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Lag0022069 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022069
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:17290248..17292509
RNA-Seq ExpressionLag0022069
SyntenyLag0022069
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]2.2e-1241.84Show/hide
Query:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLT
        W  P  N WK+N+DASW E   VGGIGW++ D  G ++     KI  K EI  LE   I+ G++ +    +Q + P+ +ESDS+EVIR ++ +  DLT
Subjt:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLT

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]2.7e-1832.79Show/hide
Query:  PPTKLLSKAIEGSLVEWEENHLNRAGSG--------RLWNQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVL
        P T+ +  AI+  ++     + N  G          R     + A WK P +N WK+N++A+W      GGIGW++ D  G +I    + I ++  I  L
Subjt:  PPTKLLSKAIEGSLVEWEENHLNRAGSG--------RLWNQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVL

Query:  EAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA
        E  AI EG++A+   + +   P+ +ESDSLE I  L    +D TE+  ++EEI  M   +E     H +R+AN + H LAR+A
Subjt:  EAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]9.6e-1638.13Show/hide
Query:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTEL
        W+ P  + W +N+DASW +    GGIGW++   +G ++    + + +   +K+LEA AILEG++ + +  V R  PL IE+DS EV   L    EDLT+ 
Subjt:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTEL

Query:  KPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKATV
          VVEEIL +    E   F    R+ N   H LA++A+V
Subjt:  KPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKATV

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]3.0e-1737.5Show/hide
Query:  ALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTY---VQRK--IPLEIESDSLEVIRALRGD
        A WK P +N WK+N+DA+W      GGIGW++ D  G +I    + I ++  I  LE  AI EG++A+   +   +Q++   P+ +ESDSLE I  L   
Subjt:  ALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTY---VQRK--IPLEIESDSLEVIRALRGD

Query:  GEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA
         +D TE+  ++EEI  M   ++     H +R+AN + H LAR+A
Subjt:  GEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA

XP_030474454.1 uncharacterized protein LOC115691861 [Syzygium oleosum]2.2e-1230.57Show/hide
Query:  NQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGD
        N+    +W+ PR N  K+N+D S+V R  +G I  ++ D +  ++C  F +      I  LEA A+LEGIK   H   +R    E ESDSLEV+  +   
Subjt:  NQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGD

Query:  GEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKATVWCCSDQANPPS
         + L E+  ++ E+  +  RL +    H +  AN   +W+ +  T +      + PS
Subjt:  GEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKATVWCCSDQANPPS

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134121.3e-1832.79Show/hide
Query:  PPTKLLSKAIEGSLVEWEENHLNRAGSG--------RLWNQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVL
        P T+ +  AI+  ++     + N  G          R     + A WK P +N WK+N++A+W      GGIGW++ D  G +I    + I ++  I  L
Subjt:  PPTKLLSKAIEGSLVEWEENHLNRAGSG--------RLWNQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVL

Query:  EAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA
        E  AI EG++A+   + +   P+ +ESDSLE I  L    +D TE+  ++EEI  M   +E     H +R+AN + H LAR+A
Subjt:  EAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA

A0A6J1CQG0 uncharacterized protein LOC1110132161.1e-1241.84Show/hide
Query:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLT
        W  P  N WK+N+DASW E   VGGIGW++ D  G ++     KI  K EI  LE   I+ G++ +    +Q + P+ +ESDS+EVIR ++ +  DLT
Subjt:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLT

A0A6J1DNV9 uncharacterized protein LOC1110224034.7e-1638.13Show/hide
Query:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTEL
        W+ P  + W +N+DASW +    GGIGW++   +G ++    + + +   +K+LEA AILEG++ + +  V R  PL IE+DS EV   L    EDLT+ 
Subjt:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTEL

Query:  KPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKATV
          VVEEIL +    E   F    R+ N   H LA++A+V
Subjt:  KPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKATV

A0A6J1DSV1 uncharacterized protein LOC1110236081.4e-1737.5Show/hide
Query:  ALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTY---VQRK--IPLEIESDSLEVIRALRGD
        A WK P +N WK+N+DA+W      GGIGW++ D  G +I    + I ++  I  LE  AI EG++A+   +   +Q++   P+ +ESDSLE I  L   
Subjt:  ALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTY---VQRK--IPLEIESDSLEVIRALRGD

Query:  GEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA
         +D TE+  ++EEI  M   ++     H +R+AN + H LAR+A
Subjt:  GEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA

A0A7C9A7V4 Uncharacterized protein1.2e-1133.58Show/hide
Query:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTEL
        W+ PR    K+N DAS   RDG+ G+G VV D NG +  +  +   + WE++ +EA A+L G++  W         LE+E+DS +V  AL G  + L   
Subjt:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTEL

Query:  KPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA
           + + L + +R+    F   +R  N + H LAR A
Subjt:  KPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52990.1 thioredoxin family protein1.6e-0526.24Show/hide
Query:  KMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTELKPVVEEILC
        K N DAS  E D V G+GW++ +S G+++     K   +   +  E  A++  I+A    +   K+  E ++ +   +  L     D   LK  ++ I  
Subjt:  KMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTELKPVVEEILC

Query:  MSSRLESTIFVHCNRQANTIGHWLARKA----TVW----CC
              ST F+  +R+ N     L +KA    T W    CC
Subjt:  MSSRLESTIFVHCNRQANTIGHWLARKA----TVW----CC

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-0623.12Show/hide
Query:  KLLSKAIEGSLVEWE-ENHLNRAGSGRLWNQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIK
        ++L +A+E    EW     L    SG    +     WK P     K N+DA+W   +   GIGW++ + +G ++ +  + +     +   E +A+   + 
Subjt:  KLLSKAIEGSLVEWE-ENHLNRAGSGRLWNQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIK

Query:  AVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA
         +     +R I    ESD+  ++  L  D +    L+P +E+I  +    E   F    R  N +   +AR++
Subjt:  AVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA

AT3G23320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-0527.01Show/hide
Query:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTEL
        W+ P A   K N D S        G+ W++ +S G+ +     K   +  IK  E  A++  I+  W    +R   +E E D++ V R +R + E    L
Subjt:  WKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTEL

Query:  KPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA
        +  +E I   S    +  F   +R+ N     LA+KA
Subjt:  KPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA

AT4G29090.1 Ribonuclease H-like superfamily protein7.9e-0826.04Show/hide
Query:  EGSLVEWE-ENHLNRAGSGRLWNQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICL---RFQKISSKWEIKVLEAKAILEGIKAVWH
        E  L EW         G+    N+ S   W+ P     K N+DA+W   +   GIGWV+ +  G +  +      K+ S  E ++   +  +  +    +
Subjt:  EGSLVEWE-ENHLNRAGSGRLWNQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICL---RFQKISSKWEIKVLEAKAILEGIKAVWH

Query:  TYVQRKIPLEIESDSLEVIRALRGDGEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA
         YV        ESDS  +I  L  D E    LKP ++++  + S+     FV   R+ NT+   +AR++
Subjt:  TYVQRKIPLEIESDSLEVIRALRGDGEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-0523.46Show/hide
Query:  EWEENHL--NRAGSGRLWNQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKI
        EW +N +   +    R  +      W  P  +  K N DAS  ER+ V G+GW++ +S G++I     K   +   +  E   ++  I+A +    ++ I
Subjt:  EWEENHL--NRAGSGRLWNQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKAVWHTYVQRKI

Query:  PLEIESDSLEVIRALRGDGEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA
            E D+  + R +     +   L+  ++ I       ES  F   +R+ N    +LA++A
Subjt:  PLEIESDSLEVIRALRGDGEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGGCTCAGTACCAGTCCACCAACTAAGCTTTTATCTAAAGCTATTGAAGGTTCGTTGGTAGAGTGGGAAGAAAATCACCTGAATCGTGCCGGCTCAGGAAGATT
GTGGAACCAAGAGAGTCAAGCTCTGTGGAAGCTCCCGCGGGCGAATGGATGGAAGATGAACTCGGATGCGTCCTGGGTCGAAAGGGATGGCGTTGGGGGGATAGGTTGGG
TTGTGCATGACTCGAATGGGTCCCTAATCTGTCTTAGATTCCAGAAAATTTCGAGTAAATGGGAGATCAAAGTCTTAGAGGCCAAAGCAATTCTTGAAGGTATTAAAGCA
GTTTGGCATACCTATGTCCAGCGAAAGATCCCATTGGAGATTGAATCGGATTCTCTGGAGGTGATTCGAGCGTTGAGGGGAGATGGTGAAGACCTCACGGAGTTGAAACC
AGTGGTTGAAGAAATCCTTTGCATGTCTTCTCGGCTGGAATCGACGATTTTTGTACATTGTAATCGCCAAGCCAACACAATAGGCCACTGGTTGGCAAGGAAGGCGACGG
TTTGGTGTTGTTCCGATCAGGCGAATCCTCCTTCGAGGAATTGTGGGCCTAGGATTCGACACCTGACGGCCCCGACATTCCCCTGCGACTTGGCCACCTCACCATACTTG
TCTGAAACTGCTTCTAAGATTGAAGACTTTCCCCACAAACCAACACGAGGATCCCTCTCATTCGGATGTGATCTCGGTTCATTCATGTACCCCTCCTACGACCCCGACAT
TTCCCTGCGACCTGGCCACGTCACCATACTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGGCTCAGTACCAGTCCACCAACTAAGCTTTTATCTAAAGCTATTGAAGGTTCGTTGGTAGAGTGGGAAGAAAATCACCTGAATCGTGCCGGCTCAGGAAGATT
GTGGAACCAAGAGAGTCAAGCTCTGTGGAAGCTCCCGCGGGCGAATGGATGGAAGATGAACTCGGATGCGTCCTGGGTCGAAAGGGATGGCGTTGGGGGGATAGGTTGGG
TTGTGCATGACTCGAATGGGTCCCTAATCTGTCTTAGATTCCAGAAAATTTCGAGTAAATGGGAGATCAAAGTCTTAGAGGCCAAAGCAATTCTTGAAGGTATTAAAGCA
GTTTGGCATACCTATGTCCAGCGAAAGATCCCATTGGAGATTGAATCGGATTCTCTGGAGGTGATTCGAGCGTTGAGGGGAGATGGTGAAGACCTCACGGAGTTGAAACC
AGTGGTTGAAGAAATCCTTTGCATGTCTTCTCGGCTGGAATCGACGATTTTTGTACATTGTAATCGCCAAGCCAACACAATAGGCCACTGGTTGGCAAGGAAGGCGACGG
TTTGGTGTTGTTCCGATCAGGCGAATCCTCCTTCGAGGAATTGTGGGCCTAGGATTCGACACCTGACGGCCCCGACATTCCCCTGCGACTTGGCCACCTCACCATACTTG
TCTGAAACTGCTTCTAAGATTGAAGACTTTCCCCACAAACCAACACGAGGATCCCTCTCATTCGGATGTGATCTCGGTTCATTCATGTACCCCTCCTACGACCCCGACAT
TTCCCTGCGACCTGGCCACGTCACCATACTTGTCTGA
Protein sequenceShow/hide protein sequence
MSWLSTSPPTKLLSKAIEGSLVEWEENHLNRAGSGRLWNQESQALWKLPRANGWKMNSDASWVERDGVGGIGWVVHDSNGSLICLRFQKISSKWEIKVLEAKAILEGIKA
VWHTYVQRKIPLEIESDSLEVIRALRGDGEDLTELKPVVEEILCMSSRLESTIFVHCNRQANTIGHWLARKATVWCCSDQANPPSRNCGPRIRHLTAPTFPCDLATSPYL
SETASKIEDFPHKPTRGSLSFGCDLGSFMYPSYDPDISLRPGHVTILV