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Lag0022198 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022198
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr7:20740534..20741142
RNA-Seq ExpressionLag0022198
SyntenyLag0022198
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033753.1 protein Ycf2-like [Cucumis melo var. makuwa]1.2e-0628.16Show/hide
Query:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES
        M+AT  ++GM  F PF++ E +  K  E++L K K   +I  ++ N+  P+             +ENS          I E   S+E K+N + +++ + 
Subjt:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES

Query:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQT
        +N ++E +K+++R  SG      + G+  FE+ LE++EE+Q+E + +  +  ++N   +  + DDED+D +G T
Subjt:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQT

KAA0035989.1 protein Ycf2-like [Cucumis melo var. makuwa]3.7e-0527.18Show/hide
Query:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES
        M+AT  E+GM  F PF++ E +  K  E++L K K   +I  ++ N+  P+             +ENS          I E    +E KLN + +++ + 
Subjt:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES

Query:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQG----QTQPTSLLRHSAISSYKLK
        +N ++E +++++   SG      + G+  FE+ L+++E++Q+E + E  + +++N   +  + DDED+  +G    +T PT+  + S  S YK+K
Subjt:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQG----QTQPTSLLRHSAISSYKLK

TYK23192.1 protein Ycf2-like [Cucumis melo var. makuwa]2.9e-0532.89Show/hide
Query:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTILENSYIRERGDSIESKLNRKLDQVIESINSLLEYLKTERRMMSGNASH
        M+AT +E+GM  F PF + E +  K  E++L K K   +I  ++ N+  P+  E + +R+  + IE    R    +  S+  LLE+LK+    M+     
Subjt:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTILENSYIRERGDSIESKLNRKLDQVIESINSLLEYLKTERRMMSGNASH

Query:  DIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQ
            G+  FE+ L+++EE+Q+E + E  + + +N R + GKRDD DED  G+
Subjt:  DIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQ

TYK30414.1 protein Ycf2-like [Cucumis melo var. makuwa]3.7e-0527.18Show/hide
Query:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES
        M+AT  E+GM  F PF++ E +  K  E++L K K   +I  ++ N+  P+             +ENS          I E    +E KLN + +++ + 
Subjt:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES

Query:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQG----QTQPTSLLRHSAISSYKLK
        +N ++E +++++   SG      + G+  FE+ L+++E++Q+E + E  + +++N   +  + DDED+  +G    +T PT+  + S  S YK+K
Subjt:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQG----QTQPTSLLRHSAISSYKLK

XP_038887714.1 cilia- and flagella-associated protein 251-like [Benincasa hispida]8.0e-0829.07Show/hide
Query:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI-----------------LENSYIRERGDSIESK---LNRKLDQVIESI
        ++AT +EM M+ F PF+++E +  + +EE++S+ +P   +V+L+ N+                      L N+ + E  D+++     L +K+D ++ES+
Subjt:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI-----------------LENSYIRERGDSIESK---LNRKLDQVIESI

Query:  NSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQ
          +++Y+KT +   S  ++ +++  +++FEKEL+ +E+EQ+E E E K   +A D     +R D+DED +GQ
Subjt:  NSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQ

TrEMBL top hitse value%identityAlignment
A0A5A7STD7 Protein Ycf2-like5.6e-0728.16Show/hide
Query:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES
        M+AT  ++GM  F PF++ E +  K  E++L K K   +I  ++ N+  P+             +ENS          I E   S+E K+N + +++ + 
Subjt:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES

Query:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQT
        +N ++E +K+++R  SG      + G+  FE+ LE++EE+Q+E + +  +  ++N   +  + DDED+D +G T
Subjt:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQT

A0A5A7T3K3 Protein Ycf2-like1.8e-0527.18Show/hide
Query:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES
        M+AT  E+GM  F PF++ E +  K  E++L K K   +I  ++ N+  P+             +ENS          I E    +E KLN + +++ + 
Subjt:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES

Query:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQG----QTQPTSLLRHSAISSYKLK
        +N ++E +++++   SG      + G+  FE+ L+++E++Q+E + E  + +++N   +  + DDED+  +G    +T PT+  + S  S YK+K
Subjt:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQG----QTQPTSLLRHSAISSYKLK

