; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022123 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022123
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionU11/U12 small nuclear ribonucleoprotein 65 kDa protein
Genome locationchr7:18914561..18942249
RNA-Seq ExpressionLag0022123
SyntenyLag0022123
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139973.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 [Cucumis sativus]1.4e-14990.32Show/hide
Query:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        M+GAAIKD I+KDH ++DHTEGMRAR LHFGEPIAARLGVDYPFPPHLEYAYPPPDGNIL NIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        PSIPAPPSPSLTLPPLPPPVT R QVTNM SDESEMESSEEDVEGKYN SGVSKTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA
        NPV QIRIAPKV+ D K  NINN+ EE EKEA DLKPYATLEDLERGKLPPEEILSLPMFKNYTAG+PTSVLYIKNLAKDV+NDDL+YIFGS+F GIDEA
Subjt:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA

Query:  KSSLTVKLMQ
        KS+LTVKLMQ
Subjt:  KSSLTVKLMQ

XP_011656912.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X3 [Cucumis sativus]1.4e-14990.32Show/hide
Query:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        M+GAAIKD I+KDH ++DHTEGMRAR LHFGEPIAARLGVDYPFPPHLEYAYPPPDGNIL NIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        PSIPAPPSPSLTLPPLPPPVT R QVTNM SDESEMESSEEDVEGKYN SGVSKTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA
        NPV QIRIAPKV+ D K  NINN+ EE EKEA DLKPYATLEDLERGKLPPEEILSLPMFKNYTAG+PTSVLYIKNLAKDV+NDDL+YIFGS+F GIDEA
Subjt:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA

Query:  KSSLTVKLMQ
        KS+LTVKLMQ
Subjt:  KSSLTVKLMQ

XP_022932769.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Cucurbita moschata]1.3e-15090.13Show/hide
Query:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MD AAIKD   KDH +KDHTEGMRAR LHFGEPIAARLGVDYPFPPHLEYAYPPPDGNIL NIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        PS+PAPPS SLTLPPLPPP TPRPQ+TNMSSDESEMESSEEDVEGKYNSSGVSKTA+SGNKRSRCE IVGPGIDKDVAHE VGVKPSTLVPKEIPMIKKK
Subjt:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVFQIRIAPKVVPDR----KDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGG
        NPVFQ +IAPKVV DR    K+D+INNE+EE EKEA DLK YATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDL+YIFGS+FGG
Subjt:  NPVFQIRIAPKVVPDR----KDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGG

Query:  IDEAKSSLTVKLMQ
        IDEAKS+LTVKLMQ
Subjt:  IDEAKSSLTVKLMQ

XP_023540623.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Cucurbita pepo subsp. pepo]1.1e-14989.81Show/hide
Query:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MD AAIKD   KDH +KDHTEGMRAR LHFGEPIAARLGVDYPFPPHLEYAYPPPDGNIL NIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        PS+PAPPS SLTLPPLPPP TPRPQ+TNMSSDESEMESSEEDVEGKYNSSGVSKTA+SGNKRSRCE IVGPGIDKDVAHE VGVKPSTLVPKEIPMIKKK
Subjt:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVFQIRIAPKVVPD----RKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGG
        NPVFQ +IAPKVV D     K+D+INNE+EE EKEA DLK YATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDL+YIFGS+FGG
Subjt:  NPVFQIRIAPKVVPD----RKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGG

Query:  IDEAKSSLTVKLMQ
        IDEAKS+LTVKLMQ
Subjt:  IDEAKSSLTVKLMQ

XP_031743237.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X2 [Cucumis sativus]1.4e-14990.32Show/hide
Query:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        M+GAAIKD I+KDH ++DHTEGMRAR LHFGEPIAARLGVDYPFPPHLEYAYPPPDGNIL NIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        PSIPAPPSPSLTLPPLPPPVT R QVTNM SDESEMESSEEDVEGKYN SGVSKTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA
        NPV QIRIAPKV+ D K  NINN+ EE EKEA DLKPYATLEDLERGKLPPEEILSLPMFKNYTAG+PTSVLYIKNLAKDV+NDDL+YIFGS+F GIDEA
Subjt:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA

Query:  KSSLTVKLMQ
        KS+LTVKLMQ
Subjt:  KSSLTVKLMQ

TrEMBL top hitse value%identityAlignment
A0A0A0KCT1 RRM domain-containing protein6.9e-15090.32Show/hide
Query:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        M+GAAIKD I+KDH ++DHTEGMRAR LHFGEPIAARLGVDYPFPPHLEYAYPPPDGNIL NIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        PSIPAPPSPSLTLPPLPPPVT R QVTNM SDESEMESSEEDVEGKYN SGVSKTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA
        NPV QIRIAPKV+ D K  NINN+ EE EKEA DLKPYATLEDLERGKLPPEEILSLPMFKNYTAG+PTSVLYIKNLAKDV+NDDL+YIFGS+F GIDEA
Subjt:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA

Query:  KSSLTVKLMQ
        KS+LTVKLMQ
Subjt:  KSSLTVKLMQ

A0A1S3BIH7 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X17.2e-14789.03Show/hide
Query:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        M+ AAIK  I+KDH ++DHTEGMRAR LHFGEPIAARLGVDYPFPPHLEYAYPPPDGNIL NIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        PS PAPPSPSLTLPPLPPP T R QVTNM SDESEMESSEEDVEGKYNSSGVSKTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA
        NPV QIRIAPKV+ D K D  NN+ E  EKEA DLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDV+NDDL+YIFGS+F GIDEA
Subjt:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA

Query:  KSSLTVKLMQ
        KS+LTVKLMQ
Subjt:  KSSLTVKLMQ

A0A6J1DFW4 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X11.2e-14990.32Show/hide
Query:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MDGA+ K G+AKDHM+KDHTEGMRAR LH  EPIAARLGVDYPFPPHLEYAYPPPDGNIL NIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        PSIPAPPSPSLTLPP P P TPRP VTNMSSDESEMESSEE+VEGKY+SSGVSKTAK GNKRSRCETIVGPGIDKDVAHEAVGVKPS LVPKEIPMI KK
Subjt:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA
        NPVFQI+I PKV+ D KDD INNELEEPEKE  DLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDL+YIFGS+FGGID+A
Subjt:  NPVFQIRIAPKVVPDRKDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEA

Query:  KSSLTVKLMQ
        KS+LTVKLMQ
Subjt:  KSSLTVKLMQ

A0A6J1EXB4 U11/U12 small nuclear ribonucleoprotein 65 kDa protein6.3e-15190.13Show/hide
Query:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MD AAIKD   KDH +KDHTEGMRAR LHFGEPIAARLGVDYPFPPHLEYAYPPPDGNIL NIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        PS+PAPPS SLTLPPLPPP TPRPQ+TNMSSDESEMESSEEDVEGKYNSSGVSKTA+SGNKRSRCE IVGPGIDKDVAHE VGVKPSTLVPKEIPMIKKK
Subjt:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVFQIRIAPKVVPDR----KDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGG
        NPVFQ +IAPKVV DR    K+D+INNE+EE EKEA DLK YATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDL+YIFGS+FGG
Subjt:  NPVFQIRIAPKVVPDR----KDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGG

Query:  IDEAKSSLTVKLMQ
        IDEAKS+LTVKLMQ
Subjt:  IDEAKSSLTVKLMQ

A0A6J1I4Z6 U11/U12 small nuclear ribonucleoprotein 65 kDa protein1.2e-14989.49Show/hide
Query:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MD AAIKD + KDH +KDHT GMRA  LHFGEPIAARLGVDYPFPPHLEYAYPPPDGNIL NIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        PS+PAPPS SLTLPPLPPP TPRPQ+TNMSSDESEMESSEEDVEGKYNSSGVSKTA+SGNKRSRCE IVGPGIDKDVAHE VGVKPSTLVPKEIPMIKKK
Subjt:  PSIPAPPSPSLTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVFQIRIAPKVVPDR----KDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGG
        NPVFQ +IAPKVV DR    K+D+INNE+EE EKEA DLK YATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDL+YIFGS+FGG
Subjt:  NPVFQIRIAPKVVPDR----KDDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGG

Query:  IDEAKSSLTVKLMQ
        IDEAKS+LTVKLMQ
Subjt:  IDEAKSSLTVKLMQ

SwissProt top hitse value%identityAlignment
F1Q8J0 RNA-binding region-containing protein 37.6e-2131.99Show/hide
Query:  IAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRPQVTNM-SSD
        IA  LG+ +   P L+Y YPPP   IL NI + L++VP+FY QVLHLMNKMN+P+PFR P+  PP    +P+ P P    PP PP   P P+     S +
Subjt:  IAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRPQVTNM-SSD

Query:  ESEMES-SEEDVEGKYNSSGV----------SKTAKSGNKRSRCETIVGPGIDK-----------DVAHE--AVGVKPSTL-VPKEIPMIKK---KNPVF
        ESE ES  EE+ E      G+          +KT+    K    + +  P  D            DV  +  A+G K     +  E+  I +   +N   
Subjt:  ESEMES-SEEDVEGKYNSSGV----------SKTAKSGNKRSRCETIVGPGIDK-----------DVAHE--AVGVKPSTL-VPKEIPMIKK---KNPVF

Query:  QIRIAPKVVPDRK---------------DDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYI
            A +  PD +                  +  + EE E++      + +  +LERG+L  +EI  L +FK Y  G PT  LY+KN+AK V   DL +I
Subjt:  QIRIAPKVVPDRK---------------DDNINNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYI

Query:  FGSIFG-GIDEAKSSLTVKLMQ
        +G       +E ++   + LM+
Subjt:  FGSIFG-GIDEAKSSLTVKLMQ

Q3UZ01 RNA-binding region-containing protein 32.5e-1930.79Show/hide
Query:  IAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRP-QVT
        IA   G+ +P    L+Y YPPP   IL NIVNAL +VP+FY QVLHLMNKMN+P PF     R P+    +P   P PP+      P PP   P P +  
Subjt:  IAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRP-QVT

Query:  NMSSDESEMESSEEDVEGKYN--------SSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGV--------KPSTLVPKEIPMIKKKNPVFQIRIAPK
        ++SS ESE ESS+E+   + N             KT K  + R + +      I    +H    V        +P ++  K+I      N         +
Subjt:  NMSSDESEMESSEEDVEGKYN--------SSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGV--------KPSTLVPKEIPMIKKKNPVFQIRIAPK

Query:  VVPDRKDDNIN---------------------NELEEPEKEATDL-KPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYI
          P+ +++N +                     N  EE  +++ ++   + + ++LE+G++  EE+ +L +F++Y  G P   +Y+KNLA+ V   DL +I
Subjt:  VVPDRKDDNIN---------------------NELEEPEKEATDL-KPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYI

Query:  FG
        FG
Subjt:  FG

Q5R6C7 RNA-binding region-containing protein 32.9e-2032.8Show/hide
Query:  IAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRPQV-T
        IA   G+ +P    L+Y YPPP   IL NIVNAL +VP+FY QVLHLMNKMN+P PF     R P+    +P   P PP+      P PP   P P+   
Subjt:  IAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRPQV-T

Query:  NMSSDESEMESSEEDVEGKYN--------SSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIP--MIKKKNPVFQIRIAPKVVPD--
         +SS+ESE ES++++   + N             KT K  + R + +        KD+ +  +    S+L P  +P  +  +  PV   RI   +  D  
Subjt:  NMSSDESEMESSEEDVEGKYN--------SSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIP--MIKKKNPVFQIRIAPKVVPD--

Query:  ---RKD---------------------DNI---------NNELEEPEKEATDLKPYATL--EDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKD
           +KD                      NI         N ++ E  KE +D  P   +   +LE+G++  EE+ +L +F++Y  G P   +Y+KNLAK 
Subjt:  ---RKD---------------------DNI---------NNELEEPEKEATDLKPYATL--EDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKD

Query:  VVNDDLFYIFG
        V   DL YIFG
Subjt:  VVNDDLFYIFG

Q8RWV8 U11/U12 small nuclear ribonucleoprotein 65 kDa protein2.3e-7858.16Show/hide
Query:  GEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRPQVTNMS
        GEPIA +LG+DYPFPPHL+YAYPPPD NIL NI NALIAVP  YTQVLHLMNKMN+P PFRL LPTPPLP + P                  +  + + S
Subjt:  GEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRPQVTNMS

Query:  SDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVFQIRIAPKVVPDRKDDNINNE--LEEP
        S ESEMES E+             T+KSG KR+R   +VG G+DKDV HE VGVKPS+L PKEIP I+K   V QI+I  KV  D   +   NE   +EP
Subjt:  SDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVFQIRIAPKVVPDRKDDNINNE--LEEP

Query:  EKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEAKSSLTVKLMQ
        +++ ++LKP+A+LE+LE+G+LPP++ILSLPMFKNYTAG+P+ VLYIKNLAKDVV DD +YIFGS F   + AKSSL V+LMQ
Subjt:  EKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEAKSSLTVKLMQ

Q96LT9 RNA-binding region-containing protein 33.8e-2032.8Show/hide
Query:  IAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRP-QVT
        IA   G+ +P    L+Y YPPP   IL NIVNAL +VP+FY QVLHLMNKMN+P PF     R P+    +P   P PP+      P PP   P P +  
Subjt:  IAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRP-QVT

Query:  NMSSDESEMESSEEDVEGKYN--------SSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIP--MIKKKNPVFQIRIAPKVVPD--
         +SS+ESE ES++++   + N             KT K  + R + +        KD+ +  +    S+L P  +P  +  +  PV   RI   +  D  
Subjt:  NMSSDESEMESSEEDVEGKYN--------SSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIP--MIKKKNPVFQIRIAPKVVPD--

Query:  ---RKD---------------------DNI---------NNELEEPEKEATDLKPYATL--EDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKD
           +KD                      NI         N ++ E  KE +D  P   +   +LE+G++  EE+ +L +F++Y  G P   +Y+KNLAK 
Subjt:  ---RKD---------------------DNI---------NNELEEPEKEATDLKPYATL--EDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKD

Query:  VVNDDLFYIFG
        V   DL YIFG
Subjt:  VVNDDLFYIFG

Arabidopsis top hitse value%identityAlignment
AT1G09230.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-7958.16Show/hide
Query:  GEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRPQVTNMS
        GEPIA +LG+DYPFPPHL+YAYPPPD NIL NI NALIAVP  YTQVLHLMNKMN+P PFRL LPTPPLP + P                  +  + + S
Subjt:  GEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTPRPQVTNMS

Query:  SDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVFQIRIAPKVVPDRKDDNINNE--LEEP
        S ESEMES E+             T+KSG KR+R   +VG G+DKDV HE VGVKPS+L PKEIP I+K   V QI+I  KV  D   +   NE   +EP
Subjt:  SDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVFQIRIAPKVVPDRKDDNINNE--LEEP

