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Lag0022143 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022143
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr7:19661487..19662084
RNA-Seq ExpressionLag0022143
SyntenyLag0022143
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.4e-1444.27Show/hide
Query:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL
        +TRSRS+GI I+       +A  I K + ES K  + +K+N L+      S R     +P V+SVMMA++  +  MAEMERK NL        DHEI  L
Subjt:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL

Query:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED
        K Q+Q RET ESSQTP    +DKGK V+ E+
Subjt:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]3.4e-1444.27Show/hide
Query:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL
        +TRSRS+GI I+       +A  I K + ES K  + +K+N L+      S R     +P V+SVMMA++  +  MAEMERK NL        DHEI  L
Subjt:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL

Query:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED
        K Q+Q RET ESSQTP    +DKGK V+ E+
Subjt:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]3.4e-1444.27Show/hide
Query:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL
        +TRSRS+GI I+       +A  I K + ES K  + +K+N L+      S R     +P V+SVMMA++  +  MAEMERK NL        DHEI  L
Subjt:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL

Query:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED
        K Q+Q RET ESSQTP    +DKGK V+ E+
Subjt:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]3.4e-1444.27Show/hide
Query:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL
        +TRSRS+GI I+       +A  I K + ES K  + +K+N L+      S R     +P V+SVMMA++  +  MAEMERK NL        DHEI  L
Subjt:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL

Query:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED
        K Q+Q RET ESSQTP    +DKGK V+ E+
Subjt:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]3.4e-1444.27Show/hide
Query:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL
        +TRSRS+GI I+       +A  I K + ES K  + +K+N L+      S R     +P V+SVMMA++  +  MAEMERK NL        DHEI  L
Subjt:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL

Query:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED
        K Q+Q RET ESSQTP    +DKGK V+ E+
Subjt:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED

TrEMBL top hitse value%identityAlignment
A0A5A7TFN2 Ty3-gypsy retrotransposon protein2.8e-1442.75Show/hide
Query:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL
        +TRSRS+GI  ++D     VA RI K + ES K  + +K+N L+++    S + K   +P V SVMMA++  +  M EMERK N         DHEIT  
Subjt:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL

Query:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED
        + Q++ RET ESSQTP     DKGK V+ E+
Subjt:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED

A0A5A7U8B3 Ty3-gypsy retrotransposon protein4.0e-1341.22Show/hide
Query:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL
        +T SRS+GI  ++D     VA  I + + ES K  + +K+N L+++   TS + K   +P V+SV+MA++  +  MAEMERK N         DHEIT L
Subjt:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL

Query:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED
        + Q++ RET E SQTP     DKGK V+ E+
Subjt:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED

A0A5A7UF60 Ty3-gypsy retrotransposon protein4.7e-1443.51Show/hide
Query:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL
        +TRSRS+GI  ++D    VV S I K + ES K  + +K N L+++    S   K   +P V+SVMMA++  +  MAEME+K N         DHEIT L
Subjt:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL

Query:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED
        + Q++ RET ESSQTP     DKGK V+ E+
Subjt:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED

A0A5A7VCU1 Ty3-gypsy retrotransposon protein1.4e-1342.75Show/hide
Query:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL
        +TR+RS+GI  ++D    V  S I K + ES K  + +K+N L+++    S + K   +P V+SVMM ++  +  MAEMERK N         DHEIT L
Subjt:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL

Query:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED
        + Q+Q RETVESSQT      DKGK V+ E+
Subjt:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.8e-1442.75Show/hide
Query:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL
        +TRSRS+GI  ++D     VA  I K + ES K  + +K+N L+++   +S + K   +P V+SVMMA++  +  MAEMERK N         DHEI  L
Subjt:  VTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHVLSVMMANMDQDERMAEMERKFNL--------DHEITYL

Query:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED
        + Q++ RET ESSQTP     DKGK V+ E+
Subjt:  KNQLQNRETVESSQTPTAGKNDKGKVVMHED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCTGGTTTAAAAGGAAAAAAAAGCTTGGATAACGCGCATGAAGCTGGAATCAAACTCACGCATGCTCTTGGAGACGTTCAGGGGGGTTGGAAGGGGGGGCTCGA
GCCCCCCTGGACCTACTGTAGCTCCGTCACTGCTGTCACTCGTAGTCGTTCCCAAGGAATTGAGATCAAGGAGGATCACACTCCTCTCGTTGTTGCAAGTAGGATCTCAA
AATTGATTGAAGAATCCTCTAAGGACAAGGTTGCAGTCAAAGACAACATATTGTTCGAATCTATCACTCCAACATCTGAACGACCAAAGGACACACTAAATCCTCATGTG
TTGTCTGTCATGATGGCTAATATGGACCAAGATGAAAGAATGGCAGAGATGGAAAGAAAATTCAATCTCGATCATGAGATTACCTATTTGAAGAACCAGCTACAAAATCG
AGAAACGGTTGAGTCTAGCCAGACCCCTACTGCAGGAAAGAATGATAAGGGGAAGGTCGTCATGCATGAGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCTGGTTTAAAAGGAAAAAAAAGCTTGGATAACGCGCATGAAGCTGGAATCAAACTCACGCATGCTCTTGGAGACGTTCAGGGGGGTTGGAAGGGGGGGCTCGA
GCCCCCCTGGACCTACTGTAGCTCCGTCACTGCTGTCACTCGTAGTCGTTCCCAAGGAATTGAGATCAAGGAGGATCACACTCCTCTCGTTGTTGCAAGTAGGATCTCAA
AATTGATTGAAGAATCCTCTAAGGACAAGGTTGCAGTCAAAGACAACATATTGTTCGAATCTATCACTCCAACATCTGAACGACCAAAGGACACACTAAATCCTCATGTG
TTGTCTGTCATGATGGCTAATATGGACCAAGATGAAAGAATGGCAGAGATGGAAAGAAAATTCAATCTCGATCATGAGATTACCTATTTGAAGAACCAGCTACAAAATCG
AGAAACGGTTGAGTCTAGCCAGACCCCTACTGCAGGAAAGAATGATAAGGGGAAGGTCGTCATGCATGAGGATTAG
Protein sequenceShow/hide protein sequence
MQAGLKGKKSLDNAHEAGIKLTHALGDVQGGWKGGLEPPWTYCSSVTAVTRSRSQGIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNILFESITPTSERPKDTLNPHV
LSVMMANMDQDERMAEMERKFNLDHEITYLKNQLQNRETVESSQTPTAGKNDKGKVVMHED