CuGenDBv2

Gene ID	Lag0022203
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	general transcription and DNA repair factor IIH subunit TFB1-1-like
Genome location	chr7:20922888..20952832
RNA-Seq Expression	Lag0022203
Synteny	Lag0022203
Gene Ontology terms	GO:0006289 - nucleotide-excision repair (biological process) GO:0006351 - transcription, DNA-templated (biological process) GO:0000439 - transcription factor TFIIH core complex (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR005607 - BSD domain IPR027079 - TFIIH subunit Tfb1/GTF2H1 IPR035925 - BSD domain superfamily IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597731.1 General transcription and DNA repair factor IIH subunit TFB1-1, partial [Cucurbita argyrosperma subsp. sororia]

0.0e+00

87.15

Show/hide

Query:  ISFSLFSSTTEQKEQWWDLEEVQIGCSISFGSTVPGVDPCPKANGWKSWNFWKFWTALAFI-----GFWLFMVLLMPPDNWKMGTKYVQKSAKYKTSVKD
        +S  +F     Q +  W    V     ++      G  PCPKANG+  W     W  + F        ++ ++  +    WKMGTKYVQKSAKYKTSVKD
Subjt:  ISFSLFSSTTEQKEQWWDLEEVQIGCSISFGSTVPGVDPCPKANGWKSWNFWKFWTALAFI-----GFWLFMVLLMPPDNWKMGTKYVQKSAKYKTSVKD

Query:  PGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEPAQTPSEKPVSTFP
        PGTPGVLEMTERKFVFRPSDPTSASKLDVEFR IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGE  Q PSEK V+TFP
Subjt:  PGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEPAQTPSEKPVSTFP

Query:  HEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAV
        HEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAV
Subjt:  HEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAV

Query:  HQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDHGIFRDGGKEISES
        HQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAAETRKKIRRVDPTLDLEADLGDDYTHLPDHGIFRDGGKEI+ES
Subjt:  HQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDHGIFRDGGKEISES

Query:  QNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQQANAIKTLD
         NE  RRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQ  LDRI+RMTAIEDLQA +++PFAPLCIKDPRDYFDAQQANAIKTLD
Subjt:  QNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQQANAIKTLD

Query:  DTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSY
        DTRAGMQQTKC+LST EAYCSLRESISEIKSSGLNHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSY
Subjt:  DTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSY

Query:  PITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
        PITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
Subjt:  PITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT

XP_008457278.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis melo]

0.0e+00

95.13

Show/hide

Query:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYV KSAKYKTSVKDPGTPGVLEMTE KFVFRPSDPTSASKLDVEFR IKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT
        K GE AQ PSE+PV+ FPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD SKKSKQL+GFKSSMVLDTKPMSDGRTNKVT
Subjt:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT

Query:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT
        FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKKIR VDPTLDLEADLGDDYT
Subjt:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT

Query:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK
        HLPDHGIFRDGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIK
Subjt:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK

Query:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
        DPRDYFDAQQANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
Subjt:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL

Query:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
        LHHWISIQELL+HFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGER NGYT
Subjt:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT

XP_022932684.1 probable RNA polymerase II transcription factor B subunit 1-1 [Cucurbita moschata]

0.0e+00

96.13

Show/hide

Query:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFR IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT
        KSGE  Q PSEK V+TFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQLVGFKSSMVLDTKPMSDGRTNKVT
Subjt:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT

Query:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT
        FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAAETRKKIRRVDPTLDLEADLGDDYT
Subjt:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT

Query:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK
        HLPDHGIFRDGGKEI+ES NE  RRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQ  LDRI+RMTAIEDLQA +++PFAPLCIK
Subjt:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK

Query:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
        DPRDYFDAQQANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSGLNHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
Subjt:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL

Query:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
        LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
Subjt:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT

XP_023539702.1 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucurbita pepo subsp. pepo]

