| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-288 | 48.61 | Show/hide |
Query: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSR-------------------------EH-----------------------------YML------
SS++QL+ +MTL+VGTG++ISA+ VGD K+FF EH Y+L
Subjt: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSR-------------------------EH-----------------------------YML------
Query: -------------------------------------LDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRA
LD RLVKNGLL++L+D +LPPCESCLEGKMTKRPFTGKGY AKEPLEL+H+DLCGPMNV+A
Subjt: -------------------------------------LDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRA
Query: RGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI--------------------------------------------------
RGG+EYFISFIDDYSR TEVENLL K IKI
Subjt: RGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI--------------------------------------------------
Query: ---------------------------------------------PEL-----------------------------------------FDRTWN--LVS
P L FD N VS
Subjt: ---------------------------------------------PEL-----------------------------------------FDRTWN--LVS
Query: TLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFR
T +T + ++ STRVVD E GPS+RV DE +TSGQ+HPSQ LRMPRRSG VV QP RYLGL ET VIPD GVEDPL+++
Subjt: TLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFR
Query: HAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYD
AMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPI CKWIYKRKRD+AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSIRILL IATFYD
Subjt: HAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYD
Query: YEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIG
YEIWQMDVK AFLNGNL+E+IFMSQP+GF+TQGQEQKVCKL RSI+GLKQ SRSWNI+FDT +KSYGFDQNVDEPCVYK+I VAFLVLYVDDILLIG
Subjt: YEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIG
Query: NDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPT
NDV Y
Subjt: NDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPT
Query: TISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLT
Subjt: TISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLT
Query: SPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDK
L D+K WL+ +FQ+KDLGEAQYVLGIQIIR+RKNKTLALSQATYIDK
Subjt: SPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDK
Query: MLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVY
+L RY M NSK+GLLPFRHGVHLSKEQ PKTPQE+EDMRRIPYAS VGSLMY MLCTRPDI YAVGI+SRYQSNP LDHWTAVK +LKYLRRTRDY LVY
Subjt: MLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVY
Query: GSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSK
G+KDLILTGYT+SDFQTDK SRKSTSGSVFTLNGGAVVWRSIKQGCIA STMEAEYVAACEAAKEAVWLRKFL DLEVVPN+NL ITLYCDNSGAVANSK
Subjt: GSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSK
Query: EPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
EPRSHKRGKHIERKYHLIREIVQRGDVIVTK+AS HNIADPFTK LTAKVFEGHL+ LG
Subjt: EPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 1.6e-284 | 48.21 | Show/hide |
Query: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSR-------------------------EH-----------------------------YML------
SS++QL+ +MTL+VGTG++ISA+ VGD K+FF EH Y+L
Subjt: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSR-------------------------EH-----------------------------YML------
Query: -------------------------------------LDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRA
LD RLVK+GLL++L+D +LPPCESCLEGKMTKRPFTGKGY AKEPLEL+H+DLCGPMNV+A
Subjt: -------------------------------------LDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRA
Query: RGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI--------------------------------------------------
RG +EYFISFIDDYSR TEVENLL K IKI
Subjt: RGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI--------------------------------------------------
Query: ---------------------------------------------PEL-----------------------------------------FDRTWN--LVS
P L FD N VS
Subjt: ---------------------------------------------PEL-----------------------------------------FDRTWN--LVS
Query: TLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFR
T +T + ++ STRVVD E GPS+RV DE +TSGQ+HPSQ LRMPRRSG VV QP RYLGL ET VIPD GVEDPL+++
Subjt: TLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFR
Query: HAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYD
AMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPI CKWIYKRKRD+AGKVQTFKARLVAKGYT+KEGVDYEETFS VAMLKSIRILL IA FYD
Subjt: HAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYD
Query: YEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIG
YEIWQMDVK AFLNGNL+E+IFMSQP+GF+TQGQEQKVCKL RSI+GLKQ SRSWNI+FDT +KSYGFDQNVDEPCVYK+I VAFLVLYVDDILLIG
Subjt: YEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIG
Query: NDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPT
NDV Y
Subjt: NDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPT
