; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022104 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022104
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:18416376..18416792
RNA-Seq ExpressionLag0022104
SyntenyLag0022104
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]1.6e-1133.87Show/hide
Query:  NICEQLEELNLTAEERGNVAGMDDKELKAKVQDLESVAVCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDR
        +I  + E+L+L  ++ G +  +     +   Q L    + K  T K IN + FKS I  IW+    V+M+  G N+F+ +F N  ++KRI+EGGPW++D+
Subjt:  NICEQLEELNLTAEERGNVAGMDDKELKAKVQDLESVAVCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDR

Query:  ALLLFEEIKGEKRYSRMEFRYSSF
         LL+  E  G ++ + ++FRY  F
Subjt:  ALLLFEEIKGEKRYSRMEFRYSSF

TXG62563.1 hypothetical protein EZV62_009557 [Acer yangbiense]5.1e-1335.9Show/hide
Query:  NVAGMDDKELKAKVQDL-------ESVAVC---KIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDRALLLFEE
        N   + +KE  AK+ D+       + +A+C   K+ T K +N + FK ++ +IW + G V ++   DN+FEC F N++ +KRI+ GGPW +DRA+++FEE
Subjt:  NVAGMDDKELKAKVQDL-------ESVAVC---KIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDRALLLFEE

Query:  IKGEKRYSRMEFRYSSF
          G      M F  + F
Subjt:  IKGEKRYSRMEFRYSSF

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]2.3e-1333.05Show/hide
Query:  ICEQLEELNLTAEERGNVAGMDDKELKAKVQDLESVAVCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDRA
        +  Q+E L LT EE+G +  M + E++   +  +   VCK+ T K+I  ++FK+M+P+IW  V  V ++  G NLF C+F  V++K +I+  GP  +D++
Subjt:  ICEQLEELNLTAEERGNVAGMDDKELKAKVQDLESVAVCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDRA

Query:  LLLFEEIKGEKRYSRMEF
        +++ EE +    ++ +E+
Subjt:  LLLFEEIKGEKRYSRMEF

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.6e-1433.86Show/hide
Query:  ICEQLEELNLTAEERGNVAGMDDKEL----KAKVQDLESVA----VCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEG
        + + +E L LT EE+G +  M + E+    + +++D +  A    VCK+ T K+I  ++FK+M+P+IW  V  V ++  G NLF C+F  V++K +I+  
Subjt:  ICEQLEELNLTAEERGNVAGMDDKEL----KAKVQDLESVA----VCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEG

Query:  GPWIYDRALLLFEEIKGEKRYSRMEFR
        GPW +D+++++ EE +    ++ +EFR
Subjt:  GPWIYDRALLLFEEIKGEKRYSRMEFR

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]1.6e-1433.86Show/hide
Query:  ICEQLEELNLTAEERGNVAGMDDKEL----KAKVQDLESVA----VCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEG
        + + +E L LT EE+G +  M + E+    + +++D +  A    VCK+ T K+I  ++FK+M+P+IW  V  V ++  G NLF C+F  V++K +I+  
Subjt:  ICEQLEELNLTAEERGNVAGMDDKEL----KAKVQDLESVA----VCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEG

Query:  GPWIYDRALLLFEEIKGEKRYSRMEFR
        GPW +D+++++ EE +    ++ +EFR
Subjt:  GPWIYDRALLLFEEIKGEKRYSRMEFR

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein8.0e-1233.87Show/hide
Query:  NICEQLEELNLTAEERGNVAGMDDKELKAKVQDLESVAVCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDR
        +I  + E+L+L  ++ G +  +     +   Q L    + K  T K IN + FKS I  IW+    V+M+  G N+F+ +F N  ++KRI+EGGPW++D+
Subjt:  NICEQLEELNLTAEERGNVAGMDDKELKAKVQDLESVAVCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDR

Query:  ALLLFEEIKGEKRYSRMEFRYSSF
         LL+  E  G ++ + ++FRY  F
Subjt:  ALLLFEEIKGEKRYSRMEFRYSSF

A0A5C7HZD3 CCHC-type domain-containing protein2.5e-1335.9Show/hide
Query:  NVAGMDDKELKAKVQDL-------ESVAVC---KIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDRALLLFEE
        N   + +KE  AK+ D+       + +A+C   K+ T K +N + FK ++ +IW + G V ++   DN+FEC F N++ +KRI+ GGPW +DRA+++FEE
Subjt:  NVAGMDDKELKAKVQDL-------ESVAVC---KIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDRALLLFEE

Query:  IKGEKRYSRMEFRYSSF
          G      M F  + F
Subjt:  IKGEKRYSRMEFRYSSF

A0A6J1CQJ5 uncharacterized protein LOC1110134131.1e-1333.05Show/hide
Query:  ICEQLEELNLTAEERGNVAGMDDKELKAKVQDLESVAVCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDRA
        +  Q+E L LT EE+G +  M + E++   +  +   VCK+ T K+I  ++FK+M+P+IW  V  V ++  G NLF C+F  V++K +I+  GP  +D++
Subjt:  ICEQLEELNLTAEERGNVAGMDDKELKAKVQDLESVAVCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPWIYDRA

Query:  LLLFEEIKGEKRYSRMEF
        +++ EE +    ++ +E+
Subjt:  LLLFEEIKGEKRYSRMEF

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X17.7e-1533.86Show/hide
Query:  ICEQLEELNLTAEERGNVAGMDDKEL----KAKVQDLESVA----VCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEG
        + + +E L LT EE+G +  M + E+    + +++D +  A    VCK+ T K+I  ++FK+M+P+IW  V  V ++  G NLF C+F  V++K +I+  
Subjt:  ICEQLEELNLTAEERGNVAGMDDKEL----KAKVQDLESVA----VCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEG

Query:  GPWIYDRALLLFEEIKGEKRYSRMEFR
        GPW +D+++++ EE +    ++ +EFR
Subjt:  GPWIYDRALLLFEEIKGEKRYSRMEFR

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X27.7e-1533.86Show/hide
Query:  ICEQLEELNLTAEERGNVAGMDDKEL----KAKVQDLESVA----VCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEG
        + + +E L LT EE+G +  M + E+    + +++D +  A    VCK+ T K+I  ++FK+M+P+IW  V  V ++  G NLF C+F  V++K +I+  
Subjt:  ICEQLEELNLTAEERGNVAGMDDKEL----KAKVQDLESVA----VCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEG

Query:  GPWIYDRALLLFEEIKGEKRYSRMEFR
        GPW +D+++++ EE +    ++ +EFR
Subjt:  GPWIYDRALLLFEEIKGEKRYSRMEFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAAAGGAATGGGTCTCAAGACACGAGCGAGGGGAACATCTGTGAGCAGTTGGAAGAGCTAAACCTGACGGCTGAAGAGAGAGGGAATGTTGCGGGGATGGA
CGACAAGGAACTAAAGGCAAAAGTTCAAGACCTAGAAAGTGTAGCAGTGTGTAAAATTTTTACAAAGAAACACATCAACCCAAAGATCTTTAAAAGCATGATACCGAAGA
TATGGAAAATGGTAGGAAGAGTAAGCATGAAAAAAGCCGGTGATAATCTCTTTGAATGTCAGTTCAATAATGTAAAGGAAAAGAAAAGAATTATGGAAGGGGGTCCGTGG
ATATATGACAGGGCTCTCCTGCTGTTTGAAGAGATAAAGGGGGAAAAAAGGTATTCAAGAATGGAATTTAGATATTCCTCGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGAAAGGAATGGGTCTCAAGACACGAGCGAGGGGAACATCTGTGAGCAGTTGGAAGAGCTAAACCTGACGGCTGAAGAGAGAGGGAATGTTGCGGGGATGGA
CGACAAGGAACTAAAGGCAAAAGTTCAAGACCTAGAAAGTGTAGCAGTGTGTAAAATTTTTACAAAGAAACACATCAACCCAAAGATCTTTAAAAGCATGATACCGAAGA
TATGGAAAATGGTAGGAAGAGTAAGCATGAAAAAAGCCGGTGATAATCTCTTTGAATGTCAGTTCAATAATGTAAAGGAAAAGAAAAGAATTATGGAAGGGGGTCCGTGG
ATATATGACAGGGCTCTCCTGCTGTTTGAAGAGATAAAGGGGGAAAAAAGGTATTCAAGAATGGAATTTAGATATTCCTCGTTCTAG
Protein sequenceShow/hide protein sequence
MEEERNGSQDTSEGNICEQLEELNLTAEERGNVAGMDDKELKAKVQDLESVAVCKIFTKKHINPKIFKSMIPKIWKMVGRVSMKKAGDNLFECQFNNVKEKKRIMEGGPW
IYDRALLLFEEIKGEKRYSRMEFRYSSF