0.0e+00

95.63

Show/hide

Query:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDV+FR IKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT
        KSGE  Q PSEK V+TFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQLVGFKSSMVLDTKPMSDGRTNKVT
Subjt:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT

Query:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT
        FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAAETRKKIRRVDPTLDLEADLGDDYT
Subjt:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT

Query:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK
        HLPDHGIFRDGGKEI+ES NE  RRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHA EGNEKQ  LDRI+RMTAIEDLQA +++PFAPLCIK
Subjt:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK

Query:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
        DPRDYFDAQQANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSGLNHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
Subjt:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL

Query:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
        LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
Subjt:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT

XP_038894178.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1 [Benincasa hispida]

0.0e+00

95.13

Show/hide

Query:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYV KSAKYKTS+KDPGTPGVLEMTE KF+FRPSDPTSASKLDVEFR IKGHKNTKEGSNKPPWLNLTRDQGGS IFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT
        KSGE AQ P E+PV+ FPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD+SKKSKQL+GFKSSMVLDTKPMSDGRTNKVT
Subjt:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT

Query:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT
        FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAAE RKKIR VDPTLDLEADLGDDYT
Subjt:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT

Query:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK
        HLPDHGIFRDGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALV+SRHAVEGNEKQT LDRISRMTAIEDLQ  ++HPFAPLCIK
Subjt:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK

Query:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
        DPRDYFDAQQANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSGLNHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
Subjt:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL

Query:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
        LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGERPNGYT
Subjt:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C6E8 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1

0.0e+00

95.13

Show/hide

Query:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYV KSAKYKTSVKDPGTPGVLEMTE KFVFRPSDPTSASKLDVEFR IKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT
        K GE AQ PSE+PV+ FPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD SKKSKQL+GFKSSMVLDTKPMSDGRTNKVT
Subjt:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT

Query:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT
        FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKKIR VDPTLDLEADLGDDYT
Subjt:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT

Query:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK
        HLPDHGIFRDGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIK
Subjt:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK

Query:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
        DPRDYFDAQQANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
Subjt:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL

Query:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
        LHHWISIQELL+HFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGER NGYT
Subjt:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT

A0A6J1DNY2 probable RNA polymerase II transcription factor B subunit 1-1 isoform X2

0.0e+00

93.28

Show/hide

Query:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVF+PSDPTSASKLDVEFR IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT
        KSGE AQ  SE+ V+TFPHEQLSK EMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD+SKKSKQLVGFK+SMVLDTKPMSDGRTNKVT
Subjt:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT

Query:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT
        FNLTPEIKY+IFALKPAVHQAFL+HVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAAETRKKIR VDPTLDLEADLGDDYT
Subjt:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT

Query:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK
        HLPDHGIFRDGGKEI+ES NE YRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRH VEGNEKQT LDRISRMTAIEDLQA ++HPFAPLCIK
Subjt:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK

Query:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
        DPRDYFDAQQANAIKTLDDTRAGMQQTKC+LSTAEAYCSLRE ISEIKSSGLNHPIIKPEVA+MVYNGLTQNISSTKYQLGK+PQESILESLPNP K+EL
Subjt:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL

Query:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
        LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFR          HQALDAAFQHHDADLQKRSAKSGERPNGYT
Subjt:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT

A0A6J1DRT9 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1

0.0e+00

94.96

Show/hide

Query:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVF+PSDPTSASKLDVEFR IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT
        KSGE AQ  SE+ V+TFPHEQLSK EMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD+SKKSKQLVGFK+SMVLDTKPMSDGRTNKVT
Subjt:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT

Query:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT
        FNLTPEIKY+IFALKPAVHQAFL+HVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAAETRKKIR VDPTLDLEADLGDDYT
Subjt:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT

Query:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK
        HLPDHGIFRDGGKEI+ES NE YRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRH VEGNEKQT LDRISRMTAIEDLQA ++HPFAPLCIK
Subjt:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK

Query:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
        DPRDYFDAQQANAIKTLDDTRAGMQQTKC+LSTAEAYCSLRE ISEIKSSGLNHPIIKPEVA+MVYNGLTQNISSTKYQLGK+PQESILESLPNP K+EL
Subjt:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL

Query:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
        LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
Subjt:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT

A0A6J1EXP7 probable RNA polymerase II transcription factor B subunit 1-1

0.0e+00

96.13

Show/hide

Query:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFR IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT
        KSGE  Q PSEK V+TFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQLVGFKSSMVLDTKPMSDGRTNKVT
Subjt:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT

Query:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT
        FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAAETRKKIRRVDPTLDLEADLGDDYT
Subjt:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT

Query:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK
        HLPDHGIFRDGGKEI+ES NE  RRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQ  LDRI+RMTAIEDLQA +++PFAPLCIK
Subjt:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK

Query:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
        DPRDYFDAQQANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSGLNHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
Subjt:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL

Query:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
        LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
Subjt:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT

A0A6J1IB04 probable RNA polymerase II transcription factor B subunit 1-1

0.0e+00

95.8

Show/hide

Query:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFR IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT
        KSGE  Q PSEK V+TFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQLVGFKSSMVLDTKPMSDGRTNKVT
Subjt:  KSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVT

Query:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT
        FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAAETRKKIRRVDPTLDLEADLGDDY 
Subjt:  FNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYT

Query:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK
        HLPDHGIFRDGGKEI+ES NE  RRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEG+EKQ  LDRI+RMTAIEDLQA +++PFAPLCIK
Subjt:  HLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK

Query:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
        DPRDYFDAQQANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSGLNHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL
Subjt:  DPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEEL

Query:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
        LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
Subjt:  LHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT

SwissProt top hits

e value

%identity

Alignment

P32780 General transcription factor IIH subunit 1

2.0e-27

Show/hide

Query:  SKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKS--KQLVGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQ
        +  E+E + R LQED  L +L+K  V+  V++  EFWA R  +   D S  S  KQ VG  ++ + D +P +DG  N + +NLT +I   IF   PAV  
Subjt:  SKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKS--KQLVGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQ

Query:  AFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAA---AEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDHGIFRDGGKEISE
         +  +VP+ M+EK+FWT++F++ Y H  + +  +    AE A+ +E  L          +T   +   +P LDL A   +D      +GI        S+
Subjt:  AFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAA---AEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDHGIFRDGGKEISE

Query:  SQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAI--EDLQASNNHPFAPLCIKDPRDYFDAQ---QAN
        S  E+    + +  N   A+VL       + ++ +T +E      ++ + +  Q  + R     +I  EDL  +N+     L +K    Y+      Q+ 
Subjt:  SQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAI--EDLQASNNHPFAPLCIKDPRDYFDAQ---QAN

Query:  AIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLR
           T  D     Q  +  +   EAY      +    ++      + P  A+M   G T              Q++I + +PN  + EL H ++++ ELLR
Subjt:  AIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLR

Query:  HFWSSYPITTSYLYTKVSRLKDAMSK
        HFWS +P+ T +L  KV ++K  + +
Subjt:  HFWSSYPITTSYLYTKVSRLKDAMSK

Q3ECP0 General transcription and DNA repair factor IIH subunit TFB1-1

2.1e-199

61.18

Show/hide

Query:  VQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEP
        ++K  KYK++VKDPGTPG L + E   +F P+DP S SKL V  + IK  K TKEGSNKPPWLNLT  Q  S+IFEF+N+ D+H CR+F+  ALAK    
Subjt:  VQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEP

Query:  AQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTP
         +    K V +   EQLS  E+ELR + L+E+SELQ+LHKQFV   VLTE EFWA RKKLL +D  +KSKQ +G KS MV   KP +DGRTN+VTFNLTP
Subjt:  AQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTP

Query:  EIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDH
        EI +QIFA KPAV QAF+N+VP+KM+EKDFWTKYFRAEYL+STKN+  AAAEAAEDEELA+FLK D+ILA ETR KIRRVDPTLD+EAD GDDYTHL DH
Subjt:  EIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDH

Query:  GIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEG------NEKQTTLDRISRMTAIEDLQASNNHPFAPLCI
        GI RDG  ++ E QN+ ++R+L QDLNR  AVVLEGR+IDV+ ED R VAEAL R +   +       +  Q  L+R+SR+  +EDLQA  N P APL I
Subjt:  GIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEG------NEKQTTLDRISRMTAIEDLQASNNHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEE
        KDPRDYF++QQ N +    +   G +  K N+   EAY  L+ESI EI+++GL+ P+IKPEV+  V++ LT+ I++ K   GKNP+ES L+ LP  TK+E
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEE

Query:  LLHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGY
        +LHHW SIQELL+HFWSSYPITT+YL+TKV +LKDAMS  Y +LE +KE+VQ+D RHQVSLLVRPM QALDAAF H++ DLQ+R+AKSGERPNGY
Subjt:  LLHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGY

Q55FP1 General transcription factor IIH subunit 1

9.1e-25

22.87

Show/hide

Query:  SGEPAQTPSE---KPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFV-IGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTN
        S +PAQ   +   K +S      LS+ +++ R+  LQ + EL++L++Q V    V++ES+FW +RK +L+ D ++  KQ  G  S+++ D +P S+   N
Subjt:  SGEPAQTPSE---KPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFV-IGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTN

Query:  KVTFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGD
         V +  TP + +QIF   P+V +A+  +VP K+SE++FW KY +++Y +  ++S  A A   +D+  + +  D+       ++K+  ++P +DL +  G 
Subjt:  KVTFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGD

Query:  DYTHLPDHGIFRDGGKEISESQ---------NEHYRRTL-SQDLNRQGAVVLE--------------------------GRTIDVDLEDPRTVAEALVRS
        D      +G+  D  ++ ++ +         N H    L S+DL    ++ +E                            T   +     T     ++ 
Subjt:  DYTHLPDHGIFRDGGKEISESQ---------NEHYRRTL-SQDLNRQGAVVLE--------------------------GRTIDVDLEDPRTVAEALVRS

Query:  RHAVEGNEKQT----TLDRI--------SRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQQANAI-------KTLDDTRAGMQQTKCNLSTAEAYCSLRE
         +   G++++      +++I        ++   I+DLQ  N+     L I D + YF+    N I       + +D      +  + NL           
Subjt:  RHAVEGNEKQT----TLDRI--------SRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQQANAI-------KTLDDTRAGMQQTKCNLSTAEAYCSLRE

Query:  SISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSY------PITTSYLYTKVSRLKDAM
        SI +  +  ++  I +P      YN    N S  +Y L   P+ S         K +L   +    ELLRHFW++          TS    K +++  A+
Subjt:  SISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSY------PITTSYLYTKVSRLKDAM

Query:  SKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKS
        +  Y ++EE K+ + +  +   S L  P+ ++L  A +  ++   + + K+
Subjt:  SKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKS

Q9DBA9 General transcription factor IIH subunit 1

8.2e-26

26.3

Show/hide

Query:  SKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKS-KQLVGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQA
        +  E+E + R LQED  L +L+K  V+  V++  EFWA R  +   D S  S KQ VG  ++ + D +P +DG  N + +NLT +I   IF   PAV   
Subjt:  SKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKS-KQLVGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQA

Query:  FLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAA---AEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEA------DLGDDYTHLP----DHGIF
        +   VP+ M+EK+FWT++F++ Y H  + +  +    AE A+ +E  L          +T   +   +P LDL +      D G   + +P       I 
Subjt:  FLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAA---AEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEA------DLGDDYTHLP----DHGIF

Query:  RDGGKEISESQNEHYRRTLSQDLNRQGA--------VVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK
         +    I +  N H    L+  L +Q A          ++G + D D   P            AV+  + Q +++        EDL  +N+     L +K
Subjt:  RDGGKEISESQNEHYRRTLSQDLNRQGA--------VVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIK

Query:  DPRDYFDAQ---QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTK
            Y+      Q+    T  D     Q  +  +   EAY      +    ++      + P  A+M   G T              Q+++ + +PN  +
Subjt:  DPRDYFDAQ---QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTK

Query:  EELLHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSK
         EL H ++++ ELLRHFWS +P+ T +L  KV ++K  + +
Subjt:  EELLHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSK

Q9M322 General transcription and DNA repair factor IIH subunit TFB1-3

4.8e-191

60.99

Show/hide

Query:  VQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEP
        ++K  KYK+ VKDPGT G LE++E   +F P+DP S  KL V+   IK  K TKEGSNKPPWLNLT  QG S+IFEF+N+ D+H CR+F+  ALAK  E 
Subjt:  VQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEP

Query:  AQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTP
           P++  V T P EQLS +E ELR + L+E+SELQKLHKQFV   VLTE EFW+ RKKLL +D  +KSKQ +G KS MV   KP +DGRTN+VTFNLT 
Subjt:  AQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTP

Query:  EIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDH
        EI +QIFA KPAV QAF+N+VP KM+EKDFWTKYFRAEYL+STKN+  AAAEAAEDEELA+FLK D+ILA E R+K+RRVDPTLD++AD GDDYTHL DH
Subjt:  EIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDH

Query:  GIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHA------VEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCI
        GI RDG  +I E QN+  +R+L QDLNR  AVVLEGR I+V  ED R VAEAL R++        +  +  Q  L+R+SR T +EDLQA  N P APL I
Subjt:  GIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHA------VEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEE
        KDPRDYF++QQ N    L + R G + +K N+   EAY  L+ESI  I+ +GL+ P+IKPEV+  V++ LT+ IS+ K  LGKNPQES L+ LP  TK+E
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEE

Query:  LLHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAK
        ++HHW SIQEL+RHFWSSYPITT+YL TKV +LKDAMS  Y  L+ +K++VQ+D RHQVSLLVRPM QALDAAFQH+++DLQ+R+AK
Subjt:  LLHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAK

Arabidopsis top hits

e value

%identity

Alignment

AT1G55750.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)

1.5e-200

61.18

Show/hide

Query:  VQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEP
        ++K  KYK++VKDPGTPG L + E   +F P+DP S SKL V  + IK  K TKEGSNKPPWLNLT  Q  S+IFEF+N+ D+H CR+F+  ALAK    
Subjt:  VQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEP

Query:  AQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTP
         +    K V +   EQLS  E+ELR + L+E+SELQ+LHKQFV   VLTE EFWA RKKLL +D  +KSKQ +G KS MV   KP +DGRTN+VTFNLTP
Subjt:  AQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTP

Query:  EIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDH
        EI +QIFA KPAV QAF+N+VP+KM+EKDFWTKYFRAEYL+STKN+  AAAEAAEDEELA+FLK D+ILA ETR KIRRVDPTLD+EAD GDDYTHL DH
Subjt:  EIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDH

Query:  GIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEG------NEKQTTLDRISRMTAIEDLQASNNHPFAPLCI
        GI RDG  ++ E QN+ ++R+L QDLNR  AVVLEGR+IDV+ ED R VAEAL R +   +       +  Q  L+R+SR+  +EDLQA  N P APL I
Subjt:  GIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEG------NEKQTTLDRISRMTAIEDLQASNNHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEE
        KDPRDYF++QQ N +    +   G +  K N+   EAY  L+ESI EI+++GL+ P+IKPEV+  V++ LT+ I++ K   GKNP+ES L+ LP  TK+E
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEE

Query:  LLHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGY
        +LHHW SIQELL+HFWSSYPITT+YL+TKV +LKDAMS  Y +LE +KE+VQ+D RHQVSLLVRPM QALDAAF H++ DLQ+R+AKSGERPNGY
Subjt:  LLHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGY

AT3G61420.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)

3.4e-192

60.99

Show/hide

Query:  VQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEP
        ++K  KYK+ VKDPGT G LE++E   +F P+DP S  KL V+   IK  K TKEGSNKPPWLNLT  QG S+IFEF+N+ D+H CR+F+  ALAK  E 
Subjt:  VQKSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEP

Query:  AQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTP
           P++  V T P EQLS +E ELR + L+E+SELQKLHKQFV   VLTE EFW+ RKKLL +D  +KSKQ +G KS MV   KP +DGRTN+VTFNLT 
Subjt:  AQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTP

Query:  EIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDH
        EI +QIFA KPAV QAF+N+VP KM+EKDFWTKYFRAEYL+STKN+  AAAEAAEDEELA+FLK D+ILA E R+K+RRVDPTLD++AD GDDYTHL DH
Subjt:  EIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDH

Query:  GIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHA------VEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCI
        GI RDG  +I E QN+  +R+L QDLNR  AVVLEGR I+V  ED R VAEAL R++        +  +  Q  L+R+SR T +EDLQA  N P APL I
Subjt:  GIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHA------VEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEE
        KDPRDYF++QQ N    L + R G + +K N+   EAY  L+ESI  I+ +GL+ P+IKPEV+  V++ LT+ IS+ K  LGKNPQES L+ LP  TK+E
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEE

Query:  LLHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAK
        ++HHW SIQEL+RHFWSSYPITT+YL TKV +LKDAMS  Y  L+ +K++VQ+D RHQVSLLVRPM QALDAAFQH+++DLQ+R+AK
Subjt:  LLHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTAACTCCTCCTTTACGTTCATCAATCCTTTATGTGCAGAAGTTGTTGCTGTTTTGGAGGGACTTCAATTGGCTCATAGAATGAATATGAGGCAAATTAAGACATT
ATTTGATTCACTTACTCTTGTCTCAATTTTGCATAAGGAGGTGGAATGTGATGCTCACATTGCTCCAGTCATTTGGGATATAGAGCAAACTAGGAATATGTCTGAGAGTG
TTAAGATTTTTCATGTGAGTAGTCAATATAATGTGATGACTCATAAATTGGCTCGTTCAAAAGAACCAGGTCTGCAACCTGCGAACCATTACTGGACCTTCCGATTCCAT
CATACTCTAAAACCCATTAGCTTTTCTCTGTTTTCTTCAACAACGGAACAGAAGGAACAGTGGTGGGACTTGGAAGAAGTTCAAATTGGTTGCTCGATTTCGTTCGGGAG
TACGGTTCCGGGAGTTGATCCTTGTCCGAAGGCTAATGGCTGGAAATCTTGGAATTTCTGGAAATTTTGGACTGCCCTTGCTTTTATTGGGTTCTGGCTGTTTATGGTGC
TTTTAATGCCACCAGATAATTGGAAGATGGGAACCAAGTATGTCCAGAAGAGTGCTAAGTACAAGACTTCAGTTAAGGATCCTGGCACGCCTGGCGTTTTGGAAATGACA
GAGCGCAAGTTTGTATTTAGACCCAGTGATCCCACTTCAGCTTCTAAGCTTGACGTGGAGTTCAGATTGATTAAAGGCCATAAAAACACCAAGGAAGGATCAAATAAACC
ACCATGGCTTAATCTCACCAGGGACCAGGGTGGAAGTTACATTTTTGAGTTTAAAAACTTCTCCGATCTTCATGTTTGCAGGGAGTTTGTGGGAAGTGCTCTAGCAAAGT
CGGGAGAGCCTGCACAAACTCCCTCTGAGAAGCCTGTATCCACATTTCCGCATGAACAACTCAGTAAATCAGAAATGGAACTCCGAATGAGATGTTTGCAAGAGGATAGT
GAACTGCAGAAACTTCATAAACAATTTGTGATTGGTGGTGTGTTGACCGAATCTGAGTTCTGGGCAGCAAGGAAGAAATTACTGGAACGAGACGACTCCAAAAAGTCAAA
ACAGTTGGTTGGTTTCAAGAGTTCAATGGTTCTGGACACCAAACCAATGTCTGATGGTCGGACAAACAAGGTTACATTTAATTTGACACCAGAGATCAAATATCAGATTT
TTGCTTTGAAACCAGCTGTTCACCAGGCATTCCTTAATCATGTTCCCAATAAGATGTCGGAGAAAGACTTTTGGACAAAATATTTTAGAGCTGAGTACCTTCATAGTACA
AAAAATTCTATTGCAGCTGCAGCTGAGGCTGCTGAAGATGAGGAACTTGCCCTTTTTCTGAAGGACGATGATATATTGGCTGCTGAAACTAGGAAAAAGATTCGGCGTGT
TGATCCTACATTGGATTTGGAAGCTGATCTAGGAGATGATTACACACACCTTCCAGATCATGGAATCTTTCGTGATGGTGGGAAGGAAATTTCTGAATCACAGAATGAAC
ATTATAGAAGGACTCTGTCCCAAGACCTTAATCGCCAAGGTGCAGTTGTTCTTGAAGGAAGAACAATAGACGTGGACTTGGAAGATCCAAGGACTGTTGCAGAAGCACTT
GTGCGGTCTAGACATGCGGTAGAAGGAAATGAGAAGCAGACAACACTTGATAGGATCTCTAGGATGACAGCGATAGAGGATCTTCAAGCATCTAATAACCATCCTTTTGC
TCCTCTTTGTATTAAGGATCCTCGAGATTATTTTGATGCTCAACAAGCAAATGCCATTAAAACATTGGATGATACAAGAGCTGGAATGCAACAAACTAAATGCAATTTGA
GCACTGCAGAAGCATATTGCTCACTGAGGGAATCCATATCTGAGATCAAATCTTCTGGATTGAATCATCCCATAATTAAACCTGAAGTTGCGGTTATGGTTTATAATGGA
TTGACTCAAAATATTTCTAGTACCAAATATCAACTAGGGAAAAACCCTCAGGAGAGTATTCTGGAGAGTTTACCAAACCCTACAAAGGAGGAACTTCTACATCATTGGAT
CTCGATTCAAGAATTACTGAGGCACTTTTGGTCGTCTTATCCAATTACCACATCATATCTATATACCAAAGTGAGCAGATTGAAGGATGCCATGTCAAAAATCTATCGAC
AGTTAGAGGAGATTAAGGAAACTGTGCAGGCAGATTTCCGCCACCAGGTATCTCTTCTGGTTCGTCCAATGCATCAGGCTCTGGATGCTGCATTTCAGCATCATGACGCT
GACTTACAGAAGAGATCAGCAAAGAGCGGAGAAAGGCCTAACGGATACACCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVNSSFTFINPLCAEVVAVLEGLQLAHRMNMRQIKTLFDSLTLVSILHKEVECDAHIAPVIWDIEQTRNMSESVKIFHVSSQYNVMTHKLARSKEPGLQPANHYWTFRFH
HTLKPISFSLFSSTTEQKEQWWDLEEVQIGCSISFGSTVPGVDPCPKANGWKSWNFWKFWTALAFIGFWLFMVLLMPPDNWKMGTKYVQKSAKYKTSVKDPGTPGVLEMT
ERKFVFRPSDPTSASKLDVEFRLIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEPAQTPSEKPVSTFPHEQLSKSEMELRMRCLQEDS
ELQKLHKQFVIGGVLTESEFWAARKKLLERDDSKKSKQLVGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHST
KNSIAAAAEAAEDEELALFLKDDDILAAETRKKIRRVDPTLDLEADLGDDYTHLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEAL
VRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNG
LTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDA
DLQKRSAKSGERPNGYT

Lag0022203 (gene) of Sponge gourd (AG-4) v1 genome