Query: TISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLT
Subjt: TISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLT
Query: SPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDK
L D+K WL+ +FQ+KDLGE QYVLGIQIIR+RKNKTLALSQATYIDK
Subjt: SPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDK
Query: MLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVY
+L RY M NSK+GLLPFRHGVHLSKEQ PKTPQE+EDMRRIPYAS VGSLMY MLCTRPDI YAVGI+SRYQSNP LDHWTAVK ILKYLRRTRDY LVY
Subjt: MLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVY
Query: GSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSK
G+KDLILTGYTNSDFQTDK SRKSTS SVFTLNGGAVVWRSIKQGCIA STMEAEYVAACEAAKEAVWL+KFL DLEVVPN+NL ITLYCDNSGAVANSK
Subjt: GSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSK
Query: EPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
EPRSHKRGKHIERKYHLIREIVQRGDVIVTK+AS HNIADPFTK LTAKVFEGHL+ LG
Subjt: EPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 9.2e-264 | 48.92 | Show/hide |
Query: RLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRARGGYEYFISFIDDYSR---------------------TEVEN
RLVKNGLLS+LE+ +LP CESCLEGKMTKRPFTGKG+ AKEPLELVH+DLCGPMNV+ARGG+EYFI+F DDYSR EVEN
Subjt: RLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRARGGYEYFISFIDDYSR---------------------TEVEN
Query: LLGKTIK--------------------------------------IPELFDRT---------------------------------------------WN
L KTIK + E +RT WN
Subjt: LLGKTIK--------------------------------------IPELFDRT---------------------------------------------WN
Query: -------------------------------------------------------LVSTLSTRV----VDEVGPSTRVV-DEPSSE-AGPSTRVADEPS-
VST +T + + E P +++V +E S E PSTRV +EPS
Subjt: -------------------------------------------------------LVSTLSTRV----VDEVGPSTRVV-DEPSSE-AGPSTRVADEPS-
Query: --------TSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCK
+S + H Q LR PRRSG V P RY+ L ET TVI DG +EDPLTF+ AM DVD D+W+KAM+LE+ESMYFN VWDLVD P+GVKPI CK
Subjt: --------TSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCK
Query: WIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRR
WIYKRKR A GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILL IA ++DYEIWQMDVK AFLNGNL+E I+M QP+GF+ GQEQK+CKL R
Subjt: WIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRR
Query: SIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNP
SI+GLKQ SRSWNI+FDT +KSYGFDQ VDEPCVYKRIIN SVAFLVLYVDDILLIGND+
Subjt: SIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNP
Query: LPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIV
Subjt: LPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIV
Query: IHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQ
Subjt: IHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQ
Query: KSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPY
+L DIK+WL+T+FQ+KDLGEAQ+VLGIQI R+RKNK LALSQA+YIDK++ +Y M NSKRGLLPFRHGV LSKEQCPKTPQ++E+MR IPY
Subjt: KSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPY
Query: ASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIK
AS VGSLMY MLCTRPDI YAVGI+SRYQSNP L HWTAVK ILKYLRRTRDY LVYGSKDLILTGYT+SDFQTD+ SRKSTSGSVFTLNGGAVVWRSIK
Subjt: ASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIK
Query: QGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFT
QGCIA STMEAEYVAACEAAKEAVWLR FL+DLEVVPN++ ITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV RGDVIVT++AS HN+ADPFT
Subjt: QGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFT
Query: KALTAKVFEGHLKGLG
K LTAKVFEGHL+ LG
Subjt: KALTAKVFEGHLKGLG
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| KAA0050437.1 gag/pol protein [Cucumis melo var. makuwa] | 1.6e-271 | 53.61 | Show/hide |
Query: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMN
SS++QL+ +MTL VGTG++ISA+VVGD K+ ++ LD RLVKNGLL++L+D +LPPCESCLEGKMTKRPFTGKGY AKEPLEL+H+ LCGPMN
Subjt: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMN
Query: VRARGGYEYFISFIDDYSRTEVENLLGKTIKIPELFDRTWNLVSTLST----------------------------------------------RVV---
V+ARGG+EYFIS +DDYSR +LG LFDRTWN + TLST RV
Subjt: VRARGGYEYFISFIDDYSRTEVENLLGKTIKIPELFDRTWNLVSTLST----------------------------------------------RVV---
Query: ----------------------DEVGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFRH
+ STRVVD E GPS+RV DE +TSGQ+HPSQ LRMP+RSG +V QP RYLGL ET VIPD GVEDPL+++
Subjt: ----------------------DEVGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFRH
Query: AMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYDY
AMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPI CKWIYKRKRD+AGKVQTFKARLVAKGYTQ+EGVDYEETFS VAML+SIRILL IATFYDY
Subjt: AMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYDY
Query: EIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIGN
EIW+MDVK A LNGNL+E+IFMSQ +GF+TQGQEQKVCKL RSI+GLKQ SRSWNI+FDT +K YGFDQNVDEPCVYK+I VAFLVLYVDDILLIGN
Subjt: EIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIGN
Query: DVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPTT
D+ Y
Subjt: DVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPTT
Query: ISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLTS
Subjt: ISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLTS
Query: PTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKM
L D+K WL+ +FQ+KDLGEAQYVLGIQIIR+RKNK LALSQ TYIDKM
Subjt: PTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKM
Query: LSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVYG
L RY M NSK+GLLPFRHGVHLSKEQC KTPQE+EDMRRIPYAS VGSLMYVMLCTRP+I YAVGI+SRYQSNP LDHWTAVK ILKYLRRTRDY LVYG
Subjt: LSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVYG
Query: SKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSKE
+KDLILTGYT+ DFQTDK SRKSTSGSVFTLNGG VVWRSIKQGCIA TMEAEYVAACEAAKEAVWLRKFL DLEVVPN+NL ITLYCDNSGAVAN KE
Subjt: SKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSKE
Query: PRSHKRGKHIE
PRSHKRGK E
Subjt: PRSHKRGKHIE
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-297 | 52.15 | Show/hide |
Query: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMN
SS++QL+ +MTL+VGTG++ISA+ VGD K+ ++ LD RLVKNGLL++L+D +LPPCESCLEGKMTKRPFTGKGY AKEPLEL+H+DLCGPMN
Subjt: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMN
Query: VRARGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI-----------------------------------------------
V+ARGG+EYFISFIDDYSR TEVENLL K IKI
Subjt: VRARGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI-----------------------------------------------
Query: ------------------------------------------------PEL-----------------------------------------FDRTWN--
P L FD N
Subjt: ------------------------------------------------PEL-----------------------------------------FDRTWN--
Query: LVSTLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPL
VST +T + ++ STRVVD E GPS+RV DE +TSGQ+HPSQ LRMPRRSG VV QP RYLGL ET VIPD GVEDPL
Subjt: LVSTLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPL
Query: TFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIAT
+++ AMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPI CKWIYKRKRD+AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSIRILL IAT
Subjt: TFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIAT
Query: FYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDIL
FYDYEIWQMDVK AFLNGNL+E+IFMSQP+GF+TQGQEQKVCKL RSI+GLKQ SRSWNI+FDT +KSYGFDQNVDEPCVYK+I VAFLVLYVDDIL
Subjt: FYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDIL
Query: LIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQP
LIGNDV Y
Subjt: LIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQP
Query: PPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSES
Subjt: PPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSES
Query: SLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATY
L D+K WL+ +FQ+KDLGEAQYVLGIQIIR+RKNKTLALSQATY
Subjt: SLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATY
Query: IDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYH
IDK+L RY M NSK+GLLPFRHGVHLSKEQ PKTPQE+EDMRRIPYAS VGSLMY MLCTRPDI YAVGI+SRYQSNP LDHWTAVK +LKYLRRTRDY
Subjt: IDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYH
Query: LVYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVA
LVYG+KDLILTGYT+SDFQTDK SRKSTSGSVFTLNGGAVVWRSIKQGCIA STMEAEYVAACEAAKEAVWLRKFL DLEVVPN+NL ITLYCDNSGAVA
Subjt: LVYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVA
Query: NSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
NSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTK+AS HNIADPFTK LTAKVFEGHL+ LG
Subjt: NSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 4.5e-264 | 48.92 | Show/hide |
Query: RLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRARGGYEYFISFIDDYSR---------------------TEVEN
RLVKNGLLS+LE+ +LP CESCLEGKMTKRPFTGKG+ AKEPLELVH+DLCGPMNV+ARGG+EYFI+F DDYSR EVEN
Subjt: RLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRARGGYEYFISFIDDYSR---------------------TEVEN
Query: LLGKTIK--------------------------------------IPELFDRT---------------------------------------------WN
L KTIK + E +RT WN
Subjt: LLGKTIK--------------------------------------IPELFDRT---------------------------------------------WN
Query: -------------------------------------------------------LVSTLSTRV----VDEVGPSTRVV-DEPSSE-AGPSTRVADEPS-
VST +T + + E P +++V +E S E PSTRV +EPS
Subjt: -------------------------------------------------------LVSTLSTRV----VDEVGPSTRVV-DEPSSE-AGPSTRVADEPS-
Query: --------TSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCK
+S + H Q LR PRRSG V P RY+ L ET TVI DG +EDPLTF+ AM DVD D+W+KAM+LE+ESMYFN VWDLVD P+GVKPI CK
Subjt: --------TSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCK
Query: WIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRR
WIYKRKR A GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILL IA ++DYEIWQMDVK AFLNGNL+E I+M QP+GF+ GQEQK+CKL R
Subjt: WIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRR
