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Lag0022194 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022194
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:20695637..20696200
RNA-Seq ExpressionLag0022194
SyntenyLag0022194
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.2e-2643.48Show/hide
Query:  MVKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYC
        + KP  M FR  + WVHF DL +   N++MA RLGN IG F++ +     F W   L+VR   D+  PLHRGIK++LD P+G  W  I+YE+LPD   +C
Subjt:  MVKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYC

Query:  GRIGHGSKDCTFSFQDDDISLLHQEYGMWMAFIGRSSS
        GR+ H  KDC+    D     L  +YG W+ F G  +S
Subjt:  GRIGHGSKDCTFSFQDDDISLLHQEYGMWMAFIGRSSS

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]5.7e-3149.61Show/hide
Query:  FRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCGRIGHGSK
        F    FW+H  DLPM   N++MA RLGN IG F + D   +GF W  SL++R +IDIT PL RGIK+++D P+G  W  I+YE+LPD C +CG IGH S 
Subjt:  FRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCGRIGHGSK

Query:  DCTFSF---QDDDISLLHQEYGMWMAFIG
        DC   +   QDD  S    EYG W+ F+G
Subjt:  DCTFSF---QDDDISLLHQEYGMWMAFIG

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]2.6e-2033.85Show/hide
Query:  VKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCG
        V+P+ +   +  FWVH C+LP+ L N+ + + +GN +GQF + D    G  W  ++ +R  +D+  PL RG+K++L   +  +W   KYE+LP  C +CG
Subjt:  VKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCG

Query:  RIGHGSKDCTFSFQDDDISLLHQ-EYGMWM
        R+GH  ++C       D + +   +YG W+
Subjt:  RIGHGSKDCTFSFQDDDISLLHQ-EYGMWM

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]2.0e-2033.56Show/hide
Query:  VKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCG
        V+P+ +      FWVH C+LP+ L N+ + E +GN +GQF + D    G  W  ++++R  +D+  PL RG+K++L      +W   KYE+LP  C +CG
Subjt:  VKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCG

Query:  RIGHGSKDCTFSFQDDDISLLHQ-EYGMWMAFIGRSSSVFRSPNSSPMG
        R+GH  ++C       D S +   +YG W+      S   R   S   G
Subjt:  RIGHGSKDCTFSFQDDDISLLHQ-EYGMWMAFIGRSSSVFRSPNSSPMG

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]4.5e-2034.87Show/hide
Query:  VKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLD--DPLGSVWALIKYEKLPDICSY
        V+P+ +      FWVH C+LP+ L N+ + + +GN +GQF + D    G  W  ++++R  ID+  PL RG+K++L   DP   +W   KYE+LP  C +
Subjt:  VKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLD--DPLGSVWALIKYEKLPDICSY

Query:  CGRIGHGSKDC--TFSFQDDDISLLHQEYGMWMAFIGRSSSVFRSPNSSPMG
        CGR+GH  ++C    SF  D   +   +YG W+      S   R   S   G
Subjt:  CGRIGHGSKDC--TFSFQDDDISLLHQEYGMWMAFIGRSSSVFRSPNSSPMG

TrEMBL top hitse value%identityAlignment
A0A2N9HME7 Uncharacterized protein4.1e-1935.77Show/hide
Query:  VKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCG
        V+P+ +      FWV   DLP    NR + ER+G  +G+    D   +G GW + L+VR I+D+T PL RG K+ L     S+W   KYE+LP  C  CG
Subjt:  VKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCG

Query:  RIGHGSKDCTFSFQDDDISLLHQEYGMWMAFIGRSSS
        RI HG   C  + Q    +    ++G W+  +  ++S
Subjt:  RIGHGSKDCTFSFQDDDISLLHQEYGMWMAFIGRSSS

A0A5C7H9Y2 CCHC-type domain-containing protein2.4e-1934.16Show/hide
Query:  KPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCGR
        K T + FR+  FW+   +LP+   NR +   LG  +GQ +E D G  G    + +++R +ID+ +PL RG++V+L D       +I YE+LP+ C YCG+
Subjt:  KPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCGR

Query:  IGHGSKDCTFSFQDDDISLLHQEYGMWMAFIGRSSS-----VFRSPNSSPMGTNRLLMENL
        IGH  +DC  + ++   S    ++G WM  + R+ S        SP  S  G +   +ENL
Subjt:  IGHGSKDCTFSFQDDDISLLHQEYGMWMAFIGRSSS-----VFRSPNSSPMGTNRLLMENL

