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Lag0022183 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022183
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr7:20537844..20540426
RNA-Seq ExpressionLag0022183
SyntenyLag0022183
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051565.1 protein Ycf2-like [Cucumis melo var. makuwa]3.1e-1437.14Show/hide
Query:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF
        LSTPPN +A RI +  PRI NWAA++QP+WKDL+ +VF S  LEV P++AT  E+   +FA F+E E+  L   +++++K K      S+ +    PS  
Subjt:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF

Query:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK
        +I  L + ++ IE +Q+ M   ++ L+  +  +   M N+
Subjt:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]1.8e-1434.78Show/hide
Query:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF
        LSTPPN +A RI +  PRI NWAA+ QP+WKDL+ +VF SP LEV P++AT  E+   +FA F E E+  L   +++++KNK      S+ +    PS  
Subjt:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF

Query:  DIINLGERLKTIEKNQ---ETMIRRMDELVSTINLMVDYMRNKDNSGDETGTEVDMEQRDDIVTYFHKVTEDIDDEIIRSIDED
        +I  L + ++ IE +Q   ET +  + E + ++ L +      +N  +E G     E  D       KV ED +++ +  ++ D
Subjt:  DIINLGERLKTIEKNQ---ETMIRRMDELVSTINLMVDYMRNKDNSGDETGTEVDMEQRDDIVTYFHKVTEDIDDEIIRSIDED

TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]3.1e-1437.14Show/hide
Query:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF
        LSTPPN +A RI +  PRI NWAA++QP+WKDL+ +VF S  LEV P++AT  E+   +FA F+E E+  L   +++++K K      S+ +    PS  
Subjt:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF

Query:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK
        +I  L + ++ IE +Q+ M   ++ L+  +  +   M N+
Subjt:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK

TYK23192.1 protein Ycf2-like [Cucumis melo var. makuwa]8.2e-1534.78Show/hide
Query:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF
        LSTPPN +A RI +  PRI NWAA+ QP+WKDL+ +VF SP LEV P++AT  E+   +FA F E E+  L   +++++KNK      S+ +    PS  
Subjt:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF

Query:  DIINLGERLKTIEKNQ---ETMIRRMDELVSTINLMVDYMRNKDNSGDETGTEVDMEQRDDIVTYFHKVTEDIDDEIIRSIDED
        +I  L + ++ IE +Q   ET +  + E + ++ L +      +N  +E G     E  D       KV ED +++ +  ++ D
Subjt:  DIINLGERLKTIEKNQ---ETMIRRMDELVSTINLMVDYMRNKDNSGDETGTEVDMEQRDDIVTYFHKVTEDIDDEIIRSIDED

TYK30414.1 protein Ycf2-like [Cucumis melo var. makuwa]1.5e-1336.43Show/hide
Query:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF
        LSTPPN  A RI +  PRI NWAA+ QP+WKDL+ +VF SP LEV P++AT  E+   YFA F+E E+  L   +++++K K       + +    PS  
Subjt:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF

Query:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK
         I  L + +  IE +Q+ M   ++ ++  +  +   + N+
Subjt:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK

TrEMBL top hitse value%identityAlignment
A0A5A7UD30 Protein Ycf2-like1.5e-1437.14Show/hide
Query:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF
        LSTPPN +A RI +  PRI NWAA++QP+WKDL+ +VF S  LEV P++AT  E+   +FA F+E E+  L   +++++K K      S+ +    PS  
Subjt:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF

Query:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK
        +I  L + ++ IE +Q+ M   ++ L+  +  +   M N+
Subjt:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK

A0A5D3CEX9 Protein Ycf2-like8.8e-1534.78Show/hide
Query:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF
        LSTPPN +A RI +  PRI NWAA+ QP+WKDL+ +VF SP LEV P++AT  E+   +FA F E E+  L   +++++KNK      S+ +    PS  
Subjt:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF

Query:  DIINLGERLKTIEKNQ---ETMIRRMDELVSTINLMVDYMRNKDNSGDETGTEVDMEQRDDIVTYFHKVTEDIDDEIIRSIDED
        +I  L + ++ IE +Q   ET +  + E + ++ L +      +N  +E G     E  D       KV ED +++ +  ++ D
Subjt:  DIINLGERLKTIEKNQ---ETMIRRMDELVSTINLMVDYMRNKDNSGDETGTEVDMEQRDDIVTYFHKVTEDIDDEIIRSIDED

A0A5D3DCN3 Protein Ycf2-like1.5e-1437.14Show/hide
Query:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF
        LSTPPN +A RI +  PRI NWAA++QP+WKDL+ +VF S  LEV P++AT  E+   +FA F+E E+  L   +++++K K      S+ +    PS  
Subjt:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF

Query:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK
        +I  L + ++ IE +Q+ M   ++ L+  +  +   M N+
Subjt:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK

A0A5D3DHZ2 Protein Ycf2-like4.0e-1534.78Show/hide
Query:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF
        LSTPPN +A RI +  PRI NWAA+ QP+WKDL+ +VF SP LEV P++AT  E+   +FA F E E+  L   +++++KNK      S+ +    PS  
Subjt:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF

Query:  DIINLGERLKTIEKNQ---ETMIRRMDELVSTINLMVDYMRNKDNSGDETGTEVDMEQRDDIVTYFHKVTEDIDDEIIRSIDED
        +I  L + ++ IE +Q   ET +  + E + ++ L +      +N  +E G     E  D       KV ED +++ +  ++ D
Subjt:  DIINLGERLKTIEKNQ---ETMIRRMDELVSTINLMVDYMRNKDNSGDETGTEVDMEQRDDIVTYFHKVTEDIDDEIIRSIDED

A0A5D3E3E8 Protein Ycf2-like7.5e-1436.43Show/hide
Query:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF
        LSTPPN  A RI +  PRI NWAA+ QP+WKDL+ +VF SP LEV P++AT  E+   YFA F+E E+  L   +++++K K       + +    PS  
Subjt:  LSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLE-EEVALHMRDEKVQKNKVPHSETSILVKNYEPSNF

Query:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK
         I  L + +  IE +Q+ M   ++ ++  +  +   + N+
Subjt:  DIINLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACTTTACATATGGATGAAGTGTCTTAGTACCCCTCCAAATAAATATGCAAGAAGAATTGGAAGTGGAACTCCCAGGATAGCAAATTGGGCAGCGGAACTACAACC
AGAATGGAAAGATCTTGAAGCACAAGTATTTTGTTCTCCAAAGTTGGAGGTTGTTCCCCTTGTGGCAACTGCAAAGGAGCTTCAAAAGTCATATTTTGCATCATTCCTAG
AAGAAGAAGTTGCTTTGCATATGAGGGATGAAAAAGTACAAAAAAATAAGGTCCCACACTCTGAAACGAGCATTCTAGTGAAAAATTATGAACCATCAAATTTTGATATC
ATTAATTTAGGAGAACGTCTTAAAACTATAGAAAAGAATCAAGAAACAATGATTAGACGAATGGATGAATTAGTTAGTACAATCAATCTAATGGTGGACTATATGAGAAA
TAAAGATAATAGTGGAGACGAAACGGGAACTGAAGTGGATATGGAACAACGAGATGATATTGTGACATACTTTCATAAGGTGACAGAAGATATAGACGACGAAATTATAC
GATCAATTGATGAAGATAAAGTTTATGAAAATTTGAGCAGATTGAAGAAGGGAAAGAACATTATACAGATAAAGACAAATATCGATCCCATGCACCAGAAGGGTGAGAGA
ATGGTTGAAAAGGATGTTGGTTCAACTGTAGCTTCGACTGGTATTTATATTGAAGCCTTAAAGGGGAACTATAAGCTTCCTCTTCCGGGAAAACATCCTAGAGGATATCT
CGAGCCCTCATTCGAACTTTTTAGCCAGCCAGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGACTTTACATATGGATGAAGTGTCTTAGTACCCCTCCAAATAAATATGCAAGAAGAATTGGAAGTGGAACTCCCAGGATAGCAAATTGGGCAGCGGAACTACAACC
AGAATGGAAAGATCTTGAAGCACAAGTATTTTGTTCTCCAAAGTTGGAGGTTGTTCCCCTTGTGGCAACTGCAAAGGAGCTTCAAAAGTCATATTTTGCATCATTCCTAG
AAGAAGAAGTTGCTTTGCATATGAGGGATGAAAAAGTACAAAAAAATAAGGTCCCACACTCTGAAACGAGCATTCTAGTGAAAAATTATGAACCATCAAATTTTGATATC
ATTAATTTAGGAGAACGTCTTAAAACTATAGAAAAGAATCAAGAAACAATGATTAGACGAATGGATGAATTAGTTAGTACAATCAATCTAATGGTGGACTATATGAGAAA
TAAAGATAATAGTGGAGACGAAACGGGAACTGAAGTGGATATGGAACAACGAGATGATATTGTGACATACTTTCATAAGGTGACAGAAGATATAGACGACGAAATTATAC
GATCAATTGATGAAGATAAAGTTTATGAAAATTTGAGCAGATTGAAGAAGGGAAAGAACATTATACAGATAAAGACAAATATCGATCCCATGCACCAGAAGGGTGAGAGA
ATGGTTGAAAAGGATGTTGGTTCAACTGTAGCTTCGACTGGTATTTATATTGAAGCCTTAAAGGGGAACTATAAGCTTCCTCTTCCGGGAAAACATCCTAGAGGATATCT
CGAGCCCTCATTCGAACTTTTTAGCCAGCCAGAAGAGTGA
Protein sequenceShow/hide protein sequence
MRLYIWMKCLSTPPNKYARRIGSGTPRIANWAAELQPEWKDLEAQVFCSPKLEVVPLVATAKELQKSYFASFLEEEVALHMRDEKVQKNKVPHSETSILVKNYEPSNFDI
INLGERLKTIEKNQETMIRRMDELVSTINLMVDYMRNKDNSGDETGTEVDMEQRDDIVTYFHKVTEDIDDEIIRSIDEDKVYENLSRLKKGKNIIQIKTNIDPMHQKGER
MVEKDVGSTVASTGIYIEALKGNYKLPLPGKHPRGYLEPSFELFSQPEE