CuGenDBv2

Gene ID	Lag0022210
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr7:21182171..21182830
RNA-Seq Expression	Lag0022210
Synteny	Lag0022210
Gene Ontology terms	NA
InterPro domains	IPR036691 - Endonuclease/exonuclease/phosphatase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

RYR04437.1 hypothetical protein Ahy_B06g084164 [Arachis hypogaea]

7.3e-30

33.8

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Query:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE
        +GF GH FTW N +P   TI ERLDR  +T+ W+  +P  +V HL   RSDH P+ + +    +   R    I RF+E WL++   ++V+ ++W     E
Subjt:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE

Query:  HDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQAS
        H       L    + C   +  WG+   G   ++I+     ++      +  S+   L +   EL+D+L +EE+ W QRSR  WL+ GD NT++FH++A 
Subjt:  HDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQAS

Query:  YRHRVNRIIGLTDGEG
         R++ NRI  +TD  G
Subjt:  YRHRVNRIIGLTDGEG

RYR06732.1 hypothetical protein Ahy_B05g074030 [Arachis hypogaea]

1.6e-29

33.33

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Query:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE
        +GFVGH FTW N +P    I ERLDR  +T+ W+  +P  +V HL   RSDH P+ + +    +   R    I RF+E WL++   ++V+ ++W      
Subjt:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE

Query:  HDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQAS
            +   L    + C   +  WG+   G   ++I+     ++      +  S+   L +   EL+D+L +EE+ W QRSR  WL+ GD NT++FH++AS
Subjt:  HDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQAS

Query:  YRHRVNRIIGLTD
         R++ NRI  +TD
Subjt:  YRHRVNRIIGLTD

XP_012836341.1 PREDICTED: uncharacterized protein LOC105956976 [Erythranthe guttata]

1.2e-29

32.27

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Query:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE
        +GF G +FTW N +    T+ ERLDR  +   W   YP   V HL+Y  SDHSP++++L PP   +    +R  RF+  WLR    + +VH     ++ +
Subjt:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE

Query:  HDLAAPI-LLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQA
          +A P+  +   ++ C  ++  W ++ V    +RI    +++   +  L+   ++  ++Q   E+E   +E ++YW+QRS+  W+QEGD NT++FH +A
Subjt:  HDLAAPI-LLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQA

Query:  SYRHRVNRIIGLTDGEGEWQ
        + R+R+NR+  L D  G W+
Subjt:  SYRHRVNRIIGLTDGEGEWQ

XP_023906329.1 uncharacterized protein LOC112018051 [Quercus suber]

2.3e-31

35.16

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Query:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE
        MGF G+   W N R     + ERLDR  +T+ W+ L+P   V+HL  + SDH P+ + + PP     R   +I RF+E W+ HAN ++++ EAW   +  
Subjt:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE

Query:  HDLAAPI-LLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQA
        H   +P+  + + SK+C   +  W R   GN   R+    Q   T++ E     + + +     E+ ++L  EE++W+QRSR +WL  GD NT++FH++A
Subjt:  HDLAAPI-LLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQA

Query:  SYRHRVNRIIGLTDGEGEW
        + + R N I+GL D E EW
Subjt:  SYRHRVNRIIGLTDGEGEW

XP_038718167.1 uncharacterized protein LOC120011171 [Tripterygium wilfordii]

1.2e-32

37.16

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Query:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE
        +G+VG ++TWCN R  G  I+ERLDR      W++L+P+ +VNH     SDH P+ V  +P   G  R ++R  RF+E W RH   + VV + W  + G 
Subjt:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE

Query:  HDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQAS
         D    I+           +  W RS  G+ ++R+++ ++++     +      RE ++   SE+ ++L  EEL W+QRSR  WLQ+GD NT++FHR+AS
Subjt:  HDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQAS

Query:  YRHRVNRIIGLTDGEGEW
         RH+ NRI G+ D  G+W
Subjt:  YRHRVNRIIGLTDGEGEW

TrEMBL top hits

e value

%identity

Alignment

A0A2N9GII4 Uncharacterized protein

2.9e-32

34.25

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Query:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE
        +G+ G++FTW N R     + ERLDR  +T++W NL+    V HL  ++SDH P+ ++         R  +R+ RF+E W  H + + V+   W  + GE
Subjt:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE

Query:  HDLAAPIL-LADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQA
            +P+  L +  KRC   +A W +   G    +IR   + ++   N+     +R L+S    E+  +L  +E++WKQRSR  WL+EGD NT++FH  A
Subjt:  HDLAAPIL-LADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQA

Query:  SYRHRVNRIIGLTDGEGEW
        + R R N+I GL + +G+W
Subjt:  SYRHRVNRIIGLTDGEGEW

A0A2N9HE04 Reverse transcriptase domain-containing protein

2.9e-32

34.25

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Query:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE
        +G+ G++FTW N R     + ERLDR  +T++W NL+    V HL  ++SDH P+ ++         R  +R+ RF+E W  H + + V+   W  + GE
Subjt:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE

Query:  HDLAAPIL-LADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQA
            +P+  L +  KRC   +A W +   G    +IR   + ++   N+     +R L+S    E+  +L  +E++WKQRSR  WL+EGD NT++FH  A
Subjt:  HDLAAPIL-LADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQA

Query:  SYRHRVNRIIGLTDGEGEW
        + R R N+I GL + +G+W
Subjt:  SYRHRVNRIIGLTDGEGEW

A0A2N9I921 Reverse transcriptase domain-containing protein

4.9e-32

32.42

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Query:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE
        +G++G  FTWCN R  G T++ERLDR  ++ AW + +P   V HLDY  SDH P   + + P     R   +  RF+E W+  +   + +  AW      
Subjt:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE

Query:  HDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQAS
        + +   I   +    C + +  W +S  G+  ++++   ++++    +     S +L+    +E+  +L +EE  W+QRSR  WL++GD NT +FH +A+
Subjt:  HDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQAS

Query:  YRHRVNRIIGLTDGEGEWQ
        +R R N I+GL D +GEWQ
Subjt:  YRHRVNRIIGLTDGEGEWQ

A0A2N9IJF6 Uncharacterized protein

2.9e-32

34.25

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Query:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE
        +G+ G++FTW N R     + ERLDR  +T++W NL+    V HL  ++SDH P+ ++         R  +R+ RF+E W  H + + V+   W  + GE
Subjt:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE

Query:  HDLAAPIL-LADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQA
            +P+  L +  KRC   +A W +   G    +IR   + ++   N+     +R L+S    E+  +L  +E++WKQRSR  WL+EGD NT++FH  A
Subjt:  HDLAAPIL-LADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQA

Query:  SYRHRVNRIIGLTDGEGEW
        + R R N+I GL + +G+W
Subjt:  SYRHRVNRIIGLTDGEGEW

A0A444YR87 Reverse transcriptase domain-containing protein

3.5e-30

33.8

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Query:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE
        +GF GH FTW N +P   TI ERLDR  +T+ W+  +P  +V HL   RSDH P+ + +    +   R    I RF+E WL++   ++V+ ++W     E
Subjt:  MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGE

Query:  HDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQAS
        H       L    + C   +  WG+   G   ++I+     ++      +  S+   L +   EL+D+L +EE+ W QRSR  WL+ GD NT++FH++A 
Subjt:  HDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQAS

Query:  YRHRVNRIIGLTDGEG
         R++ NRI  +TD  G
Subjt:  YRHRVNRIIGLTDGEG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G43760.1 DNAse I-like superfamily protein

2.4e-07

25.37

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Query:  GHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRH---------ANPQQVVHEAWV
        G  +TW N +     I  +LDR  +   W + +P+ +        SDHSP  +IL   P    + S++  R+      H         A  +Q+   + +
Subjt:  GHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRH---------ANPQQVVHEAWV

Query:  LKHGEHDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELL---SQADSELEDILQEEELYWKQRSREVWLQEGDWNT
           GEH  AA        K+C   +    R   GN   + + A   +++  ++L  + S  L      A  +        E +++Q+SR  WLQ+GD NT
Subjt:  LKHGEHDLAAPILLADISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELL---SQADSELEDILQEEELYWKQRSREVWLQEGDWNT

Query:  RWFHR
        R+FH+
Subjt:  RWFHR

Sequences

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CDS sequence

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ATGGGTTTCGTTGGGCATCGTTTTACCTGGTGCAATAGAAGGCCAAGAGGGGAAACGATATATGAGAGGTTGGACAGATGTTTTAGTACTGTGGCCTGGCAGAATCTATA
CCCGAATTATGTTGTCAACCACCTTGATTACAACCGATCTGATCATAGTCCTGTAGAGGTTATTCTTGTTCCTCCTCCTGATGGTTGGTTACGGGCTAGTCAGCGAATTG
TCCGGTTTGATGAGACTTGGTTGCGACATGCAAACCCGCAACAGGTGGTTCATGAGGCTTGGGTCCTAAAGCATGGGGAGCATGACTTGGCAGCCCCTATTCTTCTTGCT
GATATATCTAAGAGATGCATGAGCTCGATGGCCGGTTGGGGGCGTTCAAAGGTTGGAAATTTTTCCCAGCGTATCCGTGTTGCTAATCAGAAGGTGCAAACGACCATTAA
CGAATTGAGAGATTCTAGTTCTCGAGAGCTATTGTCTCAGGCTGATTCTGAGTTGGAGGATATTTTGCAGGAGGAAGAGTTGTACTGGAAACAGAGATCGAGGGAGGTTT
GGCTCCAAGAGGGAGATTGGAACACGAGGTGGTTCCACCGTCAAGCATCTTATCGGCATAGAGTTAATCGAATTATTGGTCTCACTGATGGGGAAGGTGAATGGCAATAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGFVGHRFTWCNRRPRGETIYERLDRCFSTVAWQNLYPNYVVNHLDYNRSDHSPVEVILVPPPDGWLRASQRIVRFDETWLRHANPQQVVHEAWVLKHGEHDLAAPILLA
DISKRCMSSMAGWGRSKVGNFSQRIRVANQKVQTTINELRDSSSRELLSQADSELEDILQEEELYWKQRSREVWLQEGDWNTRWFHRQASYRHRVNRIIGLTDGEGEWQ

Lag0022210 (gene) of Sponge gourd (AG-4) v1 genome