Query: SIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNP
SI+GLKQ SRSWNI+FDT +KSYGFDQ VDEPCVYKRIIN SVAFLVLYVDDILLIGND+
Subjt: SIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNP
Query: LPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIV
Subjt: LPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIV
Query: IHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQ
Subjt: IHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQ
Query: KSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPY
+L DIK+WL+T+FQ+KDLGEAQ+VLGIQI R+RKNK LALSQA+YIDK++ +Y M NSKRGLLPFRHGV LSKEQCPKTPQ++E+MR IPY
Subjt: KSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPY
Query: ASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIK
AS VGSLMY MLCTRPDI YAVGI+SRYQSNP L HWTAVK ILKYLRRTRDY LVYGSKDLILTGYT+SDFQTD+ SRKSTSGSVFTLNGGAVVWRSIK
Subjt: ASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIK
Query: QGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFT
QGCIA STMEAEYVAACEAAKEAVWLR FL+DLEVVPN++ ITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV RGDVIVT++AS HN+ADPFT
Subjt: QGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFT
Query: KALTAKVFEGHLKGLG
K LTAKVFEGHL+ LG
Subjt: KALTAKVFEGHLKGLG
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| A0A5A7T2V9 Gag/pol protein | 7.8e-285 | 48.21 | Show/hide |
Query: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSR-------------------------EH-----------------------------YML------
SS++QL+ +MTL+VGTG++ISA+ VGD K+FF EH Y+L
Subjt: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSR-------------------------EH-----------------------------YML------
Query: -------------------------------------LDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRA
LD RLVK+GLL++L+D +LPPCESCLEGKMTKRPFTGKGY AKEPLEL+H+DLCGPMNV+A
Subjt: -------------------------------------LDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRA
Query: RGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI--------------------------------------------------
RG +EYFISFIDDYSR TEVENLL K IKI
Subjt: RGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI--------------------------------------------------
Query: ---------------------------------------------PEL-----------------------------------------FDRTWN--LVS
P L FD N VS
Subjt: ---------------------------------------------PEL-----------------------------------------FDRTWN--LVS
Query: TLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFR
T +T + ++ STRVVD E GPS+RV DE +TSGQ+HPSQ LRMPRRSG VV QP RYLGL ET VIPD GVEDPL+++
Subjt: TLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFR
Query: HAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYD
AMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPI CKWIYKRKRD+AGKVQTFKARLVAKGYT+KEGVDYEETFS VAMLKSIRILL IA FYD
Subjt: HAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYD
Query: YEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIG
YEIWQMDVK AFLNGNL+E+IFMSQP+GF+TQGQEQKVCKL RSI+GLKQ SRSWNI+FDT +KSYGFDQNVDEPCVYK+I VAFLVLYVDDILLIG
Subjt: YEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIG
Query: NDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPT
NDV Y
Subjt: NDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPT
Query: TISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLT
Subjt: TISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLT
Query: SPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDK
L D+K WL+ +FQ+KDLGE QYVLGIQIIR+RKNKTLALSQATYIDK
Subjt: SPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDK
Query: MLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVY
+L RY M NSK+GLLPFRHGVHLSKEQ PKTPQE+EDMRRIPYAS VGSLMY MLCTRPDI YAVGI+SRYQSNP LDHWTAVK ILKYLRRTRDY LVY
Subjt: MLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVY
Query: GSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSK
G+KDLILTGYTNSDFQTDK SRKSTS SVFTLNGGAVVWRSIKQGCIA STMEAEYVAACEAAKEAVWL+KFL DLEVVPN+NL ITLYCDNSGAVANSK
Subjt: GSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSK
Query: EPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
EPRSHKRGKHIERKYHLIREIVQRGDVIVTK+AS HNIADPFTK LTAKVFEGHL+ LG
Subjt: EPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
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| A0A5A7TZD0 Gag/pol protein | 6.8e-289 | 48.61 | Show/hide |
Query: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSR-------------------------EH-----------------------------YML------
SS++QL+ +MTL+VGTG++ISA+ VGD K+FF EH Y+L
Subjt: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSR-------------------------EH-----------------------------YML------
Query: -------------------------------------LDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRA
LD RLVKNGLL++L+D +LPPCESCLEGKMTKRPFTGKGY AKEPLEL+H+DLCGPMNV+A
Subjt: -------------------------------------LDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRA
Query: RGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI--------------------------------------------------
RGG+EYFISFIDDYSR TEVENLL K IKI
Subjt: RGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI--------------------------------------------------
Query: ---------------------------------------------PEL-----------------------------------------FDRTWN--LVS
P L FD N VS
Subjt: ---------------------------------------------PEL-----------------------------------------FDRTWN--LVS
Query: TLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFR
T +T + ++ STRVVD E GPS+RV DE +TSGQ+HPSQ LRMPRRSG VV QP RYLGL ET VIPD GVEDPL+++
Subjt: TLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFR
Query: HAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYD
AMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPI CKWIYKRKRD+AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSIRILL IATFYD
Subjt: HAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYD
Query: YEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIG
YEIWQMDVK AFLNGNL+E+IFMSQP+GF+TQGQEQKVCKL RSI+GLKQ SRSWNI+FDT +KSYGFDQNVDEPCVYK+I VAFLVLYVDDILLIG
Subjt: YEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIG
Query: NDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPT
NDV Y
Subjt: NDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPT
Query: TISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLT
Subjt: TISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLT
Query: SPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDK
L D+K WL+ +FQ+KDLGEAQYVLGIQIIR+RKNKTLALSQATYIDK
Subjt: SPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDK
Query: MLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVY
+L RY M NSK+GLLPFRHGVHLSKEQ PKTPQE+EDMRRIPYAS VGSLMY MLCTRPDI YAVGI+SRYQSNP LDHWTAVK +LKYLRRTRDY LVY
Subjt: MLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVY
Query: GSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSK
G+KDLILTGYT+SDFQTDK SRKSTSGSVFTLNGGAVVWRSIKQGCIA STMEAEYVAACEAAKEAVWLRKFL DLEVVPN+NL ITLYCDNSGAVANSK
Subjt: GSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSK
Query: EPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
EPRSHKRGKHIERKYHLIREIVQRGDVIVTK+AS HNIADPFTK LTAKVFEGHL+ LG
Subjt: EPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
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| A0A5A7U7T0 Gag/pol protein | 7.6e-272 | 53.61 | Show/hide |
Query: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMN
SS++QL+ +MTL VGTG++ISA+VVGD K+ ++ LD RLVKNGLL++L+D +LPPCESCLEGKMTKRPFTGKGY AKEPLEL+H+ LCGPMN
Subjt: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMN
Query: VRARGGYEYFISFIDDYSRTEVENLLGKTIKIPELFDRTWNLVSTLST----------------------------------------------RVV---
V+ARGG+EYFIS +DDYSR +LG LFDRTWN + TLST RV
Subjt: VRARGGYEYFISFIDDYSRTEVENLLGKTIKIPELFDRTWNLVSTLST----------------------------------------------RVV---
Query: ----------------------DEVGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFRH
+ STRVVD E GPS+RV DE +TSGQ+HPSQ LRMP+RSG +V QP RYLGL ET VIPD GVEDPL+++
Subjt: ----------------------DEVGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFRH
Query: AMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYDY
AMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPI CKWIYKRKRD+AGKVQTFKARLVAKGYTQ+EGVDYEETFS VAML+SIRILL IATFYDY
Subjt: AMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYDY
Query: EIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIGN
EIW+MDVK A LNGNL+E+IFMSQ +GF+TQGQEQKVCKL RSI+GLKQ SRSWNI+FDT +K YGFDQNVDEPCVYK+I VAFLVLYVDDILLIGN
Subjt: EIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIGN
Query: DVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPTT
D+ Y
Subjt: DVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPTT
Query: ISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLTS
Subjt: ISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLTS
Query: PTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKM
L D+K WL+ +FQ+KDLGEAQYVLGIQIIR+RKNK LALSQ TYIDKM
Subjt: PTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKM
Query: LSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVYG
L RY M NSK+GLLPFRHGVHLSKEQC KTPQE+EDMRRIPYAS VGSLMYVMLCTRP+I YAVGI+SRYQSNP LDHWTAVK ILKYLRRTRDY LVYG
Subjt: LSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVYG
Query: SKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSKE
+KDLILTGYT+ DFQTDK SRKSTSGSVFTLNGG VVWRSIKQGCIA TMEAEYVAACEAAKEAVWLRKFL DLEVVPN+NL ITLYCDNSGAVAN KE
Subjt: SKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSKE
Query: PRSHKRGKHIE
PRSHKRGK E
Subjt: PRSHKRGKHIE
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| A0A5A7UYE8 Gag/pol protein | 1.8e-297 | 52.15 | Show/hide |
Query: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMN
SS++QL+ +MTL+VGTG++ISA+ VGD K+ ++ LD RLVKNGLL++L+D +LPPCESCLEGKMTKRPFTGKGY AKEPLEL+H+DLCGPMN