A0A5D3CEX9 Protein Ycf2-like3.1e-0532.89Show/hide
Query:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTILENSYIRERGDSIESKLNRKLDQVIESINSLLEYLKTERRMMSGNASH
        M+AT +E+GM  F PF + E +  K  E++L K K   +I  ++ N+  P+  E + +R+  + IE    R    +  S+  LLE+LK+    M+     
Subjt:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTILENSYIRERGDSIESKLNRKLDQVIESINSLLEYLKTERRMMSGNASH

Query:  DIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQ
            G+  FE+ L+++EE+Q+E + E  + + +N R + GKRDD DED  G+
Subjt:  DIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQ

A0A5D3DHZ2 Protein Ycf2-like1.4e-0532.89Show/hide
Query:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTILENSYIRERGDSIESKLNRKLDQVIESINSLLEYLKTERRMMSGNASH
        M+AT +E+GM  F PF + E +  K  E++L K K   +I  ++ N+  P+  E + +R+  + IE    R    +  S+  LLE+LK+    M+     
Subjt:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTILENSYIRERGDSIESKLNRKLDQVIESINSLLEYLKTERRMMSGNASH

Query:  DIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQ
            G+  FE+ L+++EE+Q+E + E  + + +N R + GKRDD DED  G+
Subjt:  DIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQ

A0A5D3E3E8 Protein Ycf2-like1.8e-0527.18Show/hide
Query:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES
        M+AT  E+GM  F PF++ E +  K  E++L K K   +I  ++ N+  P+             +ENS          I E    +E KLN + +++ + 
Subjt:  MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTI------------LENSY---------IRERGDSIESKLNRKLDQVIES

Query:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQG----QTQPTSLLRHSAISSYKLK
        +N ++E +++++   SG      + G+  FE+ L+++E++Q+E + E  + +++N   +  + DDED+  +G    +T PT+  + S  S YK+K
Subjt:  INSLLEYLKTERRMMSGNASHDIYKGSTEFEKELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQG----QTQPTSLLRHSAISSYKLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCTACTGATGAGGAGATGGGGATGGCCAACTTTAAACCATTTGTTGATAAGGAGATAGAGTTTAGAAAGAGTTTGGAGGAACAACTATCGAAGCAGAAGCCAGG
AGCCAATATAGTAGATTTAACTTCAAACAAATCGGCACCAACCATACTCGAAAATTCCTACATAAGAGAAAGGGGTGACTCCATTGAGAGTAAACTGAACAGAAAATTGG
ATCAAGTTATAGAATCAATAAATTCTTTGCTGGAATATCTTAAAACAGAAAGGAGGATGATGAGTGGCAATGCAAGCCATGACATCTACAAGGGATCAACCGAATTTGAA
AAAGAACTAGAAGAATTGGAAGAAGAACAACAGGAGCTAGAACATGAGAAAAAGGATTCTGAGAATGCAAACGACCGAAAGATGAAAGGCAAGAGAGATGATGAAGATGA
GGACCCTCAAGGCCAAACACAACCGACGTCTTTGCTACGTCACTCTGCGATCTCCTCTTACAAACTAAAATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGCTACTGATGAGGAGATGGGGATGGCCAACTTTAAACCATTTGTTGATAAGGAGATAGAGTTTAGAAAGAGTTTGGAGGAACAACTATCGAAGCAGAAGCCAGG
AGCCAATATAGTAGATTTAACTTCAAACAAATCGGCACCAACCATACTCGAAAATTCCTACATAAGAGAAAGGGGTGACTCCATTGAGAGTAAACTGAACAGAAAATTGG
ATCAAGTTATAGAATCAATAAATTCTTTGCTGGAATATCTTAAAACAGAAAGGAGGATGATGAGTGGCAATGCAAGCCATGACATCTACAAGGGATCAACCGAATTTGAA
AAAGAACTAGAAGAATTGGAAGAAGAACAACAGGAGCTAGAACATGAGAAAAAGGATTCTGAGAATGCAAACGACCGAAAGATGAAAGGCAAGAGAGATGATGAAGATGA
GGACCCTCAAGGCCAAACACAACCGACGTCTTTGCTACGTCACTCTGCGATCTCCTCTTACAAACTAAAATGGTAG
Protein sequenceShow/hide protein sequence
MIATDEEMGMANFKPFVDKEIEFRKSLEEQLSKQKPGANIVDLTSNKSAPTILENSYIRERGDSIESKLNRKLDQVIESINSLLEYLKTERRMMSGNASHDIYKGSTEFE
KELEELEEEQQELEHEKKDSENANDRKMKGKRDDEDEDPQGQTQPTSLLRHSAISSYKLKW