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Lag0022070 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022070
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr7:17296017..17296527
RNA-Seq ExpressionLag0022070
SyntenyLag0022070
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577099.1 hypothetical protein SDJN03_24673, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2871.91Show/hide
Query:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM
        LENIFDCIGCSDEQK++FA LRLKD A SWW +SKR L A G  V WEKFK+LFYKRYFP WLK+EK+ EL  L Q +RTV EYDEEF+
Subjt:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM

TYK16471.1 uncharacterized protein E5676_scaffold21G002740 [Cucumis melo var. makuwa]2.6e-2770Show/hide
Query:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFMK
        LENIFD I CSD+QK++FA LRLKD AFSWW +    L+A GV V WEKFKELF KRY P WLK EK+ ELCNLEQ D TVAEYDE+F+K
Subjt:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFMK

XP_022931358.1 uncharacterized protein LOC111437567 isoform X1 [Cucurbita moschata]1.8e-2871.91Show/hide
Query:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM
        LENIFDCIGCSDEQK++FA LRLKD A SWW +SKR L A G  V WEKFK+LFYKRYFP WLK+EK+ EL  L Q +RTV EYDEEF+
Subjt:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM

XP_022931360.1 uncharacterized protein LOC111437567 isoform X2 [Cucurbita moschata]1.8e-2871.91Show/hide
Query:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM
        LENIFDCIGCSDEQK++FA LRLKD A SWW +SKR L A G  V WEKFK+LFYKRYFP WLK+EK+ EL  L Q +RTV EYDEEF+
Subjt:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM

XP_023522569.1 uncharacterized protein LOC111786568 [Cucurbita pepo subsp. pepo]6.8e-2870.79Show/hide
Query:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM
        LENIFDCIGCSDEQ ++FA LRLKD A SWW +SKR L A G  V WEKFK+LFYKRYFP WLK+EK+ EL  L Q +RTV EYDEEF+
Subjt:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM

TrEMBL top hitse value%identityAlignment
A0A0A0L042 Retrotrans_gag domain-containing protein3.6e-2768.89Show/hide
Query:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFMK
        LENIFD I CSDE K++FA LRLKD AFSWW +    L+A GV V W+KFKELF KRY P WLK EK+ ELCNLEQ D TVAEYDE+F+K
Subjt:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFMK

A0A5A7TP79 Retrotrans_gag domain-containing protein6.2e-2768.89Show/hide
Query:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFMK
        LENIFD I CSD+QK++FA LRLKD AFSWW +    L+A GV V WEK KELF KRY P WLK EK+ ELCNLEQ D TVAEYDE+F+K
Subjt:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFMK

A0A5D3CX20 Retrotrans_gag domain-containing protein1.2e-2770Show/hide
Query:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFMK
        LENIFD I CSD+QK++FA LRLKD AFSWW +    L+A GV V WEKFKELF KRY P WLK EK+ ELCNLEQ D TVAEYDE+F+K
Subjt:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFMK

A0A6J1EYB6 uncharacterized protein LOC111437567 isoform X18.6e-2971.91Show/hide
Query:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM
        LENIFDCIGCSDEQK++FA LRLKD A SWW +SKR L A G  V WEKFK+LFYKRYFP WLK+EK+ EL  L Q +RTV EYDEEF+
Subjt:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM

A0A6J1EZ79 uncharacterized protein LOC111437567 isoform X28.6e-2971.91Show/hide
Query:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM
        LENIFDCIGCSDEQK++FA LRLKD A SWW +SKR L A G  V WEKFK+LFYKRYFP WLK+EK+ EL  L Q +RTV EYDEEF+
Subjt:  LENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLEQRDRTVAEYDEEFM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAATCAAAAGCAATTGTCACTACAAAAGAAGACCAACAACCACCCATCTGGGGATTTGGTAGATGTTTACCACGAAATTTGCACTGTAGTCCACGAAGGTTGGA
AAACATCTTTGATTGCATAGGTTGTTCAGATGAGCAAAAGATTGCTTTTGCTGGTTTAAGACTGAAAGATGTTGCATTTTCATGGTGGTCAATGTCAAAAAGAAAGTTGA
AAGCTAAGGGAGTTGAAGTGAAGTGGGAAAAGTTTAAGGAGTTATTCTATAAGAGATACTTCCCATGTTGGTTGAAATATGAAAAGTATACAGAACTTTGTAACTTGGAA
CAAAGAGATAGAACCGTAGCTGAGTATGATGAGGAGTTCATGAAGTACAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAATCAAAAGCAATTGTCACTACAAAAGAAGACCAACAACCACCCATCTGGGGATTTGGTAGATGTTTACCACGAAATTTGCACTGTAGTCCACGAAGGTTGGA
AAACATCTTTGATTGCATAGGTTGTTCAGATGAGCAAAAGATTGCTTTTGCTGGTTTAAGACTGAAAGATGTTGCATTTTCATGGTGGTCAATGTCAAAAAGAAAGTTGA
AAGCTAAGGGAGTTGAAGTGAAGTGGGAAAAGTTTAAGGAGTTATTCTATAAGAGATACTTCCCATGTTGGTTGAAATATGAAAAGTATACAGAACTTTGTAACTTGGAA
CAAAGAGATAGAACCGTAGCTGAGTATGATGAGGAGTTCATGAAGTACAGATGA
Protein sequenceShow/hide protein sequence
MVESKAIVTTKEDQQPPIWGFGRCLPRNLHCSPRRLENIFDCIGCSDEQKIAFAGLRLKDVAFSWWSMSKRKLKAKGVEVKWEKFKELFYKRYFPCWLKYEKYTELCNLE
QRDRTVAEYDEEFMKYR