; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022157 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022157
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:19857847..19865721
RNA-Seq ExpressionLag0022157
SyntenyLag0022157
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4368373.1 hypothetical protein F8388_019090 [Cannabis sativa]1.9e-0727.33Show/hide
Query:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTL-FPRVDEAIQVGNNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID
        M+++P C++C +Q  T+ H L  C + K I   + + +  E +  G+ F D ++     L  SEFE A    WAIW +RN   +   VM+      WI+ 
Subjt:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTL-FPRVDEAIQVGNNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID

Query:  YWESTSTKERHHPKTDVIDTHNLQM---PRCSVQLFTDAAIGKSNIGAGYGALILDLDGKV
         +  +++ + +  K  +   H  Q    P   + +  DAA+     G G G +  D +GK+
Subjt:  YWESTSTKERHHPKTDVIDTHNLQM---PRCSVQLFTDAAIGKSNIGAGYGALILDLDGKV

KAF4376283.1 hypothetical protein G4B88_008415 [Cannabis sativa]1.0e-0825.91Show/hide
Query:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVG-NNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID
        M+++P+C++C     T+ H L  C + K++   L P   +  ++G  +  D +  L   L  +EFE A    WAIW +RN   +   VM+      W+  
Subjt:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVG-NNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID

Query:  YWESTSTKERHHPKTDVIDTHN---LQMPRC-SVQLFTDAAIGKSNIGAGYGALILDLDGKVCGA-MEYMDPTPHSPLAKTCCLVQIDSKYAR
         +   S+ +    K  +    N    Q P    + +  DAA+  + IG G G +  D  G V  A M Y+  +    +A+T  +++   K+ R
Subjt:  YWESTSTKERHHPKTDVIDTHN---LQMPRC-SVQLFTDAAIGKSNIGAGYGALILDLDGKVCGA-MEYMDPTPHSPLAKTCCLVQIDSKYAR

KAF4399153.1 hypothetical protein G4B88_023747 [Cannabis sativa]2.3e-0828.21Show/hide
Query:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID
        MD++  C++C  Q  T+ H L GC + K I   L P   +     N +  D ++ L  +L  SEFE+A    WAIW +RN + +   VM+      WI  
Subjt:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID

Query:  -YWESTSTKERHHPKTDVIDTHN------LQMPRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSPLAKTCCLVQIDSKYA
         Y +S ++KE    +T  ID  +      ++ P   + +  DAA+     G G G +  D +G  +   M Y          ++CC V++   +A
Subjt:  -YWESTSTKERHHPKTDVIDTHN------LQMPRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSPLAKTCCLVQIDSKYA

KAF4401718.1 hypothetical protein G4B88_000766 [Cannabis sativa]1.3e-0828.72Show/hide
Query:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWI-I
        MD++  C++C  Q  T+ H L GC + K I   L P   +     N +  D ++ L  +L  SEFE+A    WAIW +RN + +   VM+      WI  
Subjt:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWI-I

Query:  DYWESTSTKERHHPKTDVIDTHNLQM------PRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSPLAKTCCLVQIDSKYA
         Y +S + KE+  P    ID  + Q+      P  ++ +  DAA+     G G G +  D +G  +   M Y          ++CC V++   +A
Subjt:  DYWESTSTKERHHPKTDVIDTHNLQM------PRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSPLAKTCCLVQIDSKYA

XP_030509188.1 uncharacterized protein LOC115723863 [Cannabis sativa]1.9e-0727.75Show/hide
Query:  SPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGNNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIIDY---
        SP C+IC S E +I+H L  C RAK + +     +D      +  AD ++ L+  L  SEFE   +  W  W++RN+  H   V   +    +   Y   
Subjt:  SPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGNNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIIDY---

Query:  WESTSTKERH---------HPKTDVIDTHNLQM---PRCSVQLFTDAAIGKSNIGAGYGALILDLDGKVCGAM
        +++   K             P+     TH  +    P+  ++L TDAAI K+    G GA + + DG +  A+
Subjt:  WESTSTKERH---------HPKTDVIDTHNLQM---PRCSVQLFTDAAIGKSNIGAGYGALILDLDGKVCGAM

TrEMBL top hitse value%identityAlignment
A0A7J6FZV2 RNase H domain-containing protein4.9e-0925.91Show/hide
Query:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVG-NNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID
        M+++P+C++C     T+ H L  C + K++   L P   +  ++G  +  D +  L   L  +EFE A    WAIW +RN   +   VM+      W+  
Subjt:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVG-NNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID

Query:  YWESTSTKERHHPKTDVIDTHN---LQMPRC-SVQLFTDAAIGKSNIGAGYGALILDLDGKVCGA-MEYMDPTPHSPLAKTCCLVQIDSKYAR
         +   S+ +    K  +    N    Q P    + +  DAA+  + IG G G +  D  G V  A M Y+  +    +A+T  +++   K+ R
Subjt:  YWESTSTKERHHPKTDVIDTHN---LQMPRC-SVQLFTDAAIGKSNIGAGYGALILDLDGKVCGA-MEYMDPTPHSPLAKTCCLVQIDSKYAR

A0A7J6HVA4 Uncharacterized protein1.1e-0828.21Show/hide
Query:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID
        MD++  C++C  Q  T+ H L GC + K I   L P   +     N +  D ++ L  +L  SEFE+A    WAIW +RN + +   VM+      WI  
Subjt:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID

Query:  -YWESTSTKERHHPKTDVIDTHN------LQMPRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSPLAKTCCLVQIDSKYA
         Y +S ++KE    +T  ID  +      ++ P   + +  DAA+     G G G +  D +G  +   M Y          ++CC V++   +A
Subjt:  -YWESTSTKERHHPKTDVIDTHN------LQMPRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSPLAKTCCLVQIDSKYA

A0A7J6I3Y4 Uncharacterized protein6.4e-0928.72Show/hide
Query:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWI-I
        MD++  C++C  Q  T+ H L GC + K I   L P   +     N +  D ++ L  +L  SEFE+A    WAIW +RN + +   VM+      WI  
Subjt:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWI-I

Query:  DYWESTSTKERHHPKTDVIDTHNLQM------PRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSPLAKTCCLVQIDSKYA
         Y +S + KE+  P    ID  + Q+      P  ++ +  DAA+     G G G +  D +G  +   M Y          ++CC V++   +A
Subjt:  DYWESTSTKERHHPKTDVIDTHNLQM------PRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSPLAKTCCLVQIDSKYA

A0A803PJK4 Uncharacterized protein4.9e-0926.4Show/hide
Query:  SPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGNNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQ----VMDWRDQCGWIID
        S +C++C+    +I H L  CKRAK++       +D  I   + F D     +      E E+     W+IW +RN   H  +     M       ++ +
Subjt:  SPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGNNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQ----VMDWRDQCGWIID

Query:  YWESTST------KERHHPKTDVIDTHNLQMPRCSVQLFTDAAIGKSNIGAGYGALILDLDGKVCGAMEYMDPTPHSP
        Y  S          E H      +    L  P   ++L TDAA+   N  +G+GA++ D DG+V  AM    P    P
Subjt:  YWESTST------KERHHPKTDVIDTHNLQMPRCSVQLFTDAAIGKSNIGAGYGALILDLDGKVCGAMEYMDPTPHSP

A0A803PR93 Uncharacterized protein6.4e-0928.72Show/hide
Query:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWI-I
        MD++  C++C  Q  T+ H L GC + K I   L P   +     N +  D ++ L  +L  SEFE+A    WAIW +RN + +   VM+      WI  
Subjt:  MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWI-I

