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Lag0022116 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022116
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr7:18733482..18734518
RNA-Seq ExpressionLag0022116
SyntenyLag0022116
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4378427.1 hypothetical protein F8388_021621 [Cannabis sativa]1.8e-0935.04Show/hide
Query:  PRKFVGEVAAACY-EELKNREIMLEKGF---DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKT--VVRGQIVEWSPSTINQF
        PRKF+ + A A Y + ++++E  +E+G    D+N  S+P  L   I+ + W+ LC  P  AV  +VKEFYANF  +  W    +VR   V +S   IN+F
Subjt:  PRKFVGEVAAACY-EELKNREIMLEKGF---DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKT--VVRGQIVEWSPSTINQF

Query:  YDIPDF--PFAICNAMM
        + + +    F+ CN+ +
Subjt:  YDIPDF--PFAICNAMM

PIN01433.1 hypothetical protein CDL12_26059 [Handroanthus impetiginosus]4.8e-1030.97Show/hide
Query:  KFVGEVAAACYEE-LKNREIMLEKGFDENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDIPDFP
        +FV + A   Y   L  +  + E+GF+   ++    +  T+R + W+     PE  V  +V+EFYAN  ++   K +VRG+ V +   TIN+ Y+IP   
Subjt:  KFVGEVAAACYEE-LKNREIMLEKGFDENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDIPDFP

Query:  F-AICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVWLW
          A  N        E+L  TL      GA WK +K    S  S  +   A +WLW
Subjt:  F-AICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVWLW

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.6e-1333.97Show/hide
Query:  KFVGEVAAACYE-ELKNREIMLEKGF----DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDI
        KF  E A   YE  ++NR +  EKGF     E +  LP  +A  I   NW+  C HPE  +  +V+EFYAN  D       VRG  V WS   IN  + +
Subjt:  KFVGEVAAACYE-ELKNREIMLEKGF----DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDI

Query:  PDFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVW
         D P    +  +   +E  L   L+  A+ GA W  S     + + + +TP A VW
Subjt:  PDFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVW

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.7e-1333.97Show/hide
Query:  KFVGEVAAACYE-ELKNREIMLEKGF----DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDI
        KF  E AA  YE  ++NR +  EKGF     E +  LP  +A  I   NW+  C HPE  +  +V+EFYAN  D       VRG  V WS   IN  + +
Subjt:  KFVGEVAAACYE-ELKNREIMLEKGF----DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDI

Query:  PDFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVW
         D P    +  +   +++ L   L+  A  GA W  S     + + + +TP A VW
Subjt:  PDFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVW

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]4.8e-1037.5Show/hide
Query:  KFVGEVAAACYEE-LKNREIMLEKGF-DENLDSL--PHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDIP
        KF  E A   YEE ++NR +  EKGF  +N   L  P  +A  I   NWQ  C HPE  +  +V+EFYAN  +       VRG  V  S   IN  Y + 
Subjt:  KFVGEVAAACYEE-LKNREIMLEKGF-DENLDSL--PHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDIP

Query:  DFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQS
        D P    +  + A +E +L   L+  AI GA W  S
Subjt:  DFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQS

TrEMBL top hitse value%identityAlignment
A0A2G9G807 Uncharacterized protein2.3e-1030.97Show/hide
Query:  KFVGEVAAACYEE-LKNREIMLEKGFDENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDIPDFP
        +FV + A   Y   L  +  + E+GF+   ++    +  T+R + W+     PE  V  +V+EFYAN  ++   K +VRG+ V +   TIN+ Y+IP   
Subjt:  KFVGEVAAACYEE-LKNREIMLEKGFDENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDIPDFP

Query:  F-AICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVWLW
          A  N        E+L  TL      GA WK +K    S  S  +   A +WLW
Subjt:  F-AICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVWLW

A0A2P5AGA5 Uncharacterized protein (Fragment)1.7e-1333.97Show/hide
Query:  KFVGEVAAACYE-ELKNREIMLEKGF----DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDI
        KF  E A   YE  ++NR +  EKGF     E +  LP  +A  I   NW+  C HPE  +  +V+EFYAN  D       VRG  V WS   IN  + +
Subjt:  KFVGEVAAACYE-ELKNREIMLEKGF----DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDI

Query:  PDFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVW
         D P    +  +   +E  L   L+  A+ GA W  S     + + + +TP A VW
Subjt:  PDFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVW

A0A2P5BCG4 Uncharacterized protein (Fragment)1.3e-1333.97Show/hide
Query:  KFVGEVAAACYE-ELKNREIMLEKGF----DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDI
        KF  E AA  YE  ++NR +  EKGF     E +  LP  +A  I   NW+  C HPE  +  +V+EFYAN  D       VRG  V WS   IN  + +
Subjt:  KFVGEVAAACYE-ELKNREIMLEKGF----DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDI

Query:  PDFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVW
         D P    +  +   +++ L   L+  A  GA W  S     + + + +TP A VW
Subjt:  PDFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVW

A0A2P5CXV1 Uncharacterized protein2.3e-1037.5Show/hide
Query:  KFVGEVAAACYEE-LKNREIMLEKGF-DENLDSL--PHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDIP
        KF  E A   YEE ++NR +  EKGF  +N   L  P  +A  I   NWQ  C HPE  +  +V+EFYAN  +       VRG  V  S   IN  Y + 
Subjt:  KFVGEVAAACYEE-LKNREIMLEKGF-DENLDSL--PHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDIP

Query:  DFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQS
        D P    +  + A +E +L   L+  AI GA W  S
Subjt:  DFPFAICNAMMIAPSEEQLKATLQYCAIEGASWKQS

A0A7J6G6G2 Fanconi-associated nuclease8.9e-1035.04Show/hide
Query:  PRKFVGEVAAACY-EELKNREIMLEKGF---DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKT--VVRGQIVEWSPSTINQF
        PRKF+ + A A Y + ++++E  +E+G    D+N  S+P  L   I+ + W+ LC  P  AV  +VKEFYANF  +  W    +VR   V +S   IN+F
Subjt:  PRKFVGEVAAACY-EELKNREIMLEKGF---DENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKT--VVRGQIVEWSPSTINQF

Query:  YDIPDF--PFAICNAMM
        + + +    F+ CN+ +
Subjt:  YDIPDF--PFAICNAMM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCCATGAGTGAAGTGCCAAGGAAATTTGTAGGCGAGGTTGCAGCCGCATGTTATGAAGAGCTGAAGAACAGAGAGATAATGCTAGAAAAAGGCTTTGATGAAAA
TCTTGACAGCTTACCGCATATGCTGGCGGTTACAATTAGAAATCAGAATTGGCAAAACTTATGCCATCACCCCGAGCCAGCTGTCCCTAGCATTGTCAAGGAATTTTATG
CAAATTTTCAGGATAACGGCGTTTGGAAAACAGTGGTGCGAGGACAGATTGTGGAATGGAGTCCGTCTACTATTAATCAATTCTATGATATACCCGATTTCCCCTTTGCC
ATCTGCAATGCCATGATGATAGCGCCTTCAGAAGAGCAGCTCAAGGCGACCTTGCAATATTGTGCTATAGAGGGCGCGAGTTGGAAGCAAAGTAAAAATAGCAACTGTTC
CTTGTTGTCCGCCTATGTGACTCCTGAAGCTAATGTGTGGCTTTGGGCAGGGGTGCAGTTGGAAGAAGGAGATGATCTCGCAGTTGACAAGAGAATTATAGATGCGGCGT
CTATCAAGCGATTAATGGGCGATGGTAAATCAAGGAAAACGTCAACTGTAGCCAGCGGAATAGAAGAAATCCTTAGACAACAAAGAGAATTGCTGCAACATGTGCAGCAC
CAAGGCGAGCAGCAAAGAGTTTATTGGGAATACGCATGGAAAAGAGACGAAATGGTCGAGAAGGCTATTAACTCTGATCAGGAAGAGGCTCTACCACCTTTCCCTCCATT
CCCTCATAGCGTTTTAAGCCCTTGGTGTCCTCCCTCCGAAGAAGATGTAGAAGAAGATGAAGAGGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCCATGAGTGAAGTGCCAAGGAAATTTGTAGGCGAGGTTGCAGCCGCATGTTATGAAGAGCTGAAGAACAGAGAGATAATGCTAGAAAAAGGCTTTGATGAAAA
TCTTGACAGCTTACCGCATATGCTGGCGGTTACAATTAGAAATCAGAATTGGCAAAACTTATGCCATCACCCCGAGCCAGCTGTCCCTAGCATTGTCAAGGAATTTTATG
CAAATTTTCAGGATAACGGCGTTTGGAAAACAGTGGTGCGAGGACAGATTGTGGAATGGAGTCCGTCTACTATTAATCAATTCTATGATATACCCGATTTCCCCTTTGCC
ATCTGCAATGCCATGATGATAGCGCCTTCAGAAGAGCAGCTCAAGGCGACCTTGCAATATTGTGCTATAGAGGGCGCGAGTTGGAAGCAAAGTAAAAATAGCAACTGTTC
CTTGTTGTCCGCCTATGTGACTCCTGAAGCTAATGTGTGGCTTTGGGCAGGGGTGCAGTTGGAAGAAGGAGATGATCTCGCAGTTGACAAGAGAATTATAGATGCGGCGT
CTATCAAGCGATTAATGGGCGATGGTAAATCAAGGAAAACGTCAACTGTAGCCAGCGGAATAGAAGAAATCCTTAGACAACAAAGAGAATTGCTGCAACATGTGCAGCAC
CAAGGCGAGCAGCAAAGAGTTTATTGGGAATACGCATGGAAAAGAGACGAAATGGTCGAGAAGGCTATTAACTCTGATCAGGAAGAGGCTCTACCACCTTTCCCTCCATT
CCCTCATAGCGTTTTAAGCCCTTGGTGTCCTCCCTCCGAAGAAGATGTAGAAGAAGATGAAGAGGAAGATTGA
Protein sequenceShow/hide protein sequence
MEAMSEVPRKFVGEVAAACYEELKNREIMLEKGFDENLDSLPHMLAVTIRNQNWQNLCHHPEPAVPSIVKEFYANFQDNGVWKTVVRGQIVEWSPSTINQFYDIPDFPFA
ICNAMMIAPSEEQLKATLQYCAIEGASWKQSKNSNCSLLSAYVTPEANVWLWAGVQLEEGDDLAVDKRIIDAASIKRLMGDGKSRKTSTVASGIEEILRQQRELLQHVQH
QGEQQRVYWEYAWKRDEMVEKAINSDQEEALPPFPPFPHSVLSPWCPPSEEDVEEDEEED