; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022218 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022218
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr7:21356400..21364986
RNA-Seq ExpressionLag0022218
SyntenyLag0022218
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045325.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-1485.71Show/hide
Query:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
        RDYMLVYGAKDLIL GYTDSDFQ+DKDSRK TS+SVFTLN G +VWRSI
Subjt:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
KAA0047457.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-1486Show/hide
Query:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSIN
        RDYMLVYGAKDLILIGYTDSDFQ+DKDS+K T  SVFTLNEG +VWRSIN
Subjt:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSIN
KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa]2.6e-1487.76Show/hide
Query:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
        RDYMLVYGAKDLIL GYTDSDFQ+DKDSRK TS SVFTLNEG +VWRSI
Subjt:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
KAA0062147.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-1385.71Show/hide
Query:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
        RDYMLVY AKDLILIGYTDSDFQ+DKDSRK TS+SVFTLN G +VWRSI
Subjt:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
TYK11956.1 gag/pol protein [Cucumis melo var. makuwa]9.8e-1483.67Show/hide
Query:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
        RDYMLVYG+KDLIL GYTDSDFQ+DK+SRKFTS SVFTLN G +VWRSI
Subjt:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
TrEMBL top hitse value%identityAlignment
A0A5A7TVB5 Gag/pol protein2.8e-1485.71Show/hide
Query:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
        RDYMLVYGAKDLIL GYTDSDFQ+DKDSRK TS+SVFTLN G +VWRSI
Subjt:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
A0A5A7TZS4 Gag/pol protein7.3e-1586Show/hide
Query:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSIN
        RDYMLVYGAKDLILIGYTDSDFQ+DKDS+K T  SVFTLNEG +VWRSIN
Subjt:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSIN
A0A5A7UWW4 Gag/pol protein6.2e-1485.71Show/hide
Query:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
        RDYMLVYGAKDLIL GYTDSDFQ+DKDSRK TS SVFTLN G +VWRSI
Subjt:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
A0A5A7V1F5 Gag/pol protein1.3e-1487.76Show/hide
Query:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
        RDYMLVYGAKDLIL GYTDSDFQ+DKDSRK TS SVFTLNEG +VWRSI
Subjt:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
A0A5D3CNE5 Gag/pol protein4.8e-1483.67Show/hide
Query:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
        RDYMLVYG+KDLIL GYTDSDFQ+DK+SRKFTS SVFTLN G +VWRSI
Subjt:  RDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGACTACATGTTGGTGTATGGGGCTAAGGATTTGATCCTTATAGGATACACCGACTCTGACTTCCAGTCTGACAAGGATTCTAGGAAATTCACGTCAAAGTCAGT
GTTCACCCTTAACGAGGGAACTATAGTGTGGCGAAGCATCAACTCCCGCGTGCCAACCTTCAGTCTCGTCGCCCCGTTCACTGATCTCTCTCTCAGCGTGGTGACATTTG
GCAAGCAGCAGGTCTCCGGCGACTTCGTCTCCCTCTCTTCGTGTCGTCAGCCAGCTGCGTGGAGACCCACGACTCGAGGTTTCTCCTTCATTTATCGTGCGACCCGTGGG
GTAGATGTTCGATTTCTCTCCCTCTTTCTCGTTTGCGGCTGTGACATTGAACCCACAGGAACCCACAACGTTTTCTCCGTCTTCAATGGTGGACTGCAACATTCAGTGAA
AATTACTTGCAAGGTTGGTCGTACCCACACGATTCCAGCGGCTTTTGTAGATTATGCAGGAGATGAGCTTTATGTGTCCGGTGATGTAGATGAGGAGGTTGTTAAAAGTG
TAGGACCAGTGGTCTTCCTCGTTCTCCTCTCCATCACCAGTGGGTCTAGATTGTTGCCTTTGAGGTTAAGGTGTGATCTTTCGTTACCTTGGAAGGAGCTTATCTTGGCT
GCTTTAGGCTTGTTGGAGTTGCTTAGGAGTGTTATAGGTGCGGAACATGACGCGGAAATCATGTCTGTGATGGTGAGGGATTCATCTGAGAAAGGTGTTGCAAAAATTTT
GGTTCAGGCCATTTTACGCCGTTATGCTACTGAAAATTTTGGTACTTTCGGTTTAGAGTGGTTCAGTTCCGTGGTTAATGGTTTAAGGGTTGTAGTAGCGTCTCTAGGCT
AG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGACTACATGTTGGTGTATGGGGCTAAGGATTTGATCCTTATAGGATACACCGACTCTGACTTCCAGTCTGACAAGGATTCTAGGAAATTCACGTCAAAGTCAGT
GTTCACCCTTAACGAGGGAACTATAGTGTGGCGAAGCATCAACTCCCGCGTGCCAACCTTCAGTCTCGTCGCCCCGTTCACTGATCTCTCTCTCAGCGTGGTGACATTTG
GCAAGCAGCAGGTCTCCGGCGACTTCGTCTCCCTCTCTTCGTGTCGTCAGCCAGCTGCGTGGAGACCCACGACTCGAGGTTTCTCCTTCATTTATCGTGCGACCCGTGGG
GTAGATGTTCGATTTCTCTCCCTCTTTCTCGTTTGCGGCTGTGACATTGAACCCACAGGAACCCACAACGTTTTCTCCGTCTTCAATGGTGGACTGCAACATTCAGTGAA
AATTACTTGCAAGGTTGGTCGTACCCACACGATTCCAGCGGCTTTTGTAGATTATGCAGGAGATGAGCTTTATGTGTCCGGTGATGTAGATGAGGAGGTTGTTAAAAGTG
TAGGACCAGTGGTCTTCCTCGTTCTCCTCTCCATCACCAGTGGGTCTAGATTGTTGCCTTTGAGGTTAAGGTGTGATCTTTCGTTACCTTGGAAGGAGCTTATCTTGGCT
GCTTTAGGCTTGTTGGAGTTGCTTAGGAGTGTTATAGGTGCGGAACATGACGCGGAAATCATGTCTGTGATGGTGAGGGATTCATCTGAGAAAGGTGTTGCAAAAATTTT
GGTTCAGGCCATTTTACGCCGTTATGCTACTGAAAATTTTGGTACTTTCGGTTTAGAGTGGTTCAGTTCCGTGGTTAATGGTTTAAGGGTTGTAGTAGCGTCTCTAGGCT
AG
Protein sequenceShow/hide protein sequence
MRDYMLVYGAKDLILIGYTDSDFQSDKDSRKFTSKSVFTLNEGTIVWRSINSRVPTFSLVAPFTDLSLSVVTFGKQQVSGDFVSLSSCRQPAAWRPTTRGFSFIYRATRG
VDVRFLSLFLVCGCDIEPTGTHNVFSVFNGGLQHSVKITCKVGRTHTIPAAFVDYAGDELYVSGDVDEEVVKSVGPVVFLVLLSITSGSRLLPLRLRCDLSLPWKELILA
ALGLLELLRSVIGAEHDAEIMSVMVRDSSEKGVAKILVQAILRRYATENFGTFGLEWFSSVVNGLRVVVASLG