A0A6J1BSZ1 uncharacterized protein LOC1110054811.6e-2643.48Show/hide
Query:  MVKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYC
        + KP  M FR  + WVHF DL +   N++MA RLGN IG F++ +     F W   L+VR   D+  PLHRGIK++LD P+G  W  I+YE+LPD   +C
Subjt:  MVKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYC

Query:  GRIGHGSKDCTFSFQDDDISLLHQEYGMWMAFIGRSSS
        GR+ H  KDC+    D     L  +YG W+ F G  +S
Subjt:  GRIGHGSKDCTFSFQDDDISLLHQEYGMWMAFIGRSSS

A0A6J1DU55 uncharacterized protein LOC1110231352.7e-3149.61Show/hide
Query:  FRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCGRIGHGSK
        F    FW+H  DLPM   N++MA RLGN IG F + D   +GF W  SL++R +IDIT PL RGIK+++D P+G  W  I+YE+LPD C +CG IGH S 
Subjt:  FRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCGRIGHGSK

Query:  DCTFSF---QDDDISLLHQEYGMWMAFIG
        DC   +   QDD  S    EYG W+ F+G
Subjt:  DCTFSF---QDDDISLLHQEYGMWMAFIG

A0A6J1DX30 uncharacterized protein LOC1110248743.7e-2037.31Show/hide
Query:  MVKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYC
        ++ P+ + F     WV F DLP+    R MA RLGN +G F+E D       W  +L+VR ++DI+ PL RGIK++LD P+G  W  I+YE+LPD C +C
Subjt:  MVKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYC

Query:  GRIGHGSKDCTFSFQDDDISLLHQEYGMWMAFIG
        G      K                +YG W+ + G
Subjt:  GRIGHGSKDCTFSFQDDDISLLHQEYGMWMAFIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAGCCAACAACCATGCTCTTTCGGTTTGCAACATTTTGGGTGCACTTCTGCGATCTCCCTATGGATCTTTATAACCGATCAATGGCGGAGCGTTTGGGCAACGA
GATTGGTCAATTTCAAGAATATGATATTGGTGGTCGGGGCTTCGGTTGGAAGGAGAGTCTCAAAGTTCGTACCATTATCGATATCACTCATCCCCTTCATCGTGGTATAA
AAGTTTCCCTAGATGATCCGTTGGGCAGTGTTTGGGCTCTTATCAAATACGAAAAGCTCCCCGATATTTGCTCCTACTGTGGGCGAATAGGACATGGATCCAAGGACTGC
ACTTTCTCCTTTCAGGACGACGACATCTCTCTTCTGCACCAGGAATATGGTATGTGGATGGCCTTCATAGGCAGATCCTCCAGTGTGTTTCGGTCACCAAATTCCAGTCC
CATGGGCACTAACAGATTGTTGATGGAGAACCTGACTGATCTGAACGGTGTCCTCACCACAGCTCAATTCGCAGCCTCTGAACATGTGACAAACACGGACGACCAGGACG
ATCACCCCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAGCCAACAACCATGCTCTTTCGGTTTGCAACATTTTGGGTGCACTTCTGCGATCTCCCTATGGATCTTTATAACCGATCAATGGCGGAGCGTTTGGGCAACGA
GATTGGTCAATTTCAAGAATATGATATTGGTGGTCGGGGCTTCGGTTGGAAGGAGAGTCTCAAAGTTCGTACCATTATCGATATCACTCATCCCCTTCATCGTGGTATAA
AAGTTTCCCTAGATGATCCGTTGGGCAGTGTTTGGGCTCTTATCAAATACGAAAAGCTCCCCGATATTTGCTCCTACTGTGGGCGAATAGGACATGGATCCAAGGACTGC
ACTTTCTCCTTTCAGGACGACGACATCTCTCTTCTGCACCAGGAATATGGTATGTGGATGGCCTTCATAGGCAGATCCTCCAGTGTGTTTCGGTCACCAAATTCCAGTCC
CATGGGCACTAACAGATTGTTGATGGAGAACCTGACTGATCTGAACGGTGTCCTCACCACAGCTCAATTCGCAGCCTCTGAACATGTGACAAACACGGACGACCAGGACG
ATCACCCCCGTTGA
Protein sequenceShow/hide protein sequence
MVKPTTMLFRFATFWVHFCDLPMDLYNRSMAERLGNEIGQFQEYDIGGRGFGWKESLKVRTIIDITHPLHRGIKVSLDDPLGSVWALIKYEKLPDICSYCGRIGHGSKDC
TFSFQDDDISLLHQEYGMWMAFIGRSSSVFRSPNSSPMGTNRLLMENLTDLNGVLTTAQFAASEHVTNTDDQDDHPR