Query:  DYWESTSTKERHHPKTDVIDTHNLQM------PRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSPLAKTCCLVQIDSKYA
         Y +S + KE+  P    ID  + Q+      P  ++ +  DAA+     G G G +  D +G  +   M Y          ++CC V++   +A
Subjt:  DYWESTSTKERHHPKTDVIDTHNLQM------PRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSPLAKTCCLVQIDSKYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGTCACCCATGTGTAATATATGCAAATCACAAGAGGGGACTATTGACCATACTTTATGTGGTTGTAAGCGTGCCAAAAGAATATGTGATACACTATTCCCACG
CGTGGATGAGGCCATCCAAGTAGGAAATAATTTTGCGGATCGGATTATATGGCTTGCTAGAAACCTCATGAATAGTGAATTTGAGAAAGCATGCATTACTTTTTGGGCCA
TATGGAACGACAGGAATAGTTTTTGTCATAATTGTCAAGTCATGGATTGGAGGGATCAGTGTGGATGGATTATTGATTATTGGGAGAGTACAAGCACAAAAGAAAGGCAT
CATCCAAAGACGGATGTGATCGATACACACAATTTACAAATGCCAAGATGTTCTGTTCAGTTATTTACTGATGCAGCAATTGGAAAAAGTAATATAGGTGCCGGATATGG
GGCTCTTATCCTTGATTTGGATGGCAAGGTTTGTGGTGCAATGGAGTATATGGATCCCACACCTCATTCTCCATTGGCAAAAACTTGTTGCCTTGTGCAAATTGATTCTA
AATATGCAAGAAAAACCCACAAATACACGTGCAAGTGCACACGATCAGCAGCAAGTCGTATGGAAATATCCAACGCTACTGTTTATTCAGATTCGTTAGTAGCTGTTAAT
ATGATTCGAGGTGAACTTCAACCTCCAAAAAAAACTGTGAGTCTTCGTGAAGTCGCCCGTGAGTCTCCCTTTTCCTCTCTCCCTCATTTTCTCTCCGGCCGCCGTCTTCT
CCCCGCTGCTTGCAACCACGAAGTAGCCGCCGCCCGCTGCTTGCAACCACAGAGTCGTTGCCACCTGCTAAGAAGAAGACGTGTGCCGCCCTGGGCGTTACATTCCATTC
TTTTCCCGATGCGTTGTTTCCTCAACCTTGCAATTCCTTCTTCTCTCCCAGTTGACTCTCATTCCACTGTTTCTGATAATGAGTGTTACGCCCTCCATTCTCTTACACTC
TCATGGAACAAAAAAAATGGTAATTTTGGACCACTCCGAAATATAAGGAATTGGCCAGAACAGCAAAGCACCAGCCCGAAGACACGACTAGGAAACGGACCCCGAAGGAG
AGATAGGTCGAAGAGTTGGGCCAAGGTCGAGGCCAACCATCGACCCACTTGTGTGGGTCGAGTTTCCTCTCCCTCCGTTCGGTTCTGGTGTCAGGGGTCATCCCGGTTCG
ACTTGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGTCACCCATGTGTAATATATGCAAATCACAAGAGGGGACTATTGACCATACTTTATGTGGTTGTAAGCGTGCCAAAAGAATATGTGATACACTATTCCCACG
CGTGGATGAGGCCATCCAAGTAGGAAATAATTTTGCGGATCGGATTATATGGCTTGCTAGAAACCTCATGAATAGTGAATTTGAGAAAGCATGCATTACTTTTTGGGCCA
TATGGAACGACAGGAATAGTTTTTGTCATAATTGTCAAGTCATGGATTGGAGGGATCAGTGTGGATGGATTATTGATTATTGGGAGAGTACAAGCACAAAAGAAAGGCAT
CATCCAAAGACGGATGTGATCGATACACACAATTTACAAATGCCAAGATGTTCTGTTCAGTTATTTACTGATGCAGCAATTGGAAAAAGTAATATAGGTGCCGGATATGG
GGCTCTTATCCTTGATTTGGATGGCAAGGTTTGTGGTGCAATGGAGTATATGGATCCCACACCTCATTCTCCATTGGCAAAAACTTGTTGCCTTGTGCAAATTGATTCTA
AATATGCAAGAAAAACCCACAAATACACGTGCAAGTGCACACGATCAGCAGCAAGTCGTATGGAAATATCCAACGCTACTGTTTATTCAGATTCGTTAGTAGCTGTTAAT
ATGATTCGAGGTGAACTTCAACCTCCAAAAAAAACTGTGAGTCTTCGTGAAGTCGCCCGTGAGTCTCCCTTTTCCTCTCTCCCTCATTTTCTCTCCGGCCGCCGTCTTCT
CCCCGCTGCTTGCAACCACGAAGTAGCCGCCGCCCGCTGCTTGCAACCACAGAGTCGTTGCCACCTGCTAAGAAGAAGACGTGTGCCGCCCTGGGCGTTACATTCCATTC
TTTTCCCGATGCGTTGTTTCCTCAACCTTGCAATTCCTTCTTCTCTCCCAGTTGACTCTCATTCCACTGTTTCTGATAATGAGTGTTACGCCCTCCATTCTCTTACACTC
TCATGGAACAAAAAAAATGGTAATTTTGGACCACTCCGAAATATAAGGAATTGGCCAGAACAGCAAAGCACCAGCCCGAAGACACGACTAGGAAACGGACCCCGAAGGAG
AGATAGGTCGAAGAGTTGGGCCAAGGTCGAGGCCAACCATCGACCCACTTGTGTGGGTCGAGTTTCCTCTCCCTCCGTTCGGTTCTGGTGTCAGGGGTCATCCCGGTTCG
ACTTGGTTTAG
Protein sequenceShow/hide protein sequence
MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGNNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIIDYWESTSTKERH
HPKTDVIDTHNLQMPRCSVQLFTDAAIGKSNIGAGYGALILDLDGKVCGAMEYMDPTPHSPLAKTCCLVQIDSKYARKTHKYTCKCTRSAASRMEISNATVYSDSLVAVN
MIRGELQPPKKTVSLREVARESPFSSLPHFLSGRRLLPAACNHEVAAARCLQPQSRCHLLRRRRVPPWALHSILFPMRCFLNLAIPSSLPVDSHSTVSDNECYALHSLTL
SWNKKNGNFGPLRNIRNWPEQQSTSPKTRLGNGPRRRDRSKSWAKVEANHRPTCVGRVSSPSVRFWCQGSSRFDLV