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Lag0022105 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022105
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:18418592..18418903
RNA-Seq ExpressionLag0022105
SyntenyLag0022105
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7147901.1 hypothetical protein RHSIM_Rhsim03G0083400 [Rhododendron simsii]1.0e-0535.48Show/hide
Query:  DTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSEALNGEKPRYGAELKMDYAQR-----------GKIRNQKDVGGTDRSSEHKRDRGTK
        D  G ++WI  K+EKLPD+ Y CGR+GH  + C +    +G+K  YG EL+   A+R           G   + +D   T + SEH  DR  +
Subjt:  DTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSEALNGEKPRYGAELKMDYAQR-----------GKIRNQKDVGGTDRSSEHKRDRGTK

KAG5516129.1 hypothetical protein RHGRI_036993 [Rhododendron griersonianum]1.1e-0439.34Show/hide
Query:  RIDTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSEALNGEKPRYGAELKMDYAQRGK
        R   + ++ WI  K+EKL DY Y CGR+GH  K C +   + G  P YG +L+M+ +   K
Subjt:  RIDTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSEALNGEKPRYGAELKMDYAQRGK

KAG5517160.1 hypothetical protein RHGRI_037799 [Rhododendron griersonianum]6.5e-0543.1Show/hide
Query:  KGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSEALNGEKPRYGAELKMDYAQRGKI
        +  E WI  K+EKL DY+Y CGRLGH  K C +   + G  P Y  +L+   A+R  I
Subjt:  KGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSEALNGEKPRYGAELKMDYAQRGKI

KAG5536301.1 hypothetical protein RHGRI_023918 [Rhododendron griersonianum]2.2e-0540.35Show/hide
Query:  DTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSEALNGEKPRYGAELKMDYAQR
        D    ++WI  K+E+LPD+ Y CGR+GH  + C +    +G+K  YG EL+   A+R
Subjt:  DTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSEALNGEKPRYGAELKMDYAQR

TXG73180.1 hypothetical protein EZV62_001759 [Acer yangbiense]8.5e-0535.96Show/hide
Query:  IRIDTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSE----ALNGEKPRYGAELKMDYAQRGKIRNQKDVGGT----DRSSEHKRD
        +++    E   + +K+E+LPD+ Y CGR+GH+ KEC   E    AL+G   +YG  LK    ++ K R Q  + G+    D+S E K D
Subjt:  IRIDTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSE----ALNGEKPRYGAELKMDYAQRGKIRNQKDVGGT----DRSSEHKRD

TrEMBL top hitse value%identityAlignment
A0A5C7H857 CCHC-type domain-containing protein1.2e-0434.83Show/hide
Query:  IRIDTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKEC----GYSEALNGEKPRYGAELKMDYAQRGKIRNQKDVGG--TDRSSEHKRDRG
        +++D       + +K+E+LP++ Y CG++GH  KEC      +EAL G+  ++GA ++     R KIRNQ    G  TDR    +  RG
Subjt:  IRIDTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKEC----GYSEALNGEKPRYGAELKMDYAQRGKIRNQKDVGG--TDRSSEHKRDRG

A0A5C7HB80 CCHC-type domain-containing protein2.7e-0436.49Show/hide
Query:  IKIKFEKLPDYYYGCGRLGHLTKEC----GYSEALNGEKPRYGAELKMDYAQRGKIRNQKDVGGT----DRSSE
        + +K+E+LP++ Y CG++GH  KEC      +EAL G+  ++G+ +++    R KI+NQ    G+    DRS E
Subjt:  IKIKFEKLPDYYYGCGRLGHLTKEC----GYSEALNGEKPRYGAELKMDYAQRGKIRNQKDVGGT----DRSSE

A0A5C7IST8 CCHC-type domain-containing protein4.6e-0432.58Show/hide
Query:  IRIDTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKEC----GYSEALNGEKPRYGAELKMDYAQRGKIRNQKDVGG--TDRSSEHKRDRG
        +++D       + +K+E+LP++ Y CG++GH  KEC      +EAL+G+  ++G+ ++     R K RNQ    G  TDR    +  RG
Subjt:  IRIDTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKEC----GYSEALNGEKPRYGAELKMDYAQRGKIRNQKDVGG--TDRSSEHKRDRG

A0A5C7IV30 CCHC-type domain-containing protein4.1e-0535.96Show/hide
Query:  IRIDTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSE----ALNGEKPRYGAELKMDYAQRGKIRNQKDVGGT----DRSSEHKRD
        +++    E   + +K+E+LPD+ Y CGR+GH+ KEC   E    AL+G   +YG  LK    ++ K R Q  + G+    D+S E K D
Subjt:  IRIDTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSE----ALNGEKPRYGAELKMDYAQRGKIRNQKDVGGT----DRSSEHKRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGAATAGACACCAAAGGGGAGGAGAAATGGATCAAGATAAAGTTTGAGAAGTTGCCGGACTACTACTATGGATGCGGAAGATTGGGCCACCTTACAAAGGAATG
TGGCTACTCGGAAGCTTTGAACGGAGAAAAACCACGGTATGGAGCAGAGCTAAAAATGGATTATGCCCAAAGAGGAAAGATAAGGAACCAGAAGGATGTTGGGGGAACAG
ATCGGTCGAGTGAGCACAAAAGAGACAGGGGTACAAAAGACGATAAAGAAAAACACAACAACAAGGCCAAAAGAGGGAACAAGCAACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGAATAGACACCAAAGGGGAGGAGAAATGGATCAAGATAAAGTTTGAGAAGTTGCCGGACTACTACTATGGATGCGGAAGATTGGGCCACCTTACAAAGGAATG
TGGCTACTCGGAAGCTTTGAACGGAGAAAAACCACGGTATGGAGCAGAGCTAAAAATGGATTATGCCCAAAGAGGAAAGATAAGGAACCAGAAGGATGTTGGGGGAACAG
ATCGGTCGAGTGAGCACAAAAGAGACAGGGGTACAAAAGACGATAAAGAAAAACACAACAACAAGGCCAAAAGAGGGAACAAGCAACAATAA
Protein sequenceShow/hide protein sequence
MIRIDTKGEEKWIKIKFEKLPDYYYGCGRLGHLTKECGYSEALNGEKPRYGAELKMDYAQRGKIRNQKDVGGTDRSSEHKRDRGTKDDKEKHNNKAKRGNKQQ