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Lag0022129 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022129
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr7:19073148..19073626
RNA-Seq ExpressionLag0022129
SyntenyLag0022129
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035989.1 protein Ycf2-like [Cucumis melo var. makuwa]4.9e-0532.08Show/hide
Query:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQLGCRHATQVEGPRPQNFLIPKVRGKPLLATNEEIAMDY
        GR AFELL+ FM++ + SKG TGI MG  +    LG+R    PK+  +                          + + F  P +   P+LAT  E+ M Y
Subjt:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQLGCRHATQVEGPRPQNFLIPKVRGKPLLATNEEIAMDY

Query:  FQPFVD
        F PF++
Subjt:  FQPFVD

KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]1.5e-0634.82Show/hide
Query:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQ----LGCRHATQVEGP--RPQNFLIPKVRGKPLLATNE
        GR AFELL+ FM++ + SKG TGI MG FIFP L             +  P + +V   +N+    + C   TQ +    + + F  P +   P+LAT +
Subjt:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQ----LGCRHATQVEGP--RPQNFLIPKVRGKPLLATNE

Query:  EIAMDYFQPFVD
        E+ M +F PF++
Subjt:  EIAMDYFQPFVD

KAA0056158.1 protein Ycf2-like [Cucumis melo var. makuwa]5.4e-0431.53Show/hide
Query:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQL------GCRHATQVEGPRPQNFLIPKVRGKPLLATNE
        GR AFELL+ FM+KA+ SK  T I+MG FIFP L+      +     +  P + +    +N++           ++ +  + + F  P +   P+LAT  
Subjt:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQL------GCRHATQVEGPRPQNFLIPKVRGKPLLATNE

Query:  EIAMDYFQPFV
        E+   YF PF+
Subjt:  EIAMDYFQPFV

TrEMBL top hitse value%identityAlignment
A0A5A7T3K3 Protein Ycf2-like2.4e-0532.08Show/hide
Query:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQLGCRHATQVEGPRPQNFLIPKVRGKPLLATNEEIAMDY
        GR AFELL+ FM++ + SKG TGI MG  +    LG+R    PK+  +                          + + F  P +   P+LAT  E+ M Y
Subjt:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQLGCRHATQVEGPRPQNFLIPKVRGKPLLATNEEIAMDY

Query:  FQPFVD
        F PF++
Subjt:  FQPFVD

A0A5A7U047 Protein Ycf2-like7.4e-0734.82Show/hide
Query:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQ----LGCRHATQVEGP--RPQNFLIPKVRGKPLLATNE
        GR AFELL+ FM++ + SKG TGI MG FIFP L             +  P + +V   +N+    + C   TQ +    + + F  P +   P+LAT +
Subjt:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQ----LGCRHATQVEGP--RPQNFLIPKVRGKPLLATNE

Query:  EIAMDYFQPFVD
        E+ M +F PF++
Subjt:  EIAMDYFQPFVD

A0A5A7UM43 Protein Ycf2-like2.6e-0431.53Show/hide
Query:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQL------GCRHATQVEGPRPQNFLIPKVRGKPLLATNE
        GR AFELL+ FM+KA+ SK  T I+MG FIFP L+      +     +  P + +    +N++           ++ +  + + F  P +   P+LAT  
Subjt:  GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQL------GCRHATQVEGPRPQNFLIPKVRGKPLLATNE

Query:  EIAMDYFQPFV
        E+   YF PF+
Subjt:  EIAMDYFQPFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACATGGAGCACATCAAGATGGTTGATGACGAGGACTCTTCAACAATTATCCTTGGGAAGGTGCGCGTTTGAATTGTTGTTAGGATTCATGCACAAAGCCTTAGT
TAGTAAAGGCGCTACTGGTATCATGATGGGTGAGTTCATATTCCCTTATTTGCTGGGCATACGAGGTCATCCCGACCCTAAGTTCAACAAGATTTTTTTACCCGGAAGTG
TCTACGTGCATACCGAGAATAATCAACTGGGTTGTAGACACGCAACCCAAGTGGAAGGACCTAGACCGCAAAATTTTTTAATCCCCAAAGTTAGAGGTAAGCCCTTGCTT
GCAACTAATGAAGAGATCGCTATGGACTACTTCCAACCATTTGTTGATGGAGACGACCTTAAGACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACATGGAGCACATCAAGATGGTTGATGACGAGGACTCTTCAACAATTATCCTTGGGAAGGTGCGCGTTTGAATTGTTGTTAGGATTCATGCACAAAGCCTTAGT
TAGTAAAGGCGCTACTGGTATCATGATGGGTGAGTTCATATTCCCTTATTTGCTGGGCATACGAGGTCATCCCGACCCTAAGTTCAACAAGATTTTTTTACCCGGAAGTG
TCTACGTGCATACCGAGAATAATCAACTGGGTTGTAGACACGCAACCCAAGTGGAAGGACCTAGACCGCAAAATTTTTTAATCCCCAAAGTTAGAGGTAAGCCCTTGCTT
GCAACTAATGAAGAGATCGCTATGGACTACTTCCAACCATTTGTTGATGGAGACGACCTTAAGACGTGA
Protein sequenceShow/hide protein sequence
MSTWSTSRWLMTRTLQQLSLGRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQLGCRHATQVEGPRPQNFLIPKVRGKPLL
ATNEEIAMDYFQPFVDGDDLKT