CuGenDBv2

Gene ID	Lag0022156
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	CASP-like protein
Genome location	chr7:19830805..19833897
RNA-Seq Expression	Lag0022156
Synteny	Lag0022156
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0016192 - vesicle-mediated transport (biological process) GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0030117 - membrane coat (cellular component) GO:0005198 - structural molecule activity (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6578643.1 CASP-like protein 4A1, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-24

70.53

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Query:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG
        +KDPS   HSPSNSSDF DHTC  HG+SSI+DALSIT LEDLPP+  PPSPRP+  +  Q TEPIVVTKV+AEIQGVRKVEEG       SDGDG
Subjt:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG

KAG7016184.1 CASP-like protein 4A1 [Cucurbita argyrosperma subsp. argyrosperma]

2.3e-24

70.53

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Query:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG
        +KDPS   HSPSNSSDF DHTC  HG+SSI+DALSIT LEDLPP+  PPSPRP+  +  Q TEPIVVTKV+AEIQGVRKVEEG       SDGDG
Subjt:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG

XP_022938613.1 CASP-like protein 4A1 [Cucurbita moschata]

2.3e-24

70.53

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Query:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG
        +KDPS   HSPSNSSDF DHTC  HG+SSI+DALSIT LEDLPP+  PPSPRP+  +  Q TEPIVVTKV+AEIQGVRKVEEG       SDGDG
Subjt:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG

XP_023550770.1 CASP-like protein 4A1 [Cucurbita pepo subsp. pepo]

2.3e-24

70.53

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Query:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG
        +KDPS   HSPSNSSDF DHTC  HG+SSI+DALSIT LEDLPP+  PPSPRP+  +  Q TEPIVVTKV+AEIQGVRKVEEG       SDGDG
Subjt:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG

XP_038890250.1 CASP-like protein 4A1 [Benincasa hispida]

1.4e-26

75.56

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Query:  TSKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEGSDGDGD
        +SKDPS   HSPS SSDF DHTCH HG+SSI+DALSIT LEDLPP+ NPPSPRP+  +  Q TEPIVVTKV+AEIQGVRKVEE SD DGD
Subjt:  TSKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEGSDGDGD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KS01 CASP-like protein

1.3e-20

65.22

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Query:  TSKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLED--LPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEGSDGDGD
        T+KDPS   HSPS SSDF DHTCH+ G+SSI+ ALSIT L+D  LPP+ N PSPRP+  +  Q +EPIVVTKV+ EIQG+RKVEE  D DGD
Subjt:  TSKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLED--LPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEGSDGDGD

A0A1S3C844 CASP-like protein

1.3e-20

65.56

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Query:  TSKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEGSDGDGD
        TSKDPS   HSPS SSDF DHTCH+ G+SSI+D      ++DLPP+ NPPSPRP+  +  Q +EPIVVTKV+ EIQGVRKVEE SD DGD
Subjt:  TSKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEGSDGDGD

A0A5A7T7H8 CASP-like protein

1.3e-20

65.56

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Query:  TSKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEGSDGDGD
        TSKDPS   HSPS SSDF DHTCH+ G+SSI+D      ++DLPP+ NPPSPRP+  +  Q +EPIVVTKV+ EIQGVRKVEE SD DGD
Subjt:  TSKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEGSDGDGD

A0A6J1FJD7 CASP-like protein

1.1e-24

70.53

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Query:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG
        +KDPS   HSPSNSSDF DHTC  HG+SSI+DALSIT LEDLPP+  PPSPRP+  +  Q TEPIVVTKV+AEIQGVRKVEEG       SDGDG
Subjt:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG

A0A6J1JTE4 CASP-like protein

2.1e-23

68.42

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Query:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG
        SKDPS   HSPSN+SDF DHTC  HG+SSI+DALSIT LEDL P++ PPSPRP+  +  Q +EPIVVTKV+AEIQGVRKVEEG       SDGDG
Subjt:  SKDPSSSTHSPSNSSDFFDHTCHAHGHSSINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEG-------SDGDG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAAAAAACCATGCTTCGTCTTCCCATATGTTCATTTTTTTCATCTCTTCCCAGCCACACTTCGTCTTTGCTTCAACTTGTTCCAACCAGTCGCGCTTCATCTTCGTCT
GGCTTCGTCTTCGTCTTCTTCAACTGGCTTCGTCTTCGTCTGCCATCTTCGTCTTCTCTTCTTAGTTATCCGCTTGCTCCTTTCTTGTTCTTCTTTTGCTTCATCTTCGC
TCGGAATGGCATGGATCTCCCCGACCAGCAAAGATCCCTCGTCGTCGACCCACTCTCCGTCCAACTCCTCTGATTTCTTCGATCACACCTGTCACGCTCATGGTCACTCC
TCCATTAACGATGCTCTTTCCATTACATCGCTCGAGGACCTGCCACCAACGACTAATCCTCCATCTCCGAGACCTTTGGTGGTGAGCAGCACGCAGCAGACGGAGCCGAT
TGTGGTGACGAAGGTCGAAGCTGAAATACAGGGAGTACGGAAAGTGGAAGAGGGAAGTGATGGCGATGGCGATAACGATGTAGAGAGTTTAAGGATTAAATTTTTTCATT
TATGA

mRNA sequence

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Protein sequence

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MKKPCFVFPYVHFFHLFPATLRLCFNLFQPVALHLRLASSSSSSTGFVFVCHLRLLFLVIRLLLSCSSFASSSLGMAWISPTSKDPSSSTHSPSNSSDFFDHTCHAHGHS
SINDALSITSLEDLPPTTNPPSPRPLVVSSTQQTEPIVVTKVEAEIQGVRKVEEGSDGDGDNDVESLRIKFFHL

Lag0022156 (gene) of Sponge gourd (AG-4) v1 genome