; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022096 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022096
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpentatricopeptide repeat-containing protein At1g73400, mitochondrial isoform X1
Genome locationchr7:18294226..18294804
RNA-Seq ExpressionLag0022096
SyntenyLag0022096
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013419.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-1574.63Show/hide
Query:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYY-PPKFSPSIPAISGSITFLVHFNSEFVQ
        MN +CKRLLRV+NH PSSFR +NGRFS VSS I PSP Y  PKFS SIPA S SI FLVHFNSEFV+
Subjt:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYY-PPKFSPSIPAISGSITFLVHFNSEFVQ

XP_022138561.1 pentatricopeptide repeat-containing protein At1g73400, mitochondrial [Momordica charantia]2.0e-1573.02Show/hide
Query:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYYPPKFSPSIPAISGSITFLVHFNSE
        MNQICKRLLRV+N LPSSF   NG F +VSS I+P  +YPPKF+ SIPA SGSITFLVHF SE
Subjt:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYYPPKFSPSIPAISGSITFLVHFNSE

XP_022958744.1 pentatricopeptide repeat-containing protein At1g73400, mitochondrial isoform X1 [Cucurbita moschata]5.3e-1676.12Show/hide
Query:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSP-YYPPKFSPSIPAISGSITFLVHFNSEFVQ
        MN +CKRLLRV+NH PSSFR +NGRFS VSS I PSP YY PKFS SIPA S SI FLVHFNSEFV+
Subjt:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSP-YYPPKFSPSIPAISGSITFLVHFNSEFVQ

XP_023548130.1 pentatricopeptide repeat-containing protein At1g73400, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]9.0e-1674.63Show/hide
Query:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSP-YYPPKFSPSIPAISGSITFLVHFNSEFVQ
        MN +CKRL+RV+NH PSSFR +NGRFS VSS I PSP YY PKFS SIPA S SI FLVHFNSEFV+
Subjt:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSP-YYPPKFSPSIPAISGSITFLVHFNSEFVQ

XP_038874680.1 pentatricopeptide repeat-containing protein At1g73400, mitochondrial isoform X1 [Benincasa hispida]9.6e-1877.27Show/hide
Query:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYYPPKFSPSIPAISGSITFLVHFNSEFVQ
        MN+I KRLLRV+NH PSSFR INGR S VSS ILP+ YYPPKFS  IPA+SGSITFLV FNSEFV+
Subjt:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYYPPKFSPSIPAISGSITFLVHFNSEFVQ

TrEMBL top hitse value%identityAlignment
A0A1S3C5I6 pentatricopeptide repeat-containing protein At1g73400, mitochondrial isoform X12.8e-1569.7Show/hide
Query:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYYPPKFSPSIPAISGSITFLVHFNSEFVQ
        MN+I K LL+ +NH PSSFR INGR S VS  ILP  YYPPKFS SIP+ SGSITFLV FNS+FV+
Subjt:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYYPPKFSPSIPAISGSITFLVHFNSEFVQ

A0A5D3BPV0 Pentatricopeptide repeat-containing protein2.8e-1569.7Show/hide
Query:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYYPPKFSPSIPAISGSITFLVHFNSEFVQ
        MN+I K LL+ +NH PSSFR INGR S VS  ILP  YYPPKFS SIP+ SGSITFLV FNS+FV+
Subjt:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYYPPKFSPSIPAISGSITFLVHFNSEFVQ

A0A6J1CA28 pentatricopeptide repeat-containing protein At1g73400, mitochondrial9.7e-1673.02Show/hide
Query:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYYPPKFSPSIPAISGSITFLVHFNSE
        MNQICKRLLRV+N LPSSF   NG F +VSS I+P  +YPPKF+ SIPA SGSITFLVHF SE
Subjt:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYYPPKFSPSIPAISGSITFLVHFNSE

A0A6J1H3Y5 pentatricopeptide repeat-containing protein At1g73400, mitochondrial isoform X12.6e-1676.12Show/hide
Query:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSP-YYPPKFSPSIPAISGSITFLVHFNSEFVQ
        MN +CKRLLRV+NH PSSFR +NGRFS VSS I PSP YY PKFS SIPA S SI FLVHFNSEFV+
Subjt:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSP-YYPPKFSPSIPAISGSITFLVHFNSEFVQ

A0A6J1KVS8 pentatricopeptide repeat-containing protein At1g73400, mitochondrial isoform X13.1e-1473.13Show/hide
Query:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSP-YYPPKFSPSIPAISGSITFLVHFNSEFVQ
        MN + KRLLRV+NH PSSFR +NGRFS VSS I PSP YY PKFS SIPA S SI FLV FNSEFV+
Subjt:  MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSP-YYPPKFSPSIPAISGSITFLVHFNSEFVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAGATTTGCAAGCGCTTGCTTCGTGTTCAAAATCATCTTCCTTCATCATTCCGCCGCATCAATGGTCGTTTCTCGTTTGTAAGTTCTTGGATTCTACCATCTCC
ATATTACCCTCCCAAGTTCTCGCCCTCGATTCCCGCTATTTCGGGTTCGATTACGTTTTTGGTCCATTTTAATTCAGAATTTGTTCAATTACGGGTGAATGGTCGGGGGC
GTTCCAGATCCGGTTTTCGGGCTTCGACGAGTGGGTATCGCCGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTCGTGGGTATCATCGATCTGGTCGTGGGCATTGCAGATCTGGAGATCGAGGGTCATTCACGGGCGTCGTGG
GTCTTCGTGCGCAAGGAGGGACGAGGGAGAGAAAGAGGACGCCAGGGAGGGTCTTCGTGGGTCTTCATCGTGGCTGATTCAAGGTGGTGTTTGTGGGTTCTTCGCGCGTA
AGGAGGGTCTTCACCGTGGGTTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAGATTTGCAAGCGCTTGCTTCGTGTTCAAAATCATCTTCCTTCATCATTCCGCCGCATCAATGGTCGTTTCTCGTTTGTAAGTTCTTGGATTCTACCATCTCC
ATATTACCCTCCCAAGTTCTCGCCCTCGATTCCCGCTATTTCGGGTTCGATTACGTTTTTGGTCCATTTTAATTCAGAATTTGTTCAATTACGGGTGAATGGTCGGGGGC
GTTCCAGATCCGGTTTTCGGGCTTCGACGAGTGGGTATCGCCGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTCGTGGGTATCATCGATCTGGTCGTGGGCATTGCAGATCTGGAGATCGAGGGTCATTCACGGGCGTCGTGG
GTCTTCGTGCGCAAGGAGGGACGAGGGAGAGAAAGAGGACGCCAGGGAGGGTCTTCGTGGGTCTTCATCGTGGCTGATTCAAGGTGGTGTTTGTGGGTTCTTCGCGCGTA
AGGAGGGTCTTCACCGTGGGTTTTCTTGA
Protein sequenceShow/hide protein sequence
MNQICKRLLRVQNHLPSSFRRINGRFSFVSSWILPSPYYPPKFSPSIPAISGSITFLVHFNSEFVQLRVNGRGRSRSGFRASTSGYRRSXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXWSWVSSIWSWALQIWRSRVIHGRRGSSCARRDEGEKEDAREGLRGSSSWLIQGGVCGFFARKEGLHRGFS