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Lag0022103 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022103
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:18384870..18385394
RNA-Seq ExpressionLag0022103
SyntenyLag0022103
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]4.9e-2939.08Show/hide
Query:  GEVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRG
        G+V++E  G N F+  F  K  +N+V   G W F  +L+V E+PKG      L+F   DFWV  H++P +C  ++    L   IG+ VE  T E+ +  G
Subjt:  GEVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRG

Query:  KTLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECDVEEED----PNEKLKFG
        K +RVKV++DI  PL+R   I+ G   + + +   YERLPDFC+ CGR+GH V EC  E+        ++ KFG
Subjt:  KTLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECDVEEED----PNEKLKFG

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]4.0e-3138.6Show/hide
Query:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK
        EV +E  G NIF  +F+    + R+++ G W FD  LLV  E  G+    DL+FRYV FW+  HNLP  C  R+    LG  +G+  E +  E+G+  G+
Subjt:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK

Query:  TLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHEC--DVEEEDPNEKLKFG
         +R++V +D+ NPL+RG  +  G     + +   YERLP+FCY CG++GH+V +C  + +E   +   KFG
Subjt:  TLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHEC--DVEEEDPNEKLKFG

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]4.5e-3040.72Show/hide
Query:  IEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGKTLR
        ++  G NIFL  F     +NR+++ G W+FD AL++ + P   T   D++FR V  WVHF +L   C  +  AT LGNAIG F + E++ N    G  LR
Subjt:  IEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGKTLR

Query:  VKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHEC-DVEEEDPNEKLKFG
        V+VR D+  PL RG  +         WI   YERLPDF Y+CGRL HI+ +C D   +  ++ L++G
Subjt:  VKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHEC-DVEEEDPNEKLKFG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.1e-3144.23Show/hide
Query:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK
        ++ +E  G+N+FL  F  +   NRVMK G W FD AL+V ++P  + +  +LEF  V FW+H  +LP     +  A  LGNAIG FV+ + +E G   G 
Subjt:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK

Query:  TLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECD
        +LR++V +DI  PLRRG  I         WI   YERLPDFCY CG +GH  H+CD
Subjt:  TLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECD

XP_024038344.1 uncharacterized protein LOC112097374 [Citrus clementina]2.2e-2940.59Show/hide
Query:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK
        EVKIE  G NIF+ KF  +  K RV+  G+W FD AL+V  EPK        +F +V FWV   N+P  C  R++   LG  IGK  E ETDENG   G+
Subjt:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK

Query:  TLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECDVEEEDPNEKLKFGV
          R+++ ++I  PL++   ++    +D   +   YERLPDFC++CG +G+   EC   +  P E+  FGV
Subjt:  TLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECDVEEEDPNEKLKFGV

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)4.1e-2939.41Show/hide
Query:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK
        EVKIEK G N+F+ KF ++  K  +M  G W FD AL+   EP G    +  +F +V FWV  H++P +C  +  A  LG  IGK  E ETD  G+  G+
Subjt:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK

Query:  TLRVKVRMDIENPLRRGSNI-RTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECDVEEEDPNEKLKFG
         LR+++ +DI  PL++   + +    AD   ++  YERLPDFC+ CGR+GH   EC   +    ++L +G
Subjt:  TLRVKVRMDIENPLRRGSNI-RTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECDVEEEDPNEKLKFG

A0A5C7H9Y2 CCHC-type domain-containing protein1.9e-3138.6Show/hide
Query:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK
        EV +E  G NIF  +F+    + R+++ G W FD  LLV  E  G+    DL+FRYV FW+  HNLP  C  R+    LG  +G+  E +  E+G+  G+
Subjt:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK

Query:  TLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHEC--DVEEEDPNEKLKFG
         +R++V +D+ NPL+RG  +  G     + +   YERLP+FCY CG++GH+V +C  + +E   +   KFG
Subjt:  TLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHEC--DVEEEDPNEKLKFG

A0A5C7IKP2 CCHC-type domain-containing protein2.6e-2839.08Show/hide
Query:  GEVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRG
        G V+IE    NIF+  F    ++  +   G W FD  L+V E+PKG     +L F  V+ WV  HNLP +C  R+ A A+   IG  +E    E+ + RG
Subjt:  GEVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRG

Query:  KTLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECDVE----EEDPNEKLKFG
        K LRVKV+++I NPL+R   +    +     +  TYERLP+FCY CGR+GH + EC  +    E      +KFG
Subjt:  KTLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECDVE----EEDPNEKLKFG

A0A6J1BSZ1 uncharacterized protein LOC1110054812.2e-3040.72Show/hide
Query:  IEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGKTLR
        ++  G NIFL  F     +NR+++ G W+FD AL++ + P   T   D++FR V  WVHF +L   C  +  AT LGNAIG F + E++ N    G  LR
Subjt:  IEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGKTLR

Query:  VKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHEC-DVEEEDPNEKLKFG
        V+VR D+  PL RG  +         WI   YERLPDF Y+CGRL HI+ +C D   +  ++ L++G
Subjt:  VKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHEC-DVEEEDPNEKLKFG

A0A6J1DU55 uncharacterized protein LOC1110231355.1e-3244.23Show/hide
Query:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK
        ++ +E  G+N+FL  F  +   NRVMK G W FD AL+V ++P  + +  +LEF  V FW+H  +LP     +  A  LGNAIG FV+ + +E G   G 
Subjt:  EVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGK

Query:  TLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECD
        +LR++V +DI  PLRRG  I         WI   YERLPDFCY CG +GH  H+CD
Subjt:  TLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding1.0e-0823.57Show/hide
Query:  FRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGKTLRVKVRMDIENPLR
        F+++     +++ G WSF+D + V +  +      D EF+ + FW+    +P      +  T++G  +G F+E                           
Subjt:  FRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGKTLRVKVRMDIENPLR

Query:  RGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHEC
              T    D S +K  YE+L +FC  CG L H   EC
Subjt:  RGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHEC

AT5G32613.1 Zinc knuckle (CCHC-type) family protein3.9e-0826.55Show/hide
Query:  PKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGKTLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFC
        P G +  E  E +    W    N+P   Y  +  + + + IG+ +  E    G +     +VKV  ++  PL     +R     + + +  TY R P  C
Subjt:  PKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGKTLRVKVRMDIENPLRRGSNIRTGSMADKSWIKATYERLPDFC

Query:  YNCGRLGHIVHEC
         NCGR GH++  C
Subjt:  YNCGRLGHIVHEC

AT5G36228.1 nucleic acid binding;zinc ion binding7.6e-1227.56Show/hide
Query:  FLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGKTLRVKVRMDIE
        F  +FR++      ++   W F++  +  +  + +  TED    ++D WVH   +P      +    + + +G+ V  + +E    +   +RVKVRMD  
Subjt:  FLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGKTLRVKVRMDIE

Query:  NPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECDV---EEEDPNE
         PLR    +R  S  +++ I   YE+L   C NC R+ H V  C     +EE  NE
Subjt:  NPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECDV---EEEDPNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGAGAAGTCAAAATTGAGAAGGCGGGGAGAAATATCTTTCTGTGCAAATTTCGAACAAAACGTTTAAAAAACAGAGTAATGAAGGAGGGGTCGTGGAGTTTTGA
CGATGCTCTTCTGGTCTTCGAAGAACCAAAAGGAAATACAAGCACAGAGGACCTCGAATTCAGGTATGTTGATTTTTGGGTCCATTTCCACAACTTACCCCGAGTCTGCT
ATTGCAGGAAGTATGCGACGGCCTTGGGCAACGCAATCGGGAAGTTCGTGGAAGCAGAGACAGACGAAAACGGAAAAATGAGGGGAAAAACGCTCAGAGTCAAAGTCAGA
ATGGACATTGAAAATCCGCTTAGAAGAGGATCTAACATCAGAACTGGATCAATGGCTGATAAATCTTGGATTAAAGCTACGTATGAGAGATTACCAGATTTTTGCTACAA
TTGCGGTAGGTTGGGTCATATTGTTCATGAATGTGACGTCGAAGAAGAGGATCCGAATGAGAAGCTTAAATTTGGAGTTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGAGAAGTCAAAATTGAGAAGGCGGGGAGAAATATCTTTCTGTGCAAATTTCGAACAAAACGTTTAAAAAACAGAGTAATGAAGGAGGGGTCGTGGAGTTTTGA
CGATGCTCTTCTGGTCTTCGAAGAACCAAAAGGAAATACAAGCACAGAGGACCTCGAATTCAGGTATGTTGATTTTTGGGTCCATTTCCACAACTTACCCCGAGTCTGCT
ATTGCAGGAAGTATGCGACGGCCTTGGGCAACGCAATCGGGAAGTTCGTGGAAGCAGAGACAGACGAAAACGGAAAAATGAGGGGAAAAACGCTCAGAGTCAAAGTCAGA
ATGGACATTGAAAATCCGCTTAGAAGAGGATCTAACATCAGAACTGGATCAATGGCTGATAAATCTTGGATTAAAGCTACGTATGAGAGATTACCAGATTTTTGCTACAA
TTGCGGTAGGTTGGGTCATATTGTTCATGAATGTGACGTCGAAGAAGAGGATCCGAATGAGAAGCTTAAATTTGGAGTTGAGTAA
Protein sequenceShow/hide protein sequence
MVGEVKIEKAGRNIFLCKFRTKRLKNRVMKEGSWSFDDALLVFEEPKGNTSTEDLEFRYVDFWVHFHNLPRVCYCRKYATALGNAIGKFVEAETDENGKMRGKTLRVKVR
MDIENPLRRGSNIRTGSMADKSWIKATYERLPDFCYNCGRLGHIVHECDVEEEDPNEKLKFGVE