCATAGTGGTGGTGTTCTCAAGACTTGGAGAAAAATTTCCAGCGAAGATCAAGGTACGTGGTTGCTGTATTTTCAAGAGAAGATTCA
ATGGTTTGGTGAAACCGTCAAGACTTCAACAAGAGAGGACCTAATGGACCTACAGATCAGAAGCTCCAATGATATGAGTCAGGAAGGAGTGAATTCCATCTTGTATGATT
ATGCTCCCAGCCACCAACTCGGTCTTGTCCCCAAAATGGTAGGCTTATTGAGTCGGCGAACTGGACACGCTCGTGCATACAAATCAAAGGACAATCCCTTGCAAACAAAA
AGGGGAAAGACATTAAAGAGAGAAATCGCACGCTCACCGGAAACTCATCCAAACGAAAACCCTTCGCGCGCGCGTCTTAGACGTTGTACTGCCCGTCGCCGTAGTCGCAC
GCTCATCGGAGAAAGACTGACGCCGACGCTGAGGATGAGGAACGAAGATGATGCTGGTTGGCCGACCGAAACAGGACACACAGAGAGAGCTAAGACACTCGGTTCGGTTG
TGAAGGAGGAAGGAATGGCCTGTTATGCGTGTGGCTCAAAGACAAGGAAAAGGAAAGATTAG
Protein sequenceShow/hide protein sequence
MLGFVSPWVWPPFEKCLHGSITRNQTWNTILVVDELRFVLTEDCPPTPTDRNATQALRDAHDCWTKANEKARVYILTSLSEVLAKRHEGMATAREIMNSLQEMFGQPSYQ
LHHDALKYVYNSYMKEGAFIREHVLDMMVQFNIAEANGAVIDEHSQVEGEANVAQSKRKFENDSSSETETVASSSKKIKKTREDKGKTPTAAGQNKGKAKVVAEKKEKKE
VSEKYRCSHSGGVLKTWRKISSEDQGTWLLYFQEKIQWFGETVKTSTREDLMDLQIRSSNDMSQEGVNSILYDYAPSHQLGLVPKMVGLLSRRTGHARAYKSKDNPLQTK
RGKTLKREIARSPETHPNENPSRARLRRCTARRRSRTLIGERLTPTLRMRNEDDAGWPTETGHTERAKTLGSVVKEEGMACYACGSKTRKRKD