Subjt: SSWQQLDAGKMTLRVGTGELISAKVVGDIKMFFSREHYMLLDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMN
Query: VRARGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI-----------------------------------------------
V+ARGG+EYFISFIDDYSR TEVENLL K IKI
Subjt: VRARGGYEYFISFIDDYSR---------------------TEVENLLGKTIKI-----------------------------------------------
Query: ------------------------------------------------PEL-----------------------------------------FDRTWN--
P L FD N
Subjt: ------------------------------------------------PEL-----------------------------------------FDRTWN--
Query: LVSTLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPL
VST +T + ++ STRVVD E GPS+RV DE +TSGQ+HPSQ LRMPRRSG VV QP RYLGL ET VIPD GVEDPL
Subjt: LVSTLSTRVVDE----------------VGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPL
Query: TFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIAT
+++ AMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPI CKWIYKRKRD+AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSIRILL IAT
Subjt: TFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIAT
Query: FYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDIL
FYDYEIWQMDVK AFLNGNL+E+IFMSQP+GF+TQGQEQKVCKL RSI+GLKQ SRSWNI+FDT +KSYGFDQNVDEPCVYK+I VAFLVLYVDDIL
Subjt: FYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDIL
Query: LIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQP
LIGNDV Y
Subjt: LIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQP
Query: PPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSES
Subjt: PPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSES
Query: SLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATY
L D+K WL+ +FQ+KDLGEAQYVLGIQIIR+RKNKTLALSQATY
Subjt: SLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATY
Query: IDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYH
IDK+L RY M NSK+GLLPFRHGVHLSKEQ PKTPQE+EDMRRIPYAS VGSLMY MLCTRPDI YAVGI+SRYQSNP LDHWTAVK +LKYLRRTRDY
Subjt: IDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYH
Query: LVYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVA
LVYG+KDLILTGYT+SDFQTDK SRKSTSGSVFTLNGGAVVWRSIKQGCIA STMEAEYVAACEAAKEAVWLRKFL DLEVVPN+NL ITLYCDNSGAVA
Subjt: LVYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVA
Query: NSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
NSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTK+AS HNIADPFTK LTAKVFEGHL+ LG
Subjt: NSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 5.4e-57 | 23.96 | Show/hide |
Query: PLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFI
P +F D W +A++ E+ + N W + PE + +W++ K + G +KARLVA+G+TQK +DYEETF+PVA + S R +L +
Subjt: PLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFI
Query: ATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVY---KRIINTSVAFLVLY
Y+ ++ QMDVK AFLNG L E I+M P+G VCKL ++I+GLKQ +R W F+ +K F + + C+Y K IN ++ +++LY
Subjt: ATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVY---KRIINTSVAFLVLY
Query: VDDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRR
VDD+++ D+ ++N
Subjt: VDDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRR
Query: LHTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYY
Subjt: LHTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYY
Query: KDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLAL
K++L +F++ DL E ++ +GI+I + + L
Subjt: KDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLAL
Query: SQATYIDKMLSRYKMHNSKRGLLPFRHGVHL----SKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILK
SQ+ Y+ K+LS++ M N P ++ S E C P S +G LMY+MLCTRPD+ AV I+SRY S + W +K +L+
Subjt: SQATYIDKMLSRYKMHNSKRGLLPFRHGVHL----SKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILK
Query: YLRRTRDYHLVYGSKDLI----LTGYTNSDFQTDKASRKSTSGSVFTL-NGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLN
YL+ T D L++ K+L + GY +SD+ + RKST+G +F + + + W + +Q +A S+ EAEY+A EA +EA+WL+ L + + L
Subjt: YLRRTRDYHLVYGSKDLI----LTGYTNSDFQTDKASRKSTSGSVFTL-NGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLN
Query: LRITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVF
I +Y DN G ++ + P HKR KHI+ KYH RE VQ + + + + + +AD FTK L A F
Subjt: LRITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVF
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| P0CV72 Secreted RxLR effector protein 161 | 1.8e-28 | 48.12 | Show/hide |
Query: MRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVYGSKDLI-LTGYTNSDFQTDKASRKSTSGSVFTLNGGA
M+ +PY S VG++MY+M+ TRPD+ AVG++S++ S+P HW A+K +L+YL+ T+ Y L + L GY+++D+ D SR+STSG +F LNGG
Subjt: MRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHLVYGSKDLI-LTGYTNSDFQTDKASRKSTSGSVFTLNGGA
Query: VVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWL
V WRS KQ +A S+ E EY+A EA +EAVWL
Subjt: VVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-100 | 29.45 | Show/hide |
Query: DYSRTEVENLLGKTIKIPELFDRTWNLVSTLSTRVVDEVGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTV
D S ++ + IP + + ST T V E G V E + + P+ + H Q L RRS ++ RY E +
Subjt: DYSRTEVENLLGKTIKIPELFDRTWNLVSTLSTRVVDEVGPSTRVVDEPSSEAGPSTRVADEPSTSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTV
Query: IPDGGVEDPLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLK
D +P + + ++ + +Q +KAM EMES+ N + LV+LP+G +P++CKW++K K+D K+ +KARLV KG+ QK+G+D++E FSPV +
Subjt: IPDGGVEDPLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLK
Query: SIRILLFIATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVY-KRIINTSV
SIR +L +A D E+ Q+DVK AFL+G+L+E I+M QP+GF G++ VCKL +S++GLKQ R W +KFD+ +KS + + +PCVY KR +
Subjt: SIRILLFIATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVY-KRIINTSV
Query: AFLVLYVDDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATV
L+LYVDD+L++G D
Subjt: AFLVLYVDDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATV
Query: ADSSRRLHTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDV
Subjt: ADSSRRLHTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDV
Query: LSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRK
KG ++A +K LS F +KDLG AQ +LG++I+R R
Subjt: LSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRK
Query: NKTLALSQATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNI
++ L LSQ YI+++L R+ M N+K P + LSK+ CP T +E +M ++PY+S VGSLMY M+CTRPDI +AVG++SR+ NP +HW AVK I
Subjt: NKTLALSQATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNI
Query: LKYLRRTRDYHLVYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRI
L+YLR T L +G D IL GYT++D D +RKS++G +FT +GGA+ W+S Q C+A ST EAEY+AA E KE +WL++FL +L +
Subjt: LKYLRRTRDYHLVYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRI
Query: TLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFE
+YCD+ A+ SK H R KHI+ +YH IRE+V + V K+++ N AD TK + FE
Subjt: TLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-11 | 31.75 | Show/hide |
Query: GELISAKVVGDIKMFFSREHYMLLDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRARGGYEYFISFIDDY
GEL +A+ + ++ R +M L K L+S + T+ PC+ CL GK + F L+LV++D+CGPM + + GG +YF++FIDD
Subjt: GELISAKVVGDIKMFFSREHYMLLDNDWRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKGYCAKEPLELVHTDLCGPMNVRARGGYEYFISFIDDY
Query: SRTEVENLLGKTIKIPELFDRTWNLV
SR +L ++ ++F + LV
Subjt: SRTEVENLLGKTIKIPELFDRTWNLV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-52 | 24.52 | Show/hide |
Query: PSTRVVDEPSSEAGPSTRVADEP------STSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFRHAMNDVDHDQWVKAMDLEMES
P+T +S PS + P + + QA P M R+ +I+P LA + +P T A+ D ++W AM E+ +
Subjt: PSTRVVDEPSSEAGPSTRVADEP------STSGQAHPSQELRMPRRSGMVVIQPERYLGLAETPTVIPDGGVEDPLTFRHAMNDVDHDQWVKAMDLEMES
Query: MYFNQVWDLVDLPEG-VKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYDYEIWQMDVKIAFLNGNLDEN
N WDLV P V + C+WI+ +K ++ G + +KARLVAKGY Q+ G+DY ETFSPV SIRI+L +A + I Q+DV AFL G L ++
Subjt: MYFNQVWDLVDLPEG-VKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIATFYDYEIWQMDVKIAFLNGNLDEN
Query: IFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIGNDVEYLHNKKFKFCRRFFSR
++MSQP GF+ + + VCKLR++++GLKQ R+W ++ + + GF +V + ++ S+ ++++YVDDIL+ GND LHN
Subjt: IFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYVDDILLIGNDVEYLHNKKFKFCRRFFSR
Query: WQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPTTISPPSIVVVGFLDYQSPPL
Subjt: WQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRLHTQPPPTTISPPSIVVVGFLDYQSPPL
Query: PFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQ
T+ N SQ
Subjt: PFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQ
Query: KGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKMLSRYKMHNSKRGLLPFRHG
F +KD E Y LGI+ R L LSQ YI +L+R M +K P
Subjt: KGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKMLSRYKMHNSKRGLLPFRHG
Query: VHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHL-VYGSKDLILTGYTNSDFQTDK
LS K E Y VGSL Y+ TRPDI YAV +S++ P +H A+K IL+YL T ++ + + L L Y+++D+ DK
Subjt: VHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHL-VYGSKDLILTGYTNSDFQTDK
Query: ASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIR
ST+G + L + W S KQ + S+ EAEY + + E W+ L +L + L +YCDN GA P H R KHI YH IR
Subjt: ASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIR
Query: EIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
VQ G + V V++ +AD TK L+ F+ +G
Subjt: EIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-53 | 24.64 | Show/hide |
Query: DPLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLV-DLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILL
+P T AM D D+W +AM E+ + N WDLV P V + C+WI+ +K ++ G + +KARLVAKGY Q+ G+DY ETFSPV SIRI+L
Subjt: DPLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLV-DLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILL
Query: FIATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYV
+A + I Q+DV AFL G L + ++MSQP GFV + + VC+LR++I+GLKQ R+W ++ T + + GF ++ + ++ S+ ++++YV
Subjt: FIATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVTQGQEQKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFLVLYV
Query: DDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRL
DDIL+ GND
Subjt: DDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADSSRRL
Query: HTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYK
Subjt: HTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSDFYYK
Query: DSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALS
V+L LS F +K+ + Y LGI+ R + L LS
Subjt: DSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALS
Query: QATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRT
Q Y +L+R M +K P L+ K P E Y VGSL Y+ TRPD+ YAV +S+Y P DHW A+K +L+YL T
Subjt: QATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKYLRRT
Query: RDYHL-VYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDN
D+ + + L L Y+++D+ D ST+G + L + W S KQ + S+ EAEY + + E W+ L +L + L+ +YCDN
Subjt: RDYHL-VYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITLYCDN
Query: SGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
GA P H R KHI YH IR VQ G + V V++ +AD TK L+ F+ + +G
Subjt: SGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKVASAHNIADPFTKALTAKVFEGHLKGLG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G79640.1 Protein kinase superfamily protein | 3.6e-08 | 39.56 | Show/hide |
Query: NETEKNAANGGTIGNTSQAV--DDVLSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVA-SFIQQKSHNMQIL
++T++ NG T V DDV ++ K +++ ++ +E D+K+K P++QQ+G KVTSEN+D++K VA S I QKSH+MQ+L
Subjt: NETEKNAANGGTIGNTSQAV--DDVLSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVA-SFIQQKSHNMQIL
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| AT1G79640.2 Protein kinase superfamily protein | 3.6e-08 | 39.56 | Show/hide |
Query: NETEKNAANGGTIGNTSQAV--DDVLSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVA-SFIQQKSHNMQIL
++T++ NG T V DDV ++ K +++ ++ +E D+K+K P++QQ+G KVTSEN+D++K VA S I QKSH+MQ+L
Subjt: NETEKNAANGGTIGNTSQAV--DDVLSDFYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVA-SFIQQKSHNMQIL
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.8e-50 | 24.04 | Show/hide |
Query: EDPLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILL
++P T+ A + W AMD E+ +M W++ LP KPI CKW+YK K ++ G ++ +KARLVAKGYTQ+EG+D+ ETFSPV L S++++L
Subjt: EDPLTFRHAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILL
Query: FIATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVT-QGQE---QKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFL
I+ Y++ + Q+D+ AFLNG+LDE I+M P G+ QG VC L++SI+GLKQ SR W +KF T+ +GF Q+ + + +I T +
Subjt: FIATFYDYEIWQMDVKIAFLNGNLDENIFMSQPKGFVT-QGQE---QKVCKLRRSIFGLKQTSRSWNIKFDTTVKSYGFDQNVDEPCVYKRIINTSVAFL
Query: VLYVDDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADS
++YVDDI++ N
Subjt: VLYVDDILLIGNDVEYLHNKKFKFCRRFFSRWQKIGQKSPSRQPYFPRHHIFNPLPSTIVDSSRRLRSQPLPPTLLVASVHILHRQLFSSPLFTATVADS
Query: SRRLHTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSD
Subjt: SRRLHTQPPPTTISPPSIVVVGFLDYQSPPLPFHILLVLFLLHLVAGAFLSSIVIHSFFLPLFCCRALPCHYPLNETEKNAANGGTIGNTSQAVDDVLSD
Query: FYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKT
ND DE +K L + F+++DLG +Y LG++I R+
Subjt: FYYKDSESSLTSPTTNDEEQDEKAKAPIIQQKGCCKVTSENVDVDKAVASFIQQKSHNMQILVVLADIKKWLSTEFQIKDLGEAQYVLGIQIIRNRKNKT
Query: LALSQATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKY
+ + Q Y +L + K +P V S + + D + Y +G LMY+ + TR DI +AV +S++ P L H AV IL Y
Subjt: LALSQATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPDIFYAVGIISRYQSNPELDHWTAVKNILKY
Query: LRRTRDYHLVYGSK-DLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITL
++ T L Y S+ ++ L ++++ FQ+ K +R+ST+G L + W+S KQ ++ S+ EAEY A A E +WL +F +L++ L+ L
Subjt: LRRTRDYHLVYGSK-DLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAACEAAKEAVWLRKFLMDLEVVPNLNLRITL
Query: YCDNSGAVANSKEPRSHKRGKHIERKYHLIRE
+CDN+ A+ + H+R KHIE H +RE
Subjt: YCDNSGAVANSKEPRSHKRGKHIERKYHLIRE
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.2e-16 | 31.1 | Show/hide |
Query: LSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPD
LS+ F +KDLG Y LGIQI + L LSQ Y +++L+ M + K P ++ S K P + + S VG+L Y+ L TRPD
Subjt: LSTEFQIKDLGEAQYVLGIQIIRNRKNKTLALSQATYIDKMLSRYKMHNSKRGLLPFRHGVHLSKEQCPKTPQEIEDMRRIPYASTVGSLMYVMLCTRPD
Query: IFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHL-VYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAA
I YAV I+ + P L + +K +L+Y++ T + L ++ + L + + +SD+ ++R+ST+G L + W + +Q ++ S+ E EY A
Subjt: IFYAVGIISRYQSNPELDHWTAVKNILKYLRRTRDYHL-VYGSKDLILTGYTNSDFQTDKASRKSTSGSVFTLNGGAVVWRSIKQGCIAYSTMEAEYVAA
Query: CEAAKEAVW
A E W
Subjt: CEAAKEAVW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.2e-13 | 40.7 | Show/hide |
Query: WVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIA
W +AM E++++ N+ W LV P + CKW++K K + G + KARLVAKG+ Q+EG+ + ET+SPV +IR +L +A
Subjt: WVKAMDLEMESMYFNQVWDLVDLPEGVKPIRCKWIYKRKRDAAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLFIA
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