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Lag0022195 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022195
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr7:20707895..20710580
RNA-Seq ExpressionLag0022195
SyntenyLag0022195
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MQM14562.1 hypothetical protein [Colocasia esculenta]4.1e-1939.41Show/hide
Query:  QALAGEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVS
        Q   G  QP T AE +S AQ++   EE + + RAE+  Q     DK R  D    R R++    G    S  R RP              F  YTPL+V+
Subjt:  QALAGEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVS

Query:  PDQVLAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFVKGEE
        P+Q+LA + +   ++ P R+++ P +RD++KYC FHR+HGH T  C QL+DEIE LI+ GYL+ FV+  E
Subjt:  PDQVLAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFVKGEE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.4e-1940.49Show/hide
Query:  GEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQV
        G+  P T++E +SRAQ+Y++A E   SKR             G+R D   KR R  D+ QG        SR ++++   + +   KF KYTP +V  +QV
Subjt:  GEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQV

Query:  LAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFVK
        L  +    LLK P+R+K    +R K +YC FHR+HGHAT++C  L++E+E LIR GYLKE+V+
Subjt:  LAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFVK

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]2.9e-2040.74Show/hide
Query:  GEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQV
        G+  P T+AE +SRAQKY++AEE    K                 K+  GKR  ++ E  G    S    + D+    G+ +L  KF KYTP +V  +QV
Subjt:  GEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQV

Query:  LAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFV
        L  +    LLK P+ +K  P++R K +YC FHR+HGHAT +C  L++E+E LIR+GYLKE+V
Subjt:  LAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFV

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]2.9e-2036.36Show/hide
Query:  PRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRG-RPELRGKFGKYTPLSVSPDQVLAA
        P +Y+E ++RA+KY NAEE  K++  E+     +T  K ++ D+R +R+   D+     ++  G    ++ E R  RP L  +F  +T L+   +Q+L  
Subjt:  PRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRG-RPELRGKFGKYTPLSVSPDQVLAA

Query:  VHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFVKGEEGK
        V +  L + P  +KT P RR+ +KYCHFH++HGH T  C +L+++IESL+R+G L+E+V+  E +
Subjt:  VHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFVKGEEGK

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]9.8e-2139.02Show/hide
Query:  RTYAEFVSRAQKYINAEELMKSKR-AEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQVLAAV
        RT+ E +SRAQKY N +EL  +KR A  ++ RV   +K + K+E+ K                 + +  + E +G   L+ +F +YTPL++  +QVL  +
Subjt:  RTYAEFVSRAQKYINAEELMKSKR-AEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQVLAAV

Query:  HHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFVKGEEGK
         + DLL++P  +K  P+RRD+SKYC +HR+H H   +C  L++EI+SLI+ GYLKEFV+ + G+
Subjt:  HHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFVKGEEGK

TrEMBL top hitse value%identityAlignment
A0A6J1DWY0 uncharacterized protein LOC1110252936.9e-2040.49Show/hide
Query:  GEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQV
        G+  P T++E +SRAQ+Y++A E   SKR             G+R D   KR R  D+ QG        SR ++++   + +   KF KYTP +V  +QV
Subjt:  GEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQV

Query:  LAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFVK
        L  +    LLK P+R+K    +R K +YC FHR+HGHAT++C  L++E+E LIR GYLKE+V+
Subjt:  LAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFVK

A0A6J1DZ52 uncharacterized protein LOC1110256121.4e-2040.74Show/hide
Query:  GEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQV
        G+  P T+AE +SRAQKY++AEE    K                 K+  GKR  ++ E  G    S    + D+    G+ +L  KF KYTP +V  +QV
Subjt:  GEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQV

Query:  LAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFV
        L  +    LLK P+ +K  P++R K +YC FHR+HGHAT +C  L++E+E LIR+GYLKE+V
Subjt:  LAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFV

A0A6J1E1B3 uncharacterized protein LOC1110255214.5e-1936.75Show/hide
Query:  GEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKR-LREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQ
        GE+ P T+AE + +A+K I+ +EL+++K    E +    ID+GR   ++GK   + +D+            R D    R RP     + +YTP ++   +
Subjt:  GEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKR-LREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQ

Query:  VLAAVHHT---DLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFV
        +L  +  T    LLKRP +L+  P++R+K KYC FHR+HGH T NC +L+ +IE LI+ GY K+FV
Subjt:  VLAAVHHT---DLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFV

A0A7N2LNH8 Ribonuclease H3.8e-1837.42Show/hide
Query:  EDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREED--EDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQ
        ++ P+T +E + RA KY+NAE+ + S                 R+D   KR R+ED  +DQG  +  +G    D++E R    + G+F  +TPL+   DQ
Subjt:  EDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREED--EDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQ

Query:  VLAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFV
        VL  +     L  P +LK+ P +R + KYC FHR+HGH T +C  L+ +IE+LIR+G L++FV
Subjt:  VLAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFV

A0A7N2MG20 Ribonuclease H3.8e-1837.42Show/hide
Query:  EDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREED--EDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQ
        ++ P+T +E + RA KY+NAE+ + S                 R+D   KR R+ED  +DQG  +  +G    D++E R    + G+F  +TPL+   DQ
Subjt:  EDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERGKRLREED--EDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQ

Query:  VLAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFV
        VL  +     L  P +LK+ P +R + KYC FHR+HGH T +C  L+ +IE+LIR+G L++FV
Subjt:  VLAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKEFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAAGAAGCCTAGAGCATCAAATAGATTATGTTCCAAAGAAGCAAGAAAGATCTACTACCCCGACCTCAACTTCCACCACCCACGGCTGAAACACCAACCACCGCC
CACGGCTGAAACACCAACCACCACGACAAAGAACAACAGAGCACAACAAAAACAACTACCAACCCATGGCGAATCGGTGGGGTTTTCTTATCAAGGACGACACTCGTATT
TACGAACACTTTATTATTACTTGACCCGTGCGCTTGCGGTGCACCAGAGAGGAAGGACTTCAGACCCAGTTGAAACTGGCCCAAGGAAGAAGAGAACCACCAAAGGTGGA
CTTATACCTCAGCCTCGGCCCAAAGCCGAGGCCGAGGATCTGGTCGGCCTCGGCCCAATGCCGAGGCCGACCAGGCTAATCTGCCCGTTTGCTGTCAAGGCCACCTGGAT
CAGTCCCCCTGGGCCCAGGAGCAGGGAGTCACGTGCGGTGCACGACGCTAGGAGGAAACAAGCCCTAGCAGGGGAAGATCAACCGCGAACGTATGCTGAGTTCGTCTCTA
GGGCGCAGAAGTATATAAACGCGGAGGAGTTAATGAAGTCCAAGCGGGCGGAGAGAGAAGCGCAGAGGGTAACCACAATCGATAAGGGCAGAAGAAAAGATGAAAGGGGC
AAGAGGCTGCGGGAAGAGGACGAAGACCAGGGCCACCTTAGGTATTCCGTTGGTCGGAGTCGGCCAGACCAAAAGGAAGGCCGAGGCCGACCAGAGCTCAGGGGAAAGTT
TGGAAAGTACACTCCACTCTCTGTCTCACCAGACCAGGTTCTGGCTGCGGTTCACCACACAGATTTGTTGAAGCGTCCGGATAGACTGAAAACAGGCCCCGATAGAAGGG
ATAAGAGCAAATATTGTCACTTCCACCGGAATCATGGTCATGCAACACGCAATTGCATACAGCTTCGAGACGAGATAGAGAGTCTGATCAGGGAGGGGTATCTGAAGGAA
TTTGTGAAGGGGGAGGAAGGGAAGAAGCTGAAGCCGACCGGGGGGTCACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGAAGAAGCCTAGAGCATCAAATAGATTATGTTCCAAAGAAGCAAGAAAGATCTACTACCCCGACCTCAACTTCCACCACCCACGGCTGAAACACCAACCACCGCC
CACGGCTGAAACACCAACCACCACGACAAAGAACAACAGAGCACAACAAAAACAACTACCAACCCATGGCGAATCGGTGGGGTTTTCTTATCAAGGACGACACTCGTATT
TACGAACACTTTATTATTACTTGACCCGTGCGCTTGCGGTGCACCAGAGAGGAAGGACTTCAGACCCAGTTGAAACTGGCCCAAGGAAGAAGAGAACCACCAAAGGTGGA
CTTATACCTCAGCCTCGGCCCAAAGCCGAGGCCGAGGATCTGGTCGGCCTCGGCCCAATGCCGAGGCCGACCAGGCTAATCTGCCCGTTTGCTGTCAAGGCCACCTGGAT
CAGTCCCCCTGGGCCCAGGAGCAGGGAGTCACGTGCGGTGCACGACGCTAGGAGGAAACAAGCCCTAGCAGGGGAAGATCAACCGCGAACGTATGCTGAGTTCGTCTCTA
GGGCGCAGAAGTATATAAACGCGGAGGAGTTAATGAAGTCCAAGCGGGCGGAGAGAGAAGCGCAGAGGGTAACCACAATCGATAAGGGCAGAAGAAAAGATGAAAGGGGC
AAGAGGCTGCGGGAAGAGGACGAAGACCAGGGCCACCTTAGGTATTCCGTTGGTCGGAGTCGGCCAGACCAAAAGGAAGGCCGAGGCCGACCAGAGCTCAGGGGAAAGTT
TGGAAAGTACACTCCACTCTCTGTCTCACCAGACCAGGTTCTGGCTGCGGTTCACCACACAGATTTGTTGAAGCGTCCGGATAGACTGAAAACAGGCCCCGATAGAAGGG
ATAAGAGCAAATATTGTCACTTCCACCGGAATCATGGTCATGCAACACGCAATTGCATACAGCTTCGAGACGAGATAGAGAGTCTGATCAGGGAGGGGTATCTGAAGGAA
TTTGTGAAGGGGGAGGAAGGGAAGAAGCTGAAGCCGACCGGGGGGTCACAATGA
Protein sequenceShow/hide protein sequence
MRKKPRASNRLCSKEARKIYYPDLNFHHPRLKHQPPPTAETPTTTTKNNRAQQKQLPTHGESVGFSYQGRHSYLRTLYYYLTRALAVHQRGRTSDPVETGPRKKRTTKGG
LIPQPRPKAEAEDLVGLGPMPRPTRLICPFAVKATWISPPGPRSRESRAVHDARRKQALAGEDQPRTYAEFVSRAQKYINAEELMKSKRAEREAQRVTTIDKGRRKDERG
KRLREEDEDQGHLRYSVGRSRPDQKEGRGRPELRGKFGKYTPLSVSPDQVLAAVHHTDLLKRPDRLKTGPDRRDKSKYCHFHRNHGHATRNCIQLRDEIESLIREGYLKE
FVKGEEGKKLKPTGGSQ