Query:  EKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEAKSSLTVKLMQ
        +++ ++LKP+A+LE+LE+G+LPP++ILSLPMFKNYTAG+P+ VLYIKNLAKDVV DD +YIFGS F   + AKSSL V+LMQ
Subjt:  EKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEAKSSLTVKLMQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTGCTGCCATCAAAGATGGCATAGCTAAGGACCATATGAACAAAGATCATACTGAGGGTATGAGAGCAAGGTCTCTGCATTTTGGTGAGCCAATTGCTGCAAG
GCTTGGTGTGGACTATCCATTCCCTCCTCATCTTGAGTATGCTTATCCTCCTCCAGATGGCAATATCCTGATCAACATTGTTAATGCCCTCATAGCTGTCCCTCGCTTTT
ATACACAGGTGTTGCATTTAATGAACAAGATGAACATTCCAGCTCCTTTCCGATTGCCTCTACCCACTCCACCTCTCCCACCTTCCATTCCTGCACCACCATCACCATCA
CTAACGTTGCCACCACTTCCTCCTCCTGTCACTCCAAGGCCTCAAGTAACAAATATGTCTAGTGATGAGTCAGAAATGGAGTCCTCAGAAGAGGATGTGGAAGGAAAATA
TAATTCAAGTGGAGTGTCAAAAACTGCAAAATCAGGAAACAAGCGTTCTAGGTGTGAAACAATTGTAGGCCCCGGGATAGATAAAGATGTGGCTCATGAGGCTGTTGGGG
TGAAACCTTCCACATTGGTCCCAAAAGAGATTCCGATGATAAAAAAGAAAAACCCAGTGTTTCAGATTAGAATTGCCCCTAAAGTGGTTCCCGACAGAAAGGATGATAAT
ATTAATAATGAGCTCGAAGAGCCAGAAAAGGAAGCAACAGATCTTAAACCCTATGCAACACTTGAAGATTTAGAGAGAGGAAAATTGCCTCCAGAAGAAATTCTATCACT
TCCAATGTTCAAGAACTATACTGCTGGAAGTCCTACTTCGGTGCTGTATATTAAGAACTTAGCCAAAGATGTAGTGAATGATGACTTATTCTATATATTTGGATCGATAT
TTGGAGGTATTGATGAAGCCAAATCTTCTCTCACTGTGAAGCTAATGCAGAACATCTGCGAAGTTGTCAGATCAGATGTGTACTGTTCCATAAAAAGCAACATCTGTGAA
GTTGCCTCATTCTCTGAATTGTGGAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGTGCTGCCATCAAAGATGGCATAGCTAAGGACCATATGAACAAAGATCATACTGAGGGTATGAGAGCAAGGTCTCTGCATTTTGGTGAGCCAATTGCTGCAAG
GCTTGGTGTGGACTATCCATTCCCTCCTCATCTTGAGTATGCTTATCCTCCTCCAGATGGCAATATCCTGATCAACATTGTTAATGCCCTCATAGCTGTCCCTCGCTTTT
ATACACAGGTGTTGCATTTAATGAACAAGATGAACATTCCAGCTCCTTTCCGATTGCCTCTACCCACTCCACCTCTCCCACCTTCCATTCCTGCACCACCATCACCATCA
CTAACGTTGCCACCACTTCCTCCTCCTGTCACTCCAAGGCCTCAAGTAACAAATATGTCTAGTGATGAGTCAGAAATGGAGTCCTCAGAAGAGGATGTGGAAGGAAAATA
TAATTCAAGTGGAGTGTCAAAAACTGCAAAATCAGGAAACAAGCGTTCTAGGTGTGAAACAATTGTAGGCCCCGGGATAGATAAAGATGTGGCTCATGAGGCTGTTGGGG
TGAAACCTTCCACATTGGTCCCAAAAGAGATTCCGATGATAAAAAAGAAAAACCCAGTGTTTCAGATTAGAATTGCCCCTAAAGTGGTTCCCGACAGAAAGGATGATAAT
ATTAATAATGAGCTCGAAGAGCCAGAAAAGGAAGCAACAGATCTTAAACCCTATGCAACACTTGAAGATTTAGAGAGAGGAAAATTGCCTCCAGAAGAAATTCTATCACT
TCCAATGTTCAAGAACTATACTGCTGGAAGTCCTACTTCGGTGCTGTATATTAAGAACTTAGCCAAAGATGTAGTGAATGATGACTTATTCTATATATTTGGATCGATAT
TTGGAGGTATTGATGAAGCCAAATCTTCTCTCACTGTGAAGCTAATGCAGAACATCTGCGAAGTTGTCAGATCAGATGTGTACTGTTCCATAAAAAGCAACATCTGTGAA
GTTGCCTCATTCTCTGAATTGTGGAGCTAA
Protein sequenceShow/hide protein sequence
MDGAAIKDGIAKDHMNKDHTEGMRARSLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILINIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPS
LTLPPLPPPVTPRPQVTNMSSDESEMESSEEDVEGKYNSSGVSKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVFQIRIAPKVVPDRKDDN
INNELEEPEKEATDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLFYIFGSIFGGIDEAKSSLTVKLMQNICEVVRSDVYCSIKSNICE
